Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02863

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
105,961	+		MPMX19_02861	0.84	+1.3
105,962	-		MPMX19_02861	0.84	-2.3
106,363	+		MPMX19_02862	0.59	-0.3
106,363	+		MPMX19_02862	0.59	+0.0
106,363	+		MPMX19_02862	0.59	-0.8
106,364	-		MPMX19_02862	0.59	+0.7
106,364	-		MPMX19_02862	0.59	-1.4
106,364	-		MPMX19_02862	0.59	-1.3
106,364	-		MPMX19_02862	0.59	+0.5
106,364	-		MPMX19_02862	0.59	-1.1
106,364	-		MPMX19_02862	0.59	-0.8
106,368	+		MPMX19_02862	0.60	-1.4
106,368	+		MPMX19_02862	0.60	-0.8
106,368	+		MPMX19_02862	0.60	-1.0
106,368	+		MPMX19_02862	0.60	+0.4
106,368	+		MPMX19_02862	0.60	-0.4
106,368	+		MPMX19_02862	0.60	-1.8
106,368	+		MPMX19_02862	0.60	-0.4
106,369	-		MPMX19_02862	0.61	-1.1
106,369	-		MPMX19_02862	0.61	+0.1
106,369	-		MPMX19_02862	0.61	-1.6
106,369	-		MPMX19_02862	0.61	-1.1
106,369	-		MPMX19_02862	0.61	-0.7
106,369	-		MPMX19_02862	0.61	+1.7
106,568	+				+1.7
106,568	+				-1.6
106,568	+				-1.8
106,568	+				-0.6
106,568	+				-2.3
106,568	+				-1.7
106,569	-				-1.1
106,569	-				-0.5
106,569	-				-1.3
106,569	-				+0.6
106,569	-				+0.5
106,569	-				+0.6
106,711	-				-0.7
106,870	+				-0.3
106,871	-				-0.4
106,882	-				-0.6
107,386	+		MPMX19_02863	0.20	-1.4
107,386	+		MPMX19_02863	0.20	+0.2
107,386	+		MPMX19_02863	0.20	-0.5
107,386	+		MPMX19_02863	0.20	+0.0
107,386	+		MPMX19_02863	0.20	-0.4
107,386	+		MPMX19_02863	0.20	-2.0
107,386	+		MPMX19_02863	0.20	-1.4
107,386	+		MPMX19_02863	0.20	-0.3
107,386	+		MPMX19_02863	0.20	+1.0
107,387	-		MPMX19_02863	0.20	+0.2
107,387	-		MPMX19_02863	0.20	+0.2
107,387	-		MPMX19_02863	0.20	-0.3
107,387	-		MPMX19_02863	0.20	-1.3
107,387	-		MPMX19_02863	0.20	+0.0
107,387	-		MPMX19_02863	0.20	+0.5
107,387	-		MPMX19_02863	0.20	-0.4
107,387	-		MPMX19_02863	0.20	+1.0
107,387	-		MPMX19_02863	0.20	-0.5
107,387	-		MPMX19_02863	0.20	+2.2
107,387	-		MPMX19_02863	0.20	-0.6
107,387	-		MPMX19_02863	0.20	-0.4
107,387	-		MPMX19_02863	0.20	-1.6
107,387	-		MPMX19_02863	0.20	-0.3
107,416	+		MPMX19_02863	0.21	-0.2
107,416	+		MPMX19_02863	0.21	-0.9
107,417	-		MPMX19_02863	0.21	-1.0
107,417	-		MPMX19_02863	0.21	+0.5
107,417	-		MPMX19_02863	0.21	+1.2
107,417	-		MPMX19_02863	0.21	-1.1
107,581	+		MPMX19_02863	0.28	-1.7
107,581	+		MPMX19_02863	0.28	-0.2
107,581	+		MPMX19_02863	0.28	-0.6
107,581	+		MPMX19_02863	0.28	+1.4
107,581	+		MPMX19_02863	0.28	+1.1
107,581	+		MPMX19_02863	0.28	-0.5
107,581	+		MPMX19_02863	0.28	-0.8
107,581	+		MPMX19_02863	0.28	+0.5
107,581	+		MPMX19_02863	0.28	-0.8
107,582	-		MPMX19_02863	0.28	-0.6
107,647	+		MPMX19_02863	0.31	-0.9
107,647	+		MPMX19_02863	0.31	-2.2
107,647	+		MPMX19_02863	0.31	-1.2
107,647	+		MPMX19_02863	0.31	+1.3
107,647	+		MPMX19_02863	0.31	-0.6
107,647	+		MPMX19_02863	0.31	-0.7
107,648	-		MPMX19_02863	0.31	+0.1
107,648	-		MPMX19_02863	0.31	+0.0
107,648	-		MPMX19_02863	0.31	-0.7
107,648	-		MPMX19_02863	0.31	-0.3
107,648	-		MPMX19_02863	0.31	-1.4
107,755	+		MPMX19_02863	0.36	+0.3
107,755	+		MPMX19_02863	0.36	-1.1
107,755	+		MPMX19_02863	0.36	+0.4
107,755	+		MPMX19_02863	0.36	+0.1
107,755	+		MPMX19_02863	0.36	-0.1
107,756	-		MPMX19_02863	0.36	+1.2
107,756	-		MPMX19_02863	0.36	-0.3
107,756	-		MPMX19_02863	0.36	-0.1
107,756	-		MPMX19_02863	0.36	-0.3
107,756	-		MPMX19_02863	0.36	-0.6
107,756	-		MPMX19_02863	0.36	+0.0
107,756	-		MPMX19_02863	0.36	-1.7
107,756	-		MPMX19_02863	0.36	-1.2
107,843	-		MPMX19_02863	0.39	-2.2
107,866	+		MPMX19_02863	0.40	+0.4
107,866	+		MPMX19_02863	0.40	-1.7
107,866	+		MPMX19_02863	0.40	-1.1
107,866	+		MPMX19_02863	0.40	-0.1
107,866	+		MPMX19_02863	0.40	+0.7
107,866	+		MPMX19_02863	0.40	-0.6
107,866	+		MPMX19_02863	0.40	+1.7
107,866	+		MPMX19_02863	0.40	+0.2
107,866	+		MPMX19_02863	0.40	-1.1
107,866	+		MPMX19_02863	0.40	+1.2
107,866	+		MPMX19_02863	0.40	-0.1
107,866	+		MPMX19_02863	0.40	+0.5
107,866	+		MPMX19_02863	0.40	+0.9
107,866	+		MPMX19_02863	0.40	-0.9
107,866	+		MPMX19_02863	0.40	-0.8
107,866	+		MPMX19_02863	0.40	-0.3
107,866	+		MPMX19_02863	0.40	-0.8
107,867	-		MPMX19_02863	0.41	+0.2
107,867	-		MPMX19_02863	0.41	-0.5
107,867	-		MPMX19_02863	0.41	-1.2
107,867	-		MPMX19_02863	0.41	-1.4
107,867	-		MPMX19_02863	0.41	-1.3
107,867	-		MPMX19_02863	0.41	-0.6
107,867	-		MPMX19_02863	0.41	+0.3
107,867	-		MPMX19_02863	0.41	-0.7
107,867	-		MPMX19_02863	0.41	+0.4
107,867	-		MPMX19_02863	0.41	+0.6
107,867	-		MPMX19_02863	0.41	-0.3
107,953	+		MPMX19_02863	0.44	-1.8
107,954	-		MPMX19_02863	0.44	-0.0
107,977	+		MPMX19_02863	0.45	+1.7
107,978	-		MPMX19_02863	0.45	-0.4
108,063	+		MPMX19_02863	0.49	-0.1
108,063	+		MPMX19_02863	0.49	+0.7
108,063	+		MPMX19_02863	0.49	+1.5
108,063	+		MPMX19_02863	0.49	+0.2
108,063	+		MPMX19_02863	0.49	+1.3
108,063	+		MPMX19_02863	0.49	-0.3
108,063	+		MPMX19_02863	0.49	+0.3
108,063	+		MPMX19_02863	0.49	-1.1
108,063	+		MPMX19_02863	0.49	-0.6
108,063	+		MPMX19_02863	0.49	+0.9
108,063	+		MPMX19_02863	0.49	+0.9
108,063	+		MPMX19_02863	0.49	-0.1
108,063	+		MPMX19_02863	0.49	-0.4
108,063	+		MPMX19_02863	0.49	+0.2
108,063	+		MPMX19_02863	0.49	+0.7
108,063	+		MPMX19_02863	0.49	+1.5
108,063	+		MPMX19_02863	0.49	+0.3
108,063	+		MPMX19_02863	0.49	-0.3
108,063	+		MPMX19_02863	0.49	-0.4
108,063	+		MPMX19_02863	0.49	-0.6
108,064	-		MPMX19_02863	0.49	+0.2
108,064	-		MPMX19_02863	0.49	-1.2
108,064	-		MPMX19_02863	0.49	-0.3
108,064	-		MPMX19_02863	0.49	-1.3
108,064	-		MPMX19_02863	0.49	+0.2
108,064	-		MPMX19_02863	0.49	-1.1
108,064	-		MPMX19_02863	0.49	-0.2
108,064	-		MPMX19_02863	0.49	-0.7
108,064	-		MPMX19_02863	0.49	+0.5
108,064	-		MPMX19_02863	0.49	-1.1
108,064	-		MPMX19_02863	0.49	+0.4
108,064	-		MPMX19_02863	0.49	+0.6
108,064	-		MPMX19_02863	0.49	-1.4
108,064	-		MPMX19_02863	0.49	-0.4
108,064	-		MPMX19_02863	0.49	-0.3
108,067	+		MPMX19_02863	0.49	+0.2
108,067	+		MPMX19_02863	0.49	+0.2
108,067	+		MPMX19_02863	0.49	-0.3
108,068	-		MPMX19_02863	0.49	+1.9
108,068	-		MPMX19_02863	0.49	-0.0
108,068	-		MPMX19_02863	0.49	+0.1
108,068	-		MPMX19_02863	0.49	+1.4
108,068	-		MPMX19_02863	0.49	-0.6
108,193	+		MPMX19_02863	0.55	+0.6
108,193	+		MPMX19_02863	0.55	-0.2
108,193	+		MPMX19_02863	0.55	+0.8
108,193	+		MPMX19_02863	0.55	-2.0
108,193	+		MPMX19_02863	0.55	-0.4
108,193	+		MPMX19_02863	0.55	+0.3
108,193	+		MPMX19_02863	0.55	-0.6
108,193	+		MPMX19_02863	0.55	+0.2
108,193	+		MPMX19_02863	0.55	-0.7
108,193	+		MPMX19_02863	0.55	-0.6
108,194	-		MPMX19_02863	0.55	-0.1
108,194	-		MPMX19_02863	0.55	-0.7
108,194	-		MPMX19_02863	0.55	+0.6
108,194	-		MPMX19_02863	0.55	-0.1
108,194	-		MPMX19_02863	0.55	+0.3
108,194	-		MPMX19_02863	0.55	+0.5
108,194	-		MPMX19_02863	0.55	-1.8
108,194	-		MPMX19_02863	0.55	-0.7
108,271	+		MPMX19_02863	0.58	+0.6
108,271	+		MPMX19_02863	0.58	-0.7
108,271	+		MPMX19_02863	0.58	+0.0
108,271	+		MPMX19_02863	0.58	+0.7
108,271	+		MPMX19_02863	0.58	+1.7
108,272	-		MPMX19_02863	0.58	-0.4
108,272	-		MPMX19_02863	0.58	+0.1
108,295	+		MPMX19_02863	0.59	-1.6
108,296	-		MPMX19_02863	0.59	+0.7
108,296	-		MPMX19_02863	0.59	-2.5
108,406	+		MPMX19_02863	0.64	+0.3
108,407	-		MPMX19_02863	0.64	-0.6
108,407	-		MPMX19_02863	0.64	+0.2
108,496	+		MPMX19_02863	0.68	+0.6
108,496	+		MPMX19_02863	0.68	-1.3
108,496	+		MPMX19_02863	0.68	-0.8
108,496	+		MPMX19_02863	0.68	-2.0
108,496	+		MPMX19_02863	0.68	-1.3
108,496	+		MPMX19_02863	0.68	+0.3
108,496	+		MPMX19_02863	0.68	+0.7
108,496	+		MPMX19_02863	0.68	+0.7
108,496	+		MPMX19_02863	0.68	-0.6
108,496	+		MPMX19_02863	0.68	-1.3
108,496	+		MPMX19_02863	0.68	-0.3
108,496	+		MPMX19_02863	0.68	-0.8
108,497	-		MPMX19_02863	0.68	-0.8
108,497	-		MPMX19_02863	0.68	+0.2
108,497	-		MPMX19_02863	0.68	-2.6
108,497	-		MPMX19_02863	0.68	+0.7
108,497	-		MPMX19_02863	0.68	-0.6
108,497	-		MPMX19_02863	0.68	+0.2
108,497	-		MPMX19_02863	0.68	+0.1
108,497	-		MPMX19_02863	0.68	-2.0
108,497	-		MPMX19_02863	0.68	-0.3
108,523	+		MPMX19_02863	0.69	+0.2
108,523	+		MPMX19_02863	0.69	+1.3
108,523	+		MPMX19_02863	0.69	-0.5
108,524	-		MPMX19_02863	0.69	-0.8
108,524	-		MPMX19_02863	0.69	+0.6
108,532	+		MPMX19_02863	0.69	+0.9
108,532	+		MPMX19_02863	0.69	-0.6
108,533	-		MPMX19_02863	0.69	-1.2
108,544	+		MPMX19_02863	0.70	-0.8
108,544	+		MPMX19_02863	0.70	+2.0
108,545	-		MPMX19_02863	0.70	+0.2
108,545	-		MPMX19_02863	0.70	-1.3
108,545	-		MPMX19_02863	0.70	+0.2
108,545	-		MPMX19_02863	0.70	-0.8
108,545	-		MPMX19_02863	0.70	+0.4
108,545	-		MPMX19_02863	0.70	-0.7
108,545	-		MPMX19_02863	0.70	-1.1
108,727	+		MPMX19_02863	0.78	-0.2
108,727	+		MPMX19_02863	0.78	+1.0
108,727	+		MPMX19_02863	0.78	-0.1
108,727	+		MPMX19_02863	0.78	-0.8
108,727	+		MPMX19_02863	0.78	-2.3
108,728	-		MPMX19_02863	0.78	-1.3
108,728	-		MPMX19_02863	0.78	-0.6
108,728	-		MPMX19_02863	0.78	-0.6
108,728	-		MPMX19_02863	0.78	-1.6
108,728	-		MPMX19_02863	0.78	-1.4
108,728	-		MPMX19_02863	0.78	-0.7
108,728	-		MPMX19_02863	0.78	+0.1
108,847	+		MPMX19_02863	0.83	-1.4
108,847	+		MPMX19_02863	0.83	-1.0
108,847	+		MPMX19_02863	0.83	+1.0
108,848	-		MPMX19_02863	0.83	+0.9
108,856	+		MPMX19_02863	0.84	+0.3
108,856	+		MPMX19_02863	0.84	+1.9
108,856	+		MPMX19_02863	0.84	-0.3
108,856	+		MPMX19_02863	0.84	-0.5
108,856	+		MPMX19_02863	0.84	-0.5
108,856	+		MPMX19_02863	0.84	-0.8
108,856	+		MPMX19_02863	0.84	-1.8
108,856	+		MPMX19_02863	0.84	+0.2
108,856	+		MPMX19_02863	0.84	-2.8
108,856	+		MPMX19_02863	0.84	-0.1
108,856	+		MPMX19_02863	0.84	-0.2
108,856	+		MPMX19_02863	0.84	+0.9
108,856	+		MPMX19_02863	0.84	+0.9
108,857	-		MPMX19_02863	0.84	-0.4
108,857	-		MPMX19_02863	0.84	+0.2
108,857	-		MPMX19_02863	0.84	+0.7
108,857	-		MPMX19_02863	0.84	-1.1
108,857	-		MPMX19_02863	0.84	-0.5
108,857	-		MPMX19_02863	0.84	-0.3
108,857	-		MPMX19_02863	0.84	-0.5
108,857	-		MPMX19_02863	0.84	-1.1
108,857	-		MPMX19_02863	0.84	+0.1
108,857	-		MPMX19_02863	0.84	+2.6
108,857	-		MPMX19_02863	0.84	+0.4
108,857	-		MPMX19_02863	0.84	-0.4
108,857	-		MPMX19_02863	0.84	-0.3
108,857	-		MPMX19_02863	0.84	+0.2
108,857	-		MPMX19_02863	0.84	-0.6
108,857	-		MPMX19_02863	0.84	-2.1
108,862	+		MPMX19_02863	0.84	+0.3
108,862	+		MPMX19_02863	0.84	+0.4
108,862	+		MPMX19_02863	0.84	-1.5
108,863	-		MPMX19_02863	0.84	-0.1
108,863	-		MPMX19_02863	0.84	+0.7
108,863	-		MPMX19_02863	0.84	-0.8
108,863	-		MPMX19_02863	0.84	+0.0
108,863	-		MPMX19_02863	0.84	+0.2
108,961	+		MPMX19_02863	0.88	-1.0
108,961	+		MPMX19_02863	0.88	+0.2
108,961	+		MPMX19_02863	0.88	+0.2
108,961	+		MPMX19_02863	0.88	-2.2
108,961	+		MPMX19_02863	0.88	-0.6
108,961	+		MPMX19_02863	0.88	+0.1
108,961	+		MPMX19_02863	0.88	-1.3
108,961	+		MPMX19_02863	0.88	+0.8
108,962	-		MPMX19_02863	0.88	+0.3
108,962	-		MPMX19_02863	0.88	-0.8
108,962	-		MPMX19_02863	0.88	-0.1
108,962	-		MPMX19_02863	0.88	-0.3
108,962	-		MPMX19_02863	0.88	-1.5
109,063	+				-0.8
109,063	+				-1.3
109,063	+				-0.3
109,064	-				-1.3
109,064	-				-1.6
109,093	+				+0.5
109,094	-				-1.0
109,129	+				-1.3
109,153	+				-0.9
109,153	+				-1.1
109,153	+				-0.2
109,153	+				-1.2
109,153	+				-1.0
109,153	+				-0.1
109,154	-				-1.1
109,154	-				-0.3
109,154	-				+0.7
109,154	-				+0.4
109,154	-				+0.3
109,154	-				-1.8
109,154	-				-0.3
109,154	-				+1.7
109,154	-				+0.6
109,154	-				-1.4
109,154	-				-1.3
109,154	-				-0.6
109,300	+				-0.2
109,300	+				-1.3
109,300	+				-0.6
109,301	-				+0.5
109,301	-				+1.5
109,301	-				+0.9
109,301	-				-1.0
109,301	-				-1.5
109,301	-				-0.6
109,592	+		MPMX19_02864	0.40	-0.8
109,592	+		MPMX19_02864	0.40	+1.2
109,592	+		MPMX19_02864	0.40	+0.2
109,592	+		MPMX19_02864	0.40	+1.3
109,592	+		MPMX19_02864	0.40	-1.6
109,592	+		MPMX19_02864	0.40	+0.6
109,592	+		MPMX19_02864	0.40	+0.2
109,593	-		MPMX19_02864	0.40	-1.1
109,593	-		MPMX19_02864	0.40	-0.7
109,593	-		MPMX19_02864	0.40	-2.2
109,593	-		MPMX19_02864	0.40	-0.3
109,593	-		MPMX19_02864	0.40	+0.5
109,593	-		MPMX19_02864	0.40	-0.3
109,593	-		MPMX19_02864	0.40	+0.7
109,593	-		MPMX19_02864	0.40	+0.7
109,593	-		MPMX19_02864	0.40	-0.6
109,593	-		MPMX19_02864	0.40	+0.1
109,593	-		MPMX19_02864	0.40	-0.1
109,593	-		MPMX19_02864	0.40	-0.5
109,598	+		MPMX19_02864	0.41	+2.1
109,599	-		MPMX19_02864	0.41	-1.4
109,697	+		MPMX19_02864	0.55	+1.5
109,697	+		MPMX19_02864	0.55	-0.3
109,697	+		MPMX19_02864	0.55	+0.2
109,697	+		MPMX19_02864	0.55	-1.3
109,697	+		MPMX19_02864	0.55	+0.4
109,697	+		MPMX19_02864	0.55	-0.3
109,697	+		MPMX19_02864	0.55	+0.2
109,698	-		MPMX19_02864	0.56	-0.1
109,698	-		MPMX19_02864	0.56	-1.2
109,730	+		MPMX19_02864	0.60	+0.2
109,730	+		MPMX19_02864	0.60	-0.4
109,730	+		MPMX19_02864	0.60	-0.5
109,730	+		MPMX19_02864	0.60	+0.2
109,730	+		MPMX19_02864	0.60	+0.7
109,730	+		MPMX19_02864	0.60	+0.3
109,730	+		MPMX19_02864	0.60	-0.5
109,731	-		MPMX19_02864	0.60	-0.4
109,731	-		MPMX19_02864	0.60	+0.5
109,731	-		MPMX19_02864	0.60	-0.3
109,731	-		MPMX19_02864	0.60	-1.2
109,731	-		MPMX19_02864	0.60	-1.0
109,731	-		MPMX19_02864	0.60	+0.0
109,731	-		MPMX19_02864	0.60	+0.4
109,775	+		MPMX19_02864	0.67	+1.5
109,776	-		MPMX19_02864	0.67	-2.6
109,776	-		MPMX19_02864	0.67	-1.1
109,886	+		MPMX19_02864	0.83	-0.0
109,887	-		MPMX19_02864	0.83	-1.4
109,887	-		MPMX19_02864	0.83	+0.1
109,887	-		MPMX19_02864	0.83	+0.1
109,887	-		MPMX19_02864	0.83	-1.5
109,887	-		MPMX19_02864	0.83	+1.0
109,967	+				-0.4
109,967	+				-1.8
109,968	-				+0.2
110,221	+		MPMX19_02865	0.31	-0.1