Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02735

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,878,404	+		MPMX19_02733	0.75	+0.7
2,878,404	+		MPMX19_02733	0.75	+0.8
2,878,405	-		MPMX19_02733	0.75	+2.0
2,878,405	-		MPMX19_02733	0.75	-0.3
2,878,405	-		MPMX19_02733	0.75	+1.0
2,878,531	+		MPMX19_02733	0.84	-0.3
2,878,532	-		MPMX19_02733	0.84	-1.3
2,878,532	-		MPMX19_02733	0.84	-0.2
2,878,532	-		MPMX19_02733	0.84	-0.9
2,878,713	+				+0.1
2,878,713	+				+0.4
2,878,714	-				-1.2
2,878,714	-				+0.3
2,878,714	-				+0.5
2,878,752	+				+0.2
2,878,752	+				+0.2
2,878,752	+				+1.0
2,878,752	+				+0.3
2,878,752	+				-1.2
2,878,753	-				+0.6
2,878,753	-				+0.2
2,878,799	-				-0.3
2,878,799	-				-0.3
2,878,807	-				+1.0
2,878,860	+				-0.4
2,878,860	+				-2.3
2,878,860	+				-0.4
2,878,860	+				-0.3
2,878,861	-				-0.5
2,878,861	-				+0.8
2,878,861	-				+0.4
2,878,892	+				+0.5
2,878,919	+				-1.2
2,878,920	-				+1.7
2,878,925	+				+0.1
2,878,925	+				-0.1
2,878,925	+				-1.8
2,878,926	-				+0.7
2,878,926	-				-1.4
2,879,077	+				-1.2
2,879,077	+				-1.3
2,879,077	+				-0.4
2,879,077	+				-0.2
2,879,077	+				-1.3
2,879,077	+				-0.6
2,879,077	+				-1.1
2,879,077	+				-0.2
2,879,077	+				-0.8
2,879,077	+				+0.5
2,879,077	+				+0.4
2,879,077	+				-1.6
2,879,077	+				+0.7
2,879,077	+				+0.3
2,879,077	+				-1.3
2,879,077	+				-0.3
2,879,077	+				-1.0
2,879,077	+				-1.9
2,879,077	+				-0.2
2,879,078	-				+0.4
2,879,078	-				-0.6
2,879,078	-				+0.4
2,879,078	-				+1.0
2,879,078	-				+0.1
2,879,078	-				+0.0
2,879,078	-				-0.6
2,879,078	-				+0.4
2,879,078	-				+0.7
2,879,078	-				+0.1
2,879,078	-				+0.8
2,879,078	-				-0.3
2,879,078	-				+0.1
2,879,078	-				+0.5
2,879,078	-				-0.3
2,879,079	+				-0.8
2,879,079	+				+0.7
2,879,079	+				-1.7
2,879,079	+				+1.0
2,879,079	+				-0.9
2,879,079	+				-1.0
2,879,079	+				+0.0
2,879,079	+				-0.2
2,879,079	+				+0.0
2,879,079	+				-1.5
2,879,079	+				+1.3
2,879,079	+				-0.2
2,879,079	+				-0.1
2,879,079	+				+1.2
2,879,079	+				-0.3
2,879,080	-				-0.6
2,879,080	-				-0.3
2,879,080	-				+1.3
2,879,080	-				-1.5
2,879,080	-				+0.9
2,879,080	-				+0.5
2,879,080	-				-0.3
2,879,080	-				+0.2
2,879,080	-				+0.2
2,879,080	-				-2.2
2,879,080	-				+0.7
2,879,080	-				+0.9
2,879,104	+				+0.3
2,879,105	-				+1.6
2,879,109	+				+0.2
2,879,109	+				-0.5
2,879,109	+				+0.8
2,879,109	+				-0.3
2,879,109	+				-0.2
2,879,109	+				-0.2
2,879,110	-				+0.1
2,879,110	-				+1.1
2,879,110	-				+0.0
2,879,110	-				+0.0
2,879,110	-				+2.5
2,879,110	-				+0.4
2,879,328	+				-1.6
2,879,328	+				-0.2
2,879,328	+				-0.8
2,879,328	+				-0.5
2,879,328	+				-0.2
2,879,328	+				+0.2
2,879,329	-				+0.4
2,879,329	-				+0.5
2,879,329	-				+1.0
2,879,359	-				-2.5
2,880,030	+		MPMX19_02735	0.79	+2.4
2,880,031	-		MPMX19_02735	0.79	-0.2
2,880,031	-		MPMX19_02735	0.79	-0.1
2,880,253	+				+1.2
2,880,253	+				+0.5
2,880,253	+				+0.2
2,880,253	+				-0.8
2,880,253	+				-0.6
2,880,253	+				+0.5
2,880,253	+				-0.5
2,880,253	+				-0.2
2,880,253	+				-0.6
2,880,253	+				-1.6
2,880,253	+				+1.7
2,880,253	+				-1.2
2,880,253	+				+0.3
2,880,253	+				-0.8
2,880,253	+				-0.4
2,880,253	+				+1.2
2,880,253	+				+0.2
2,880,253	+				-0.4
2,880,253	+				-0.5
2,880,253	+				+0.6
2,880,253	+				+0.2
2,880,253	+				+0.2
2,880,253	+				-0.5
2,880,253	+				-0.8
2,880,254	-				-0.2
2,880,254	-				+1.4
2,880,254	-				-0.8
2,880,254	-				-1.8
2,880,254	-				-0.1
2,880,254	-				+0.2
2,880,254	-				+0.6
2,880,254	-				+0.3
2,880,254	-				+0.5
2,880,254	-				-1.7
2,880,254	-				-0.1
2,880,254	-				+0.9
2,880,254	-				-0.1
2,880,254	-				+1.3
2,880,254	-				+0.5
2,880,254	-				-0.3
2,880,254	-				+1.3
2,880,254	-				+1.0
2,880,254	-				-1.5
2,880,254	-				-0.0
2,880,254	-				+0.0
2,880,254	-				-1.0
2,880,254	-				-0.7
2,880,254	-				+0.1
2,880,254	-				-2.1
2,880,254	-				-1.2
2,880,254	-				+0.2
2,880,254	-				-0.7
2,880,255	+				-1.0
2,880,255	+				-0.8
2,880,255	+				-1.3
2,880,255	+				+0.9
2,880,255	+				+1.6
2,880,255	+				+0.5
2,880,255	+				+0.0
2,880,256	-				-1.5
2,880,256	-				+0.5
2,880,256	-				-1.0
2,880,256	-				+0.0
2,880,256	-				-0.6
2,880,293	+				-0.9
2,880,293	+				-1.2
2,880,293	+				+0.8
2,880,293	+				-0.1
2,880,293	+				-0.2
2,880,293	+				-0.8
2,880,293	+				-1.2
2,880,293	+				+0.6
2,880,293	+				+0.7
2,880,293	+				+0.7
2,880,293	+				+0.1
2,880,293	+				+1.0
2,880,293	+				-0.8
2,880,293	+				-1.3
2,880,293	+				+0.8
2,880,293	+				+1.3
2,880,293	+				-0.7
2,880,293	+				+0.0
2,880,293	+				+0.0
2,880,293	+				+1.3
2,880,293	+				+1.3
2,880,294	-				-0.9
2,880,294	-				-0.2
2,880,294	-				-0.1
2,880,294	-				-1.2
2,880,294	-				+0.3
2,880,294	-				+0.4
2,880,294	-				-1.3
2,880,294	-				-0.7
2,880,294	-				+0.4
2,880,294	-				-1.3
2,880,294	-				-2.3
2,880,294	-				+0.2
2,880,294	-				-0.3
2,880,294	-				+1.3
2,880,294	-				-1.2
2,880,294	-				-1.6
2,880,294	-				+0.8
2,880,294	-				-0.3
2,880,294	-				-0.2
2,880,294	-				+0.7
2,880,294	-				-0.6
2,880,308	+				-0.8
2,880,308	+				+1.0
2,880,308	+				-0.7
2,880,308	+				-1.0
2,880,308	+				+0.2
2,880,308	+				+0.4
2,880,308	+				+1.8
2,880,308	+				-0.3
2,880,308	+				+0.5
2,880,309	-				+1.5
2,880,309	-				+0.0
2,880,309	-				-0.9
2,880,309	-				-1.2
2,880,309	-				-1.8
2,880,309	-				-0.9
2,880,359	-				-1.0
2,880,463	+				-1.2
2,880,463	+				-0.1
2,880,463	+				-0.2
2,880,463	+				+0.8
2,880,464	-				-1.1
2,880,464	-				+0.3
2,880,464	-				-0.8
2,880,464	-				-1.4
2,880,622	+		MPMX19_02736	0.15	-0.6
2,880,622	+		MPMX19_02736	0.15	-0.3
2,880,622	+		MPMX19_02736	0.15	+0.3
2,880,622	+		MPMX19_02736	0.15	-0.6
2,880,622	+		MPMX19_02736	0.15	-0.1
2,880,622	+		MPMX19_02736	0.15	-1.5
2,880,623	-		MPMX19_02736	0.15	-1.5
2,880,623	-		MPMX19_02736	0.15	-0.8
2,880,623	-		MPMX19_02736	0.15	-0.7
2,880,646	+		MPMX19_02736	0.17	-1.7
2,880,646	+		MPMX19_02736	0.17	-0.1
2,880,646	+		MPMX19_02736	0.17	-0.5
2,880,646	+		MPMX19_02736	0.17	-0.7
2,880,650	-		MPMX19_02736	0.17	+0.5
2,880,691	+		MPMX19_02736	0.20	-0.3
2,880,691	+		MPMX19_02736	0.20	-1.0
2,880,691	+		MPMX19_02736	0.20	-1.9
2,880,691	+		MPMX19_02736	0.20	-1.5
2,880,692	-		MPMX19_02736	0.20	-0.7
2,880,692	-		MPMX19_02736	0.20	-0.6
2,880,692	-		MPMX19_02736	0.20	+0.4
2,880,692	-		MPMX19_02736	0.20	-1.1
2,880,847	+		MPMX19_02736	0.33	-0.3
2,880,848	-		MPMX19_02736	0.33	-1.5
2,880,848	-		MPMX19_02736	0.33	-2.0
2,880,868	+		MPMX19_02736	0.35	+0.4
2,880,868	+		MPMX19_02736	0.35	+0.9
2,880,868	+		MPMX19_02736	0.35	-1.8
2,880,868	+		MPMX19_02736	0.35	+0.4
2,880,868	+		MPMX19_02736	0.35	-0.5
2,880,868	+		MPMX19_02736	0.35	-0.9
2,880,868	+		MPMX19_02736	0.35	-1.7
2,880,868	+		MPMX19_02736	0.35	-1.8
2,880,868	+		MPMX19_02736	0.35	-1.0
2,880,868	+		MPMX19_02736	0.35	-0.6
2,880,868	+		MPMX19_02736	0.35	-1.0
2,880,868	+		MPMX19_02736	0.35	-2.2
2,880,868	+		MPMX19_02736	0.35	-1.9
2,880,868	+		MPMX19_02736	0.35	-1.5
2,880,868	+		MPMX19_02736	0.35	-0.3
2,880,868	+		MPMX19_02736	0.35	-1.6
2,880,868	+		MPMX19_02736	0.35	+0.2
2,880,868	+		MPMX19_02736	0.35	-1.0
2,880,868	+		MPMX19_02736	0.35	-1.2
2,880,868	+		MPMX19_02736	0.35	-0.5
2,880,868	+		MPMX19_02736	0.35	-1.6
2,880,868	+		MPMX19_02736	0.35	-1.9
2,880,869	-		MPMX19_02736	0.35	-0.2
2,880,869	-		MPMX19_02736	0.35	-2.5
2,880,869	-		MPMX19_02736	0.35	-0.9
2,880,869	-		MPMX19_02736	0.35	-0.7
2,880,869	-		MPMX19_02736	0.35	-1.3
2,880,869	-		MPMX19_02736	0.35	-0.3
2,880,869	-		MPMX19_02736	0.35	-1.1
2,880,869	-		MPMX19_02736	0.35	-0.2
2,880,869	-		MPMX19_02736	0.35	+0.1
2,880,869	-		MPMX19_02736	0.35	+0.5
2,880,869	-		MPMX19_02736	0.35	+1.0
2,881,027	+		MPMX19_02736	0.48	-1.2
2,881,027	+		MPMX19_02736	0.48	+0.4
2,881,027	+		MPMX19_02736	0.48	+0.0
2,881,027	+		MPMX19_02736	0.48	-0.2
2,881,027	+		MPMX19_02736	0.48	+0.8
2,881,027	+		MPMX19_02736	0.48	-0.4
2,881,027	+		MPMX19_02736	0.48	+0.0
2,881,027	+		MPMX19_02736	0.48	+0.3
2,881,027	+		MPMX19_02736	0.48	-0.7
2,881,027	+		MPMX19_02736	0.48	-0.4
2,881,027	+		MPMX19_02736	0.48	+1.2
2,881,027	+		MPMX19_02736	0.48	-0.8
2,881,028	-		MPMX19_02736	0.48	-0.2
2,881,028	-		MPMX19_02736	0.48	-1.0
2,881,028	-		MPMX19_02736	0.48	-1.0
2,881,028	-		MPMX19_02736	0.48	-1.5
2,881,028	-		MPMX19_02736	0.48	-1.5