Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02813

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
48,643	-		MPMX19_02812	0.41	-1.0
48,678	+		MPMX19_02812	0.45	-1.1
48,679	-		MPMX19_02812	0.45	+1.6
48,679	-		MPMX19_02812	0.45	+0.3
48,684	+		MPMX19_02812	0.46	-0.8
48,684	+		MPMX19_02812	0.46	-0.7
48,684	+		MPMX19_02812	0.46	+1.2
48,684	+		MPMX19_02812	0.46	+0.6
48,684	+		MPMX19_02812	0.46	-0.6
48,684	+		MPMX19_02812	0.46	-0.7
48,684	+		MPMX19_02812	0.46	-1.3
48,684	+		MPMX19_02812	0.46	+0.2
48,684	+		MPMX19_02812	0.46	+0.7
48,685	-		MPMX19_02812	0.46	-1.3
48,685	-		MPMX19_02812	0.46	-0.4
48,685	-		MPMX19_02812	0.46	-1.3
48,685	-		MPMX19_02812	0.46	+1.4
48,685	-		MPMX19_02812	0.46	+0.2
48,685	-		MPMX19_02812	0.46	-0.1
48,685	-		MPMX19_02812	0.46	+0.2
49,023	+		MPMX19_02812	0.83	+0.5
49,023	+		MPMX19_02812	0.83	-0.5
49,023	+		MPMX19_02812	0.83	-0.8
49,024	-		MPMX19_02812	0.83	+0.6
49,024	-		MPMX19_02812	0.83	+0.8
49,024	-		MPMX19_02812	0.83	-1.3
49,024	-		MPMX19_02812	0.83	-0.6
49,155	+				-0.4
49,155	+				-2.1
49,156	-				-0.3
49,156	-				+2.1
49,328	+				-0.1
49,328	+				-0.3
49,328	+				+0.3
49,328	+				+0.1
49,328	+				-0.3
49,328	+				-0.6
49,328	+				+0.2
49,328	+				-2.7
49,329	-				+0.2
49,329	-				-0.5
49,329	-				+0.4
49,329	-				-0.6
49,329	-				+0.7
49,329	-				-2.2
49,329	-				-2.2
49,329	-				+0.0
49,329	-				-1.0
49,574	+		MPMX19_02813	0.21	-0.7
49,574	+		MPMX19_02813	0.21	-0.3
49,574	+		MPMX19_02813	0.21	+0.0
49,574	+		MPMX19_02813	0.21	+0.5
49,575	-		MPMX19_02813	0.21	-0.6
49,575	-		MPMX19_02813	0.21	+0.3
49,575	-		MPMX19_02813	0.21	+0.0
49,589	+		MPMX19_02813	0.22	-1.1
49,589	+		MPMX19_02813	0.22	-1.7
49,589	+		MPMX19_02813	0.22	+0.2
49,590	-		MPMX19_02813	0.22	+0.4
49,616	+		MPMX19_02813	0.24	+0.2
49,616	+		MPMX19_02813	0.24	+0.6
49,620	-		MPMX19_02813	0.24	-0.5
49,661	+		MPMX19_02813	0.27	+0.4
49,661	+		MPMX19_02813	0.27	-0.9
49,661	+		MPMX19_02813	0.27	+1.0
49,661	+		MPMX19_02813	0.27	-0.7
49,661	+		MPMX19_02813	0.27	+0.3
49,661	+		MPMX19_02813	0.27	-1.5
49,661	+		MPMX19_02813	0.27	+0.2
49,661	+		MPMX19_02813	0.27	-2.0
49,661	+		MPMX19_02813	0.27	-1.0
49,662	-		MPMX19_02813	0.27	-1.3
49,662	-		MPMX19_02813	0.27	-0.4
49,662	-		MPMX19_02813	0.27	-0.6
49,662	-		MPMX19_02813	0.27	-0.6
49,662	-		MPMX19_02813	0.27	-1.3
49,662	-		MPMX19_02813	0.27	-0.2
49,662	-		MPMX19_02813	0.27	+0.9
49,691	+		MPMX19_02813	0.29	+0.4
49,691	+		MPMX19_02813	0.29	-0.1
49,691	+		MPMX19_02813	0.29	-0.1
49,691	+		MPMX19_02813	0.29	-1.8
49,691	+		MPMX19_02813	0.29	+0.2
49,691	+		MPMX19_02813	0.29	+1.0
49,691	+		MPMX19_02813	0.29	-1.1
49,692	-		MPMX19_02813	0.30	+0.7
49,692	-		MPMX19_02813	0.30	+0.3
49,692	-		MPMX19_02813	0.30	-0.8
49,692	-		MPMX19_02813	0.30	-0.5
49,692	-		MPMX19_02813	0.30	+0.0
49,692	-		MPMX19_02813	0.30	-0.0
49,692	-		MPMX19_02813	0.30	-1.3
49,692	-		MPMX19_02813	0.30	-2.1
49,692	-		MPMX19_02813	0.30	-0.3
49,692	-		MPMX19_02813	0.30	+0.3
49,778	+		MPMX19_02813	0.36	+0.2
49,778	+		MPMX19_02813	0.36	-0.7
49,778	+		MPMX19_02813	0.36	-0.8
49,778	+		MPMX19_02813	0.36	+1.2
49,778	+		MPMX19_02813	0.36	-0.4
49,778	+		MPMX19_02813	0.36	-1.3
49,778	+		MPMX19_02813	0.36	-0.6
49,778	+		MPMX19_02813	0.36	-1.3
49,778	+		MPMX19_02813	0.36	-0.1
49,778	+		MPMX19_02813	0.36	+2.1
49,778	+		MPMX19_02813	0.36	-1.1
49,779	-		MPMX19_02813	0.36	-0.6
49,779	-		MPMX19_02813	0.36	-1.7
49,779	-		MPMX19_02813	0.36	+0.4
49,779	-		MPMX19_02813	0.36	+0.3
49,779	-		MPMX19_02813	0.36	-2.0
49,779	-		MPMX19_02813	0.36	-2.6
49,779	-		MPMX19_02813	0.36	-0.4
49,779	-		MPMX19_02813	0.36	-0.8
49,781	+		MPMX19_02813	0.36	-1.6
49,781	+		MPMX19_02813	0.36	-0.8
49,781	+		MPMX19_02813	0.36	+0.2
49,781	+		MPMX19_02813	0.36	+0.0
49,781	+		MPMX19_02813	0.36	-0.7
49,781	+		MPMX19_02813	0.36	-0.8
49,781	+		MPMX19_02813	0.36	+0.3
49,781	+		MPMX19_02813	0.36	-0.3
49,781	+		MPMX19_02813	0.36	-0.8
49,781	+		MPMX19_02813	0.36	+0.5
49,781	+		MPMX19_02813	0.36	-1.1
49,781	+		MPMX19_02813	0.36	+0.7
49,782	-		MPMX19_02813	0.36	-1.0
49,782	-		MPMX19_02813	0.36	-0.0
49,782	-		MPMX19_02813	0.36	+0.1
49,782	-		MPMX19_02813	0.36	-0.6
49,782	-		MPMX19_02813	0.36	-0.2
49,782	-		MPMX19_02813	0.36	-0.0
49,782	-		MPMX19_02813	0.36	+0.2
49,782	-		MPMX19_02813	0.36	-1.0
49,782	-		MPMX19_02813	0.36	-3.0
49,782	-		MPMX19_02813	0.36	-0.7
49,811	+		MPMX19_02813	0.38	-0.1
49,811	+		MPMX19_02813	0.38	+0.0
49,811	+		MPMX19_02813	0.38	-0.3
49,811	+		MPMX19_02813	0.38	+1.3
49,811	+		MPMX19_02813	0.38	+1.5
49,812	-		MPMX19_02813	0.38	+0.7
49,812	-		MPMX19_02813	0.38	-0.5
49,925	+		MPMX19_02813	0.46	+0.7
49,925	+		MPMX19_02813	0.46	-1.8
49,925	+		MPMX19_02813	0.46	+0.2
49,925	+		MPMX19_02813	0.46	-1.6
49,925	+		MPMX19_02813	0.46	+0.0
49,926	-		MPMX19_02813	0.46	-1.6
50,069	+		MPMX19_02813	0.56	-1.0
50,069	+		MPMX19_02813	0.56	-0.7
50,069	+		MPMX19_02813	0.56	-1.7
50,069	+		MPMX19_02813	0.56	-0.4
50,069	+		MPMX19_02813	0.56	+1.3
50,069	+		MPMX19_02813	0.56	+0.4
50,069	+		MPMX19_02813	0.56	-2.2
50,069	+		MPMX19_02813	0.56	-1.1
50,069	+		MPMX19_02813	0.56	-0.1
50,069	+		MPMX19_02813	0.56	-0.1
50,070	-		MPMX19_02813	0.56	+1.7
50,070	-		MPMX19_02813	0.56	-1.0
50,070	-		MPMX19_02813	0.56	+0.7
50,070	-		MPMX19_02813	0.56	-0.1
50,070	-		MPMX19_02813	0.56	-0.4
50,132	+		MPMX19_02813	0.61	+0.2
50,132	+		MPMX19_02813	0.61	-0.8
50,132	+		MPMX19_02813	0.61	-0.3
50,132	+		MPMX19_02813	0.61	+0.8
50,132	+		MPMX19_02813	0.61	-0.6
50,133	-		MPMX19_02813	0.61	-1.4
50,133	-		MPMX19_02813	0.61	+0.4
50,133	-		MPMX19_02813	0.61	-0.8
50,133	-		MPMX19_02813	0.61	-0.1
50,133	-		MPMX19_02813	0.61	-0.0
50,133	-		MPMX19_02813	0.61	-1.2
50,159	+		MPMX19_02813	0.62	-1.1
50,294	+		MPMX19_02813	0.72	-0.1
50,294	+		MPMX19_02813	0.72	+0.2
50,294	+		MPMX19_02813	0.72	-1.4
50,294	+		MPMX19_02813	0.72	-1.0
50,295	-		MPMX19_02813	0.72	+0.2
50,546	+		MPMX19_02813	0.90	-1.0
50,546	+		MPMX19_02813	0.90	-0.5
50,546	+		MPMX19_02813	0.90	+1.2
50,546	+		MPMX19_02813	0.90	-0.7
50,546	+		MPMX19_02813	0.90	-2.0
50,546	+		MPMX19_02813	0.90	+0.3
50,547	-		MPMX19_02813	0.90	+0.4
50,547	-		MPMX19_02813	0.90	+1.4
50,564	+				-2.7
50,582	+				-0.6
50,582	+				-1.2
50,582	+				+0.7
50,582	+				-1.1
50,582	+				-0.7
50,582	+				-0.1
50,582	+				-1.7
50,582	+				-0.3
50,582	+				-1.4
50,582	+				+0.0
50,582	+				-1.3
50,582	+				-0.9
50,582	+				-0.8
50,582	+				-1.6
50,582	+				-0.1
50,582	+				-0.1
50,583	-				+0.4
50,583	-				-0.4
50,583	-				-0.3
50,583	-				-0.6
50,583	-				+0.6
50,583	-				-0.7
50,583	-				-0.4
50,583	-				-0.1
50,583	-				-0.3
50,583	-				-0.3
50,583	-				-0.6
50,583	-				-1.5
50,583	-				+0.2
50,583	-				-1.8
50,583	-				-0.8
50,583	-				-0.6
50,583	-				+1.2
50,828	-		MPMX19_02814	0.11	-1.2
50,828	-		MPMX19_02814	0.11	-0.8
50,828	-		MPMX19_02814	0.11	-1.8
50,828	-		MPMX19_02814	0.11	+0.1
50,828	-		MPMX19_02814	0.11	+1.6
50,828	-		MPMX19_02814	0.11	-1.4
50,828	-		MPMX19_02814	0.11	+0.7
50,828	-		MPMX19_02814	0.11	-1.6
50,828	-		MPMX19_02814	0.11	+0.2
50,944	+		MPMX19_02814	0.20	-1.3
50,944	+		MPMX19_02814	0.20	-0.1
50,944	+		MPMX19_02814	0.20	+0.3
50,945	-		MPMX19_02814	0.20	-0.5
50,945	-		MPMX19_02814	0.20	-1.8
50,945	-		MPMX19_02814	0.20	-1.1
51,070	+		MPMX19_02814	0.30	-1.5
51,070	+		MPMX19_02814	0.30	-1.6
51,071	-		MPMX19_02814	0.30	+0.6
51,071	-		MPMX19_02814	0.30	+0.2
51,071	-		MPMX19_02814	0.30	+0.0
51,071	-		MPMX19_02814	0.30	-0.3
51,071	-		MPMX19_02814	0.30	+0.0
51,375	+		MPMX19_02814	0.54	-1.8
51,375	+		MPMX19_02814	0.54	-0.3
51,375	+		MPMX19_02814	0.54	+0.3
51,375	+		MPMX19_02814	0.54	+0.9
51,375	+		MPMX19_02814	0.54	+0.1
51,375	+		MPMX19_02814	0.54	-0.3
51,375	+		MPMX19_02814	0.54	-1.6
51,375	+		MPMX19_02814	0.54	-0.8
51,375	+		MPMX19_02814	0.54	+0.9
51,375	+		MPMX19_02814	0.54	+1.3
51,376	-		MPMX19_02814	0.54	-0.3
51,376	-		MPMX19_02814	0.54	-0.1
51,376	-		MPMX19_02814	0.54	-0.3
51,376	-		MPMX19_02814	0.54	-0.5
51,376	-		MPMX19_02814	0.54	-1.3
51,376	-		MPMX19_02814	0.54	-1.8
51,376	-		MPMX19_02814	0.54	+0.6
51,376	-		MPMX19_02814	0.54	+0.0
51,376	-		MPMX19_02814	0.54	+0.2
51,376	-		MPMX19_02814	0.54	+0.2
51,376	-		MPMX19_02814	0.54	+0.4
51,376	-		MPMX19_02814	0.54	-1.8
51,376	-		MPMX19_02814	0.54	-0.6
51,376	-		MPMX19_02814	0.54	-1.3
51,418	+		MPMX19_02814	0.58	-1.0
51,418	+		MPMX19_02814	0.58	-0.8
51,419	-		MPMX19_02814	0.58	-0.3
51,419	-		MPMX19_02814	0.58	-0.1
51,446	-		MPMX19_02814	0.60	-1.3
51,613	+		MPMX19_02814	0.73	-0.5
51,613	+		MPMX19_02814	0.73	-0.7
51,613	+		MPMX19_02814	0.73	+0.3
51,613	+		MPMX19_02814	0.73	+1.0
51,613	+		MPMX19_02814	0.73	-0.3
51,614	-		MPMX19_02814	0.73	+1.4
51,614	-		MPMX19_02814	0.73	+1.5
51,614	-		MPMX19_02814	0.73	-1.2