Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02756

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,899,778	+		MPMX19_02755	0.41	-0.6
2,899,778	+		MPMX19_02755	0.41	+0.4
2,899,778	+		MPMX19_02755	0.41	-0.1
2,899,778	+		MPMX19_02755	0.41	+0.3
2,899,778	+		MPMX19_02755	0.41	+0.8
2,899,778	+		MPMX19_02755	0.41	-0.3
2,899,779	-		MPMX19_02755	0.41	-0.8
2,899,779	-		MPMX19_02755	0.41	-0.9
2,899,779	-		MPMX19_02755	0.41	+0.0
2,899,779	-		MPMX19_02755	0.41	-0.8
2,899,895	+		MPMX19_02755	0.49	-0.1
2,899,895	+		MPMX19_02755	0.49	+0.8
2,899,895	+		MPMX19_02755	0.49	-0.4
2,899,895	+		MPMX19_02755	0.49	+1.4
2,899,895	+		MPMX19_02755	0.49	-0.3
2,899,895	+		MPMX19_02755	0.49	-1.3
2,899,895	+		MPMX19_02755	0.49	+1.4
2,899,895	+		MPMX19_02755	0.49	+0.5
2,899,896	-		MPMX19_02755	0.49	+0.0
2,899,896	-		MPMX19_02755	0.49	-1.2
2,899,896	-		MPMX19_02755	0.49	+0.1
2,899,896	-		MPMX19_02755	0.49	-1.0
2,899,896	-		MPMX19_02755	0.49	+1.0
2,899,896	-		MPMX19_02755	0.49	+0.1
2,899,896	-		MPMX19_02755	0.49	-0.2
2,899,896	-		MPMX19_02755	0.49	-1.0
2,899,896	-		MPMX19_02755	0.49	-1.0
2,899,896	-		MPMX19_02755	0.49	-0.7
2,899,896	-		MPMX19_02755	0.49	-2.0
2,899,896	-		MPMX19_02755	0.49	+0.0
2,900,069	+		MPMX19_02755	0.61	+1.0
2,900,069	+		MPMX19_02755	0.61	-0.8
2,900,069	+		MPMX19_02755	0.61	+0.7
2,900,069	+		MPMX19_02755	0.61	-0.7
2,900,070	-		MPMX19_02755	0.61	+1.6
2,900,070	-		MPMX19_02755	0.61	+1.0
2,900,070	-		MPMX19_02755	0.61	-2.1
2,900,120	+		MPMX19_02755	0.64	-1.5
2,900,120	+		MPMX19_02755	0.64	+0.0
2,900,120	+		MPMX19_02755	0.64	-0.3
2,900,120	+		MPMX19_02755	0.64	+0.4
2,900,120	+		MPMX19_02755	0.64	-0.2
2,900,120	+		MPMX19_02755	0.64	-2.0
2,900,120	+		MPMX19_02755	0.64	-0.6
2,900,120	+		MPMX19_02755	0.64	+1.6
2,900,120	+		MPMX19_02755	0.64	+0.0
2,900,120	+		MPMX19_02755	0.64	-1.0
2,900,120	+		MPMX19_02755	0.64	-2.0
2,900,120	+		MPMX19_02755	0.64	+0.5
2,900,120	+		MPMX19_02755	0.64	+1.3
2,900,120	+		MPMX19_02755	0.64	+0.5
2,900,120	+		MPMX19_02755	0.64	-1.6
2,900,120	+		MPMX19_02755	0.64	+1.0
2,900,120	+		MPMX19_02755	0.64	+0.0
2,900,121	-		MPMX19_02755	0.64	+0.2
2,900,121	-		MPMX19_02755	0.64	-0.5
2,900,121	-		MPMX19_02755	0.64	-0.5
2,900,121	-		MPMX19_02755	0.64	+0.3
2,900,121	-		MPMX19_02755	0.64	+1.0
2,900,121	-		MPMX19_02755	0.64	-0.8
2,900,121	-		MPMX19_02755	0.64	-1.0
2,900,121	-		MPMX19_02755	0.64	-1.2
2,900,121	-		MPMX19_02755	0.64	-1.2
2,900,121	-		MPMX19_02755	0.64	-1.5
2,900,121	-		MPMX19_02755	0.64	-0.8
2,900,121	-		MPMX19_02755	0.64	+0.4
2,900,121	-		MPMX19_02755	0.64	+1.0
2,900,121	-		MPMX19_02755	0.64	-1.0
2,900,121	-		MPMX19_02755	0.64	-1.8
2,900,121	-		MPMX19_02755	0.64	-0.0
2,900,121	-		MPMX19_02755	0.64	-0.3
2,900,121	-		MPMX19_02755	0.64	-2.2
2,900,121	-		MPMX19_02755	0.64	+1.4
2,900,121	-		MPMX19_02755	0.64	-1.1
2,900,121	-		MPMX19_02755	0.64	-0.3
2,900,121	-		MPMX19_02755	0.64	+0.4
2,900,141	+		MPMX19_02755	0.66	+0.3
2,900,141	+		MPMX19_02755	0.66	-1.9
2,900,141	+		MPMX19_02755	0.66	-0.5
2,900,141	+		MPMX19_02755	0.66	-0.1
2,900,141	+		MPMX19_02755	0.66	+1.6
2,900,141	+		MPMX19_02755	0.66	+0.7
2,900,141	+		MPMX19_02755	0.66	-2.9
2,900,141	+		MPMX19_02755	0.66	+0.1
2,900,141	+		MPMX19_02755	0.66	+0.8
2,900,141	+		MPMX19_02755	0.66	-0.3
2,900,141	+		MPMX19_02755	0.66	-0.6
2,900,141	+		MPMX19_02755	0.66	-0.2
2,900,141	+		MPMX19_02755	0.66	-0.5
2,900,141	+		MPMX19_02755	0.66	-0.5
2,900,141	+		MPMX19_02755	0.66	+0.1
2,900,141	+		MPMX19_02755	0.66	+0.2
2,900,141	+		MPMX19_02755	0.66	-0.8
2,900,141	+		MPMX19_02755	0.66	+1.1
2,900,141	+		MPMX19_02755	0.66	-1.0
2,900,141	+		MPMX19_02755	0.66	-0.3
2,900,141	+		MPMX19_02755	0.66	-1.2
2,900,141	+		MPMX19_02755	0.66	-0.1
2,900,141	+		MPMX19_02755	0.66	+0.2
2,900,141	+		MPMX19_02755	0.66	+0.2
2,900,141	+		MPMX19_02755	0.66	+0.0
2,900,141	+		MPMX19_02755	0.66	+1.3
2,900,141	+		MPMX19_02755	0.66	-1.7
2,900,141	+		MPMX19_02755	0.66	+1.1
2,900,142	-		MPMX19_02755	0.66	-0.3
2,900,142	-		MPMX19_02755	0.66	+1.0
2,900,142	-		MPMX19_02755	0.66	-0.1
2,900,142	-		MPMX19_02755	0.66	+0.8
2,900,142	-		MPMX19_02755	0.66	-0.7
2,900,142	-		MPMX19_02755	0.66	-0.1
2,900,142	-		MPMX19_02755	0.66	-0.5
2,900,142	-		MPMX19_02755	0.66	-0.1
2,900,142	-		MPMX19_02755	0.66	-1.0
2,900,142	-		MPMX19_02755	0.66	-1.3
2,900,142	-		MPMX19_02755	0.66	-2.3
2,900,142	-		MPMX19_02755	0.66	+0.7
2,900,142	-		MPMX19_02755	0.66	-1.7
2,900,142	-		MPMX19_02755	0.66	+0.0
2,900,142	-		MPMX19_02755	0.66	-1.1
2,900,142	-		MPMX19_02755	0.66	-0.3
2,900,142	-		MPMX19_02755	0.66	+1.2
2,900,142	-		MPMX19_02755	0.66	-0.1
2,900,142	-		MPMX19_02755	0.66	-0.3
2,900,147	+		MPMX19_02755	0.66	-1.6
2,900,147	+		MPMX19_02755	0.66	+0.8
2,900,148	-		MPMX19_02755	0.66	+0.1
2,900,148	-		MPMX19_02755	0.66	-1.3
2,900,234	+		MPMX19_02755	0.72	+0.6
2,900,235	-		MPMX19_02755	0.72	+0.7
2,900,235	-		MPMX19_02755	0.72	+0.0
2,900,351	+		MPMX19_02755	0.80	+3.0
2,900,351	+		MPMX19_02755	0.80	+0.1
2,900,351	+		MPMX19_02755	0.80	+0.3
2,900,351	+		MPMX19_02755	0.80	+0.4
2,900,351	+		MPMX19_02755	0.80	+0.8
2,900,351	+		MPMX19_02755	0.80	-1.0
2,900,351	+		MPMX19_02755	0.80	-0.6
2,900,352	-		MPMX19_02755	0.80	-0.6
2,900,352	-		MPMX19_02755	0.80	-0.9
2,900,352	-		MPMX19_02755	0.80	-0.8
2,900,352	-		MPMX19_02755	0.80	-0.5
2,900,352	-		MPMX19_02755	0.80	+0.1
2,900,352	-		MPMX19_02755	0.80	+0.7
2,900,352	-		MPMX19_02755	0.80	-0.2
2,900,352	-		MPMX19_02755	0.80	-2.1
2,900,352	-		MPMX19_02755	0.80	+0.0
2,900,352	-		MPMX19_02755	0.80	+1.3
2,900,399	+		MPMX19_02755	0.83	-0.8
2,900,399	+		MPMX19_02755	0.83	+0.5
2,900,399	+		MPMX19_02755	0.83	+0.0
2,900,399	+		MPMX19_02755	0.83	-0.6
2,900,399	+		MPMX19_02755	0.83	+1.1
2,900,399	+		MPMX19_02755	0.83	+0.4
2,900,400	-		MPMX19_02755	0.83	-0.7
2,900,400	-		MPMX19_02755	0.83	-1.3
2,900,400	-		MPMX19_02755	0.83	-0.7
2,900,400	-		MPMX19_02755	0.83	-0.8
2,900,400	-		MPMX19_02755	0.83	-2.0
2,900,400	-		MPMX19_02755	0.83	-0.3
2,900,415	-		MPMX19_02755	0.84	+0.4
2,900,415	-		MPMX19_02755	0.84	+0.8
2,900,417	+		MPMX19_02755	0.84	-0.9
2,900,417	+		MPMX19_02755	0.84	-0.0
2,900,417	+		MPMX19_02755	0.84	-0.6
2,900,417	+		MPMX19_02755	0.84	+1.6
2,900,417	+		MPMX19_02755	0.84	-0.3
2,900,417	+		MPMX19_02755	0.84	+0.3
2,900,417	+		MPMX19_02755	0.84	+0.1
2,900,417	+		MPMX19_02755	0.84	-0.7
2,900,417	+		MPMX19_02755	0.84	-2.1
2,900,417	+		MPMX19_02755	0.84	-1.5
2,900,417	+		MPMX19_02755	0.84	-0.2
2,900,417	+		MPMX19_02755	0.84	-0.6
2,900,417	+		MPMX19_02755	0.84	+0.8
2,900,417	+		MPMX19_02755	0.84	-0.7
2,900,418	-		MPMX19_02755	0.84	-1.0
2,900,418	-		MPMX19_02755	0.84	+0.5
2,900,418	-		MPMX19_02755	0.84	+0.3
2,900,418	-		MPMX19_02755	0.84	+1.2
2,900,418	-		MPMX19_02755	0.84	+0.3
2,900,418	-		MPMX19_02755	0.84	+0.5
2,900,418	-		MPMX19_02755	0.84	-2.1
2,900,418	-		MPMX19_02755	0.84	+0.3
2,900,418	-		MPMX19_02755	0.84	-2.9
2,900,426	+		MPMX19_02755	0.85	+1.4
2,900,426	+		MPMX19_02755	0.85	-0.4
2,900,426	+		MPMX19_02755	0.85	-0.7
2,900,427	-		MPMX19_02755	0.85	-1.2
2,900,427	-		MPMX19_02755	0.85	-0.2
2,900,501	+		MPMX19_02755	0.90	+0.3
2,900,501	+		MPMX19_02755	0.90	-0.7
2,900,502	-		MPMX19_02755	0.90	+1.2
2,900,502	-		MPMX19_02755	0.90	+0.4
2,900,651	+				-1.9
2,900,652	-				+0.7
2,900,652	-				+3.6
2,900,652	-				+0.3
2,900,652	-				-1.7
2,900,665	+				-1.5
2,900,665	+				-0.4
2,900,665	+				-0.5
2,900,665	+				+0.0
2,900,665	+				+0.4
2,900,665	+				+0.8
2,900,665	+				-1.6
2,900,665	+				-1.0
2,900,665	+				-0.6
2,900,666	-				+0.2
2,900,666	-				-2.5
2,900,666	-				+0.5
2,900,666	-				-1.4
2,900,666	-				+1.0
2,900,666	-				-0.6
2,900,666	-				+0.4
2,900,675	+				-0.8
2,900,675	+				-1.2
2,900,675	+				-0.2
2,900,675	+				-0.3
2,900,675	+				-1.3
2,900,675	+				+0.8
2,900,675	+				-1.7
2,900,676	-				-1.3
2,900,676	-				+0.1
2,900,676	-				-1.3
2,900,676	-				+0.4
2,900,676	-				-0.7
2,900,676	-				+1.0
2,900,676	-				-0.7
2,900,676	-				-2.1
2,900,676	-				-1.2
2,900,681	+				+0.6
2,900,681	+				-0.5
2,900,682	-				-0.2
2,900,682	-				+1.0
2,900,682	-				+0.1
2,900,682	-				-0.6
2,900,936	+		MPMX19_02756	0.26	+1.6
2,900,936	+		MPMX19_02756	0.26	+0.0
2,900,936	+		MPMX19_02756	0.26	-1.5
2,900,936	+		MPMX19_02756	0.26	-1.2
2,900,936	+		MPMX19_02756	0.26	-0.7
2,900,936	+		MPMX19_02756	0.26	-0.1
2,900,936	+		MPMX19_02756	0.26	+0.0
2,900,936	+		MPMX19_02756	0.26	-0.7
2,900,936	+		MPMX19_02756	0.26	+1.4
2,900,936	+		MPMX19_02756	0.26	-0.2
2,900,936	+		MPMX19_02756	0.26	+0.0
2,900,936	+		MPMX19_02756	0.26	-1.5
2,900,937	-		MPMX19_02756	0.26	-0.3
2,900,937	-		MPMX19_02756	0.26	+0.6
2,900,937	-		MPMX19_02756	0.26	+0.1
2,900,937	-		MPMX19_02756	0.26	+0.4
2,900,937	-		MPMX19_02756	0.26	-0.2
2,900,937	-		MPMX19_02756	0.26	+0.0
2,900,937	-		MPMX19_02756	0.26	+0.6
2,900,937	-		MPMX19_02756	0.26	-0.8
2,900,937	-		MPMX19_02756	0.26	-1.7
2,900,937	-		MPMX19_02756	0.26	+0.0
2,900,937	-		MPMX19_02756	0.26	-0.1
2,900,937	-		MPMX19_02756	0.26	-1.8
2,900,937	-		MPMX19_02756	0.26	-0.2
2,900,937	-		MPMX19_02756	0.26	+0.6
2,900,937	-		MPMX19_02756	0.26	-1.6
2,900,937	-		MPMX19_02756	0.26	-0.2
2,900,937	-		MPMX19_02756	0.26	+0.0
2,901,325	+		MPMX19_02756	0.67	-0.3
2,901,325	+		MPMX19_02756	0.67	+0.4
2,901,326	-		MPMX19_02756	0.67	+0.2
2,901,326	-		MPMX19_02756	0.67	-1.3
2,901,500	+		MPMX19_02756	0.85	-0.2
2,901,501	-		MPMX19_02756	0.85	-0.5
2,901,501	-		MPMX19_02756	0.85	+1.7
2,901,501	-		MPMX19_02756	0.85	+0.6
2,901,501	-		MPMX19_02756	0.85	-0.2
2,901,501	-		MPMX19_02756	0.85	+0.6
2,901,730	+		MPMX19_02757	0.11	-0.6
2,901,731	-		MPMX19_02757	0.11	+0.3
2,902,264	+		MPMX19_02757	0.76	+0.1
2,902,264	+		MPMX19_02757	0.76	-0.1
2,902,264	+		MPMX19_02757	0.76	-1.6
2,902,264	+		MPMX19_02757	0.76	+0.1
2,902,264	+		MPMX19_02757	0.76	-2.0
2,902,264	+		MPMX19_02757	0.76	-1.0
2,902,264	+		MPMX19_02757	0.76	-0.3
2,902,264	+		MPMX19_02757	0.76	-0.6
2,902,265	-		MPMX19_02757	0.76	-0.3
2,902,265	-		MPMX19_02757	0.76	+0.4
2,902,265	-		MPMX19_02757	0.76	-1.3
2,902,265	-		MPMX19_02757	0.76	-1.8
2,902,551	-				+0.0