Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03591

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,015,015	+				+0.8
1,015,016	-				-1.5
1,015,016	-				+0.5
1,015,096	+				-0.9
1,015,096	+				+0.1
1,015,096	+				-0.6
1,015,096	+				+1.4
1,015,097	-				-1.1
1,015,097	-				-0.1
1,015,097	-				+0.1
1,015,097	-				+0.7
1,015,205	+		MPMX19_03590	0.18	-2.3
1,015,205	+		MPMX19_03590	0.18	-0.3
1,015,205	+		MPMX19_03590	0.18	-0.8
1,015,206	-		MPMX19_03590	0.18	+0.7
1,015,206	-		MPMX19_03590	0.18	-0.7
1,015,206	-		MPMX19_03590	0.18	+0.5
1,015,206	-		MPMX19_03590	0.18	-0.6
1,015,355	+		MPMX19_03590	0.52	-0.8
1,015,355	+		MPMX19_03590	0.52	-1.1
1,015,355	+		MPMX19_03590	0.52	-1.1
1,015,355	+		MPMX19_03590	0.52	+0.4
1,015,355	+		MPMX19_03590	0.52	-1.8
1,015,355	+		MPMX19_03590	0.52	-1.1
1,015,355	+		MPMX19_03590	0.52	-0.3
1,015,355	+		MPMX19_03590	0.52	-1.0
1,015,356	-		MPMX19_03590	0.52	-1.5
1,015,356	-		MPMX19_03590	0.52	+0.9
1,015,356	-		MPMX19_03590	0.52	-0.4
1,015,356	-		MPMX19_03590	0.52	-1.6
1,015,356	-		MPMX19_03590	0.52	-0.3
1,015,385	+		MPMX19_03590	0.59	-1.4
1,015,386	-		MPMX19_03590	0.59	-1.8
1,015,386	-		MPMX19_03590	0.59	-1.6
1,015,400	+		MPMX19_03590	0.62	+0.1
1,015,401	-		MPMX19_03590	0.62	+1.3
1,015,401	-		MPMX19_03590	0.62	+0.7
1,015,511	+		MPMX19_03590	0.87	-1.9
1,015,511	+		MPMX19_03590	0.87	-0.2
1,015,511	+		MPMX19_03590	0.87	-1.5
1,015,511	+		MPMX19_03590	0.87	-1.5
1,015,511	+		MPMX19_03590	0.87	-1.5
1,015,512	-		MPMX19_03590	0.87	-0.9
1,015,512	-		MPMX19_03590	0.87	-0.3
1,015,512	-		MPMX19_03590	0.87	-0.6
1,015,512	-		MPMX19_03590	0.87	+0.7
1,015,512	-		MPMX19_03590	0.87	-0.3
1,015,512	-		MPMX19_03590	0.87	-1.8
1,015,512	-		MPMX19_03590	0.87	-0.3
1,015,512	-		MPMX19_03590	0.87	-0.3
1,015,512	-		MPMX19_03590	0.87	-0.4
1,015,512	-		MPMX19_03590	0.87	-0.5
1,015,512	-		MPMX19_03590	0.87	+0.2
1,015,513	+		MPMX19_03590	0.88	-0.4
1,015,513	+		MPMX19_03590	0.88	-1.2
1,015,513	+		MPMX19_03590	0.88	-0.0
1,015,514	-		MPMX19_03590	0.88	-0.2
1,015,514	-		MPMX19_03590	0.88	+0.3
1,015,514	-		MPMX19_03590	0.88	-0.6
1,015,514	-		MPMX19_03590	0.88	-0.9
1,015,514	-		MPMX19_03590	0.88	-0.9
1,015,514	-		MPMX19_03590	0.88	-0.3
1,015,526	+				-0.8
1,015,527	-				-1.6
1,015,627	+				-0.6
1,015,629	+				-2.6
1,015,630	-				-1.6
1,015,649	+				-0.4
1,015,649	+				-0.2
1,015,649	+				-0.1
1,015,649	+				-1.5
1,015,650	-				+0.1
1,015,650	-				-0.5
1,015,665	+				-1.5
1,015,665	+				-0.1
1,015,665	+				-1.4
1,015,665	+				-0.6
1,015,665	+				-0.2
1,015,665	+				+0.5
1,015,665	+				-1.0
1,015,665	+				-1.1
1,015,665	+				+1.3
1,015,666	-				+0.0
1,015,666	-				-0.8
1,015,666	-				-0.6
1,015,666	-				+0.0
1,015,666	-				-0.3
1,015,666	-				-1.5
1,015,666	-				-0.4
1,015,666	-				-0.8
1,015,666	-				-1.2
1,015,667	+				+0.1
1,015,667	+				-0.6
1,015,667	+				-0.5
1,015,667	+				-0.6
1,015,668	-				-1.8
1,015,668	-				-0.4
1,015,774	+		MPMX19_03591	0.12	-0.4
1,015,933	+		MPMX19_03591	0.32	+0.5
1,015,933	+		MPMX19_03591	0.32	-1.2
1,015,933	+		MPMX19_03591	0.32	-2.1
1,015,934	-		MPMX19_03591	0.32	+1.0
1,015,934	-		MPMX19_03591	0.32	-1.0
1,015,934	-		MPMX19_03591	0.32	-2.0
1,015,934	-		MPMX19_03591	0.32	-1.8
1,015,934	-		MPMX19_03591	0.32	-1.0
1,015,934	-		MPMX19_03591	0.32	-1.3
1,016,015	-		MPMX19_03591	0.42	-0.4
1,016,188	+		MPMX19_03591	0.64	-0.9
1,016,188	+		MPMX19_03591	0.64	-0.3
1,016,188	+		MPMX19_03591	0.64	+0.1
1,016,188	+		MPMX19_03591	0.64	+0.5
1,016,189	-		MPMX19_03591	0.65	-1.0
1,016,365	+		MPMX19_03591	0.87	-0.4
1,016,366	-		MPMX19_03591	0.87	-0.9
1,016,366	-		MPMX19_03591	0.87	+0.8
1,016,366	-		MPMX19_03591	0.87	-0.1
1,016,517	+				+0.1
1,016,517	+				-1.5
1,016,518	-				+0.1
1,016,518	-				-0.2
1,016,518	-				-0.2
1,016,623	+				-0.4
1,016,623	+				-1.1
1,016,623	+				+0.1
1,016,673	-				-0.9
1,017,183	+		MPMX19_03592	0.30	-1.2
1,017,183	+		MPMX19_03592	0.30	-0.9