Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02873

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
122,260	+				-0.6
122,279	+				-3.0
122,280	-				-0.6
122,280	-				-0.3
122,280	-				-2.2
122,633	+		MPMX19_02872	0.43	+0.0
122,633	+		MPMX19_02872	0.43	+0.7
122,633	+		MPMX19_02872	0.43	-1.4
122,633	+		MPMX19_02872	0.43	-0.6
122,633	+		MPMX19_02872	0.43	-1.8
122,633	+		MPMX19_02872	0.43	+1.4
122,633	+		MPMX19_02872	0.43	+0.1
122,633	+		MPMX19_02872	0.43	-0.3
122,633	+		MPMX19_02872	0.43	+0.2
122,633	+		MPMX19_02872	0.43	-0.3
122,633	+		MPMX19_02872	0.43	-0.3
122,633	+		MPMX19_02872	0.43	+0.0
122,633	+		MPMX19_02872	0.43	-0.1
122,634	-		MPMX19_02872	0.43	+0.0
122,634	-		MPMX19_02872	0.43	+0.3
122,634	-		MPMX19_02872	0.43	-0.9
122,634	-		MPMX19_02872	0.43	-1.4
122,634	-		MPMX19_02872	0.43	-2.0
122,634	-		MPMX19_02872	0.43	+0.6
122,634	-		MPMX19_02872	0.43	-0.4
122,634	-		MPMX19_02872	0.43	-0.4
122,634	-		MPMX19_02872	0.43	+0.0
122,634	-		MPMX19_02872	0.43	-0.3
122,634	-		MPMX19_02872	0.43	-1.8
122,634	-		MPMX19_02872	0.43	+0.7
122,703	+		MPMX19_02872	0.52	+0.2
122,711	+		MPMX19_02872	0.53	+0.4
122,864	+		MPMX19_02872	0.71	+0.7
122,864	+		MPMX19_02872	0.71	-1.5
122,864	+		MPMX19_02872	0.71	+0.6
122,864	+		MPMX19_02872	0.71	-0.6
122,864	+		MPMX19_02872	0.71	+1.4
122,864	+		MPMX19_02872	0.71	-0.2
122,864	+		MPMX19_02872	0.71	-1.1
122,865	-		MPMX19_02872	0.72	+0.7
122,865	-		MPMX19_02872	0.72	+0.4
122,865	-		MPMX19_02872	0.72	+0.9
122,865	-		MPMX19_02872	0.72	+1.2
122,865	-		MPMX19_02872	0.72	+0.5
122,865	-		MPMX19_02872	0.72	-1.1
122,865	-		MPMX19_02872	0.72	-0.4
122,882	+		MPMX19_02872	0.74	-0.4
122,882	+		MPMX19_02872	0.74	-1.8
122,882	+		MPMX19_02872	0.74	-0.6
122,882	+		MPMX19_02872	0.74	+0.2
122,882	+		MPMX19_02872	0.74	-0.3
122,883	-		MPMX19_02872	0.74	+1.2
122,883	-		MPMX19_02872	0.74	-0.6
122,883	-		MPMX19_02872	0.74	-0.1
122,883	-		MPMX19_02872	0.74	-0.1
122,883	-		MPMX19_02872	0.74	+0.7
122,883	-		MPMX19_02872	0.74	-1.2
122,897	+		MPMX19_02872	0.76	-1.8
122,897	+		MPMX19_02872	0.76	-2.8
122,897	+		MPMX19_02872	0.76	-0.6
122,898	-		MPMX19_02872	0.76	-1.0
122,898	-		MPMX19_02872	0.76	+1.5
122,898	-		MPMX19_02872	0.76	-0.1
122,898	-		MPMX19_02872	0.76	+0.3
122,898	-		MPMX19_02872	0.76	+0.3
122,898	-		MPMX19_02872	0.76	-0.2
122,898	-		MPMX19_02872	0.76	-1.8
122,898	-		MPMX19_02872	0.76	+0.5
122,952	-		MPMX19_02872	0.82	-0.5
123,133	-				-0.6
123,133	-				+0.4
123,549	+		MPMX19_02873	0.29	+0.9
123,549	+		MPMX19_02873	0.29	-0.8
123,549	+		MPMX19_02873	0.29	-0.3
123,549	+		MPMX19_02873	0.29	-2.3
123,549	+		MPMX19_02873	0.29	-1.5
123,549	+		MPMX19_02873	0.29	-1.3
123,549	+		MPMX19_02873	0.29	+1.5
123,550	-		MPMX19_02873	0.29	-0.4
123,550	-		MPMX19_02873	0.29	-1.7
123,550	-		MPMX19_02873	0.29	+0.6
123,550	-		MPMX19_02873	0.29	+0.4
123,550	-		MPMX19_02873	0.29	+0.6
123,550	-		MPMX19_02873	0.29	+0.4
123,562	-		MPMX19_02873	0.30	+1.0
123,651	+		MPMX19_02873	0.39	+0.2
123,652	-		MPMX19_02873	0.39	-1.6
123,862	-		MPMX19_02873	0.60	-0.6
123,963	+		MPMX19_02873	0.70	-0.4
123,963	+		MPMX19_02873	0.70	-0.4
123,963	+		MPMX19_02873	0.70	-1.7
123,963	+		MPMX19_02873	0.70	+1.7
123,963	+		MPMX19_02873	0.70	+0.1
123,964	-		MPMX19_02873	0.70	+0.0
123,964	-		MPMX19_02873	0.70	-1.1
123,964	-		MPMX19_02873	0.70	+0.7
123,964	-		MPMX19_02873	0.70	+0.0
124,116	+		MPMX19_02873	0.85	+0.4
124,116	+		MPMX19_02873	0.85	+0.1
124,116	+		MPMX19_02873	0.85	-0.6
124,117	-		MPMX19_02873	0.86	+0.1
124,117	-		MPMX19_02873	0.86	-1.3
124,117	-		MPMX19_02873	0.86	+0.2
124,289	+				-1.7
124,289	+				-0.3
124,289	+				-1.0
124,289	+				-0.6
124,289	+				-0.6
124,290	-				+1.3
124,290	-				+0.3
124,290	-				-0.8
124,290	-				-1.8
124,290	-				-1.4
124,290	-				-1.6
124,290	-				-0.4
124,290	-				-1.7
124,304	+				+0.2
124,304	+				-1.0
124,305	-				-0.1
124,305	-				-0.7
124,305	-				-0.7
124,305	-				-2.1
124,305	-				+1.3
124,305	-				-1.6
124,305	-				-0.8
124,305	-				-0.8
124,305	-				-1.9
124,305	-				-0.6
124,305	-				+0.4
124,305	-				+0.1
124,305	-				-1.3
124,495	+		MPMX19_02874	0.36	+0.2
124,508	+		MPMX19_02874	0.38	+0.4
124,508	+		MPMX19_02874	0.38	-0.4
124,508	+		MPMX19_02874	0.38	+0.5
124,508	+		MPMX19_02874	0.38	+2.3
124,508	+		MPMX19_02874	0.38	-1.4
124,509	-		MPMX19_02874	0.39	-1.6
124,509	-		MPMX19_02874	0.39	+0.2
124,509	-		MPMX19_02874	0.39	+0.9
124,509	-		MPMX19_02874	0.39	+0.2
125,065	+				+0.7
125,065	+				-1.1
125,065	+				-1.6