Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03174

Experiment: NL-CCM, start OD=0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_03173 and MPMX19_03174 are separated by 114 nucleotidesMPMX19_03174 and MPMX19_03175 are separated by 23 nucleotidesMPMX19_03175 and MPMX19_03176 are separated by 336 nucleotides MPMX19_03173: MPMX19_03173 - 16S ribosomal RNA, at 469,536 to 471,019 _03173 MPMX19_03174: MPMX19_03174 - tRNA-Ile, at 471,134 to 471,210 _03174 MPMX19_03175: MPMX19_03175 - tRNA-Ala, at 471,234 to 471,309 _03175 MPMX19_03176: MPMX19_03176 - 23S ribosomal RNA, at 471,646 to 474,379 _03176 Position (kb) 471 472Strain fitness (log2 ratio) -1 0 1at 471.021 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1
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471,021 + -0.5

Or see this region's nucleotide sequence