Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02595

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,712,315	+		MPMX19_02594	0.15	-2.8
2,712,315	+		MPMX19_02594	0.15	-1.0
2,712,315	+		MPMX19_02594	0.15	-0.6
2,712,315	+		MPMX19_02594	0.15	+0.4
2,712,315	+		MPMX19_02594	0.15	-0.2
2,712,315	+		MPMX19_02594	0.15	+0.8
2,712,315	+		MPMX19_02594	0.15	+0.5
2,712,315	+		MPMX19_02594	0.15	+0.3
2,712,315	+		MPMX19_02594	0.15	-0.2
2,712,315	+		MPMX19_02594	0.15	+1.5
2,712,315	+		MPMX19_02594	0.15	-0.1
2,712,315	+		MPMX19_02594	0.15	-1.0
2,712,315	+		MPMX19_02594	0.15	+0.1
2,712,315	+		MPMX19_02594	0.15	-1.5
2,712,315	+		MPMX19_02594	0.15	-0.0
2,712,315	+		MPMX19_02594	0.15	+0.4
2,712,315	+		MPMX19_02594	0.15	-0.3
2,712,315	+		MPMX19_02594	0.15	-1.5
2,712,315	+		MPMX19_02594	0.15	+0.8
2,712,315	+		MPMX19_02594	0.15	-1.2
2,712,315	+		MPMX19_02594	0.15	-2.0
2,712,315	+		MPMX19_02594	0.15	-0.2
2,712,315	+		MPMX19_02594	0.15	+0.5
2,712,315	+		MPMX19_02594	0.15	+0.3
2,712,315	+		MPMX19_02594	0.15	+0.1
2,712,315	+		MPMX19_02594	0.15	-1.9
2,712,315	+		MPMX19_02594	0.15	-1.0
2,712,315	+		MPMX19_02594	0.15	-2.2
2,712,315	+		MPMX19_02594	0.15	+0.4
2,712,315	+		MPMX19_02594	0.15	+0.2
2,712,315	+		MPMX19_02594	0.15	-1.7
2,712,315	+		MPMX19_02594	0.15	+0.1
2,712,316	-		MPMX19_02594	0.15	-0.5
2,712,316	-		MPMX19_02594	0.15	+0.0
2,712,316	-		MPMX19_02594	0.15	-0.6
2,712,316	-		MPMX19_02594	0.15	-1.2
2,712,316	-		MPMX19_02594	0.15	-1.3
2,712,316	-		MPMX19_02594	0.15	-0.2
2,712,316	-		MPMX19_02594	0.15	+0.4
2,712,316	-		MPMX19_02594	0.15	+1.2
2,712,316	-		MPMX19_02594	0.15	+0.1
2,712,316	-		MPMX19_02594	0.15	-1.6
2,712,316	-		MPMX19_02594	0.15	-0.7
2,712,316	-		MPMX19_02594	0.15	+0.5
2,712,316	-		MPMX19_02594	0.15	-0.3
2,712,316	-		MPMX19_02594	0.15	-0.2
2,712,316	-		MPMX19_02594	0.15	-0.6
2,712,316	-		MPMX19_02594	0.15	-0.6
2,712,316	-		MPMX19_02594	0.15	+1.6
2,712,316	-		MPMX19_02594	0.15	-1.0
2,712,316	-		MPMX19_02594	0.15	+0.2
2,712,316	-		MPMX19_02594	0.15	-1.4
2,712,316	-		MPMX19_02594	0.15	-0.6
2,712,316	-		MPMX19_02594	0.15	-0.3
2,712,316	-		MPMX19_02594	0.15	+0.7
2,712,316	-		MPMX19_02594	0.15	-0.5
2,712,316	-		MPMX19_02594	0.15	-1.0
2,712,316	-		MPMX19_02594	0.15	-0.8
2,712,316	-		MPMX19_02594	0.15	-0.8
2,712,316	-		MPMX19_02594	0.15	-1.2
2,712,316	-		MPMX19_02594	0.15	-1.0
2,712,316	-		MPMX19_02594	0.15	-0.6
2,712,316	-		MPMX19_02594	0.15	-1.9
2,712,342	+		MPMX19_02594	0.17	-1.0
2,712,342	+		MPMX19_02594	0.17	+1.2
2,712,342	+		MPMX19_02594	0.17	-0.3
2,712,342	+		MPMX19_02594	0.17	-0.4
2,712,342	+		MPMX19_02594	0.17	-0.5
2,712,342	+		MPMX19_02594	0.17	-1.2
2,712,342	+		MPMX19_02594	0.17	-1.1
2,712,342	+		MPMX19_02594	0.17	-1.3
2,712,342	+		MPMX19_02594	0.17	-0.2
2,712,342	+		MPMX19_02594	0.17	-0.6
2,712,342	+		MPMX19_02594	0.17	-0.2
2,712,342	+		MPMX19_02594	0.17	-1.0
2,712,342	+		MPMX19_02594	0.17	-1.3
2,712,342	+		MPMX19_02594	0.17	-2.0
2,712,342	+		MPMX19_02594	0.17	+0.7
2,712,342	+		MPMX19_02594	0.17	-1.2
2,712,342	+		MPMX19_02594	0.17	+0.9
2,712,342	+		MPMX19_02594	0.17	-1.6
2,712,342	+		MPMX19_02594	0.17	-1.1
2,712,342	+		MPMX19_02594	0.17	-1.6
2,712,342	+		MPMX19_02594	0.17	-0.4
2,712,342	+		MPMX19_02594	0.17	-0.1
2,712,342	+		MPMX19_02594	0.17	-0.3
2,712,342	+		MPMX19_02594	0.17	-1.1
2,712,343	-		MPMX19_02594	0.17	-1.2
2,712,343	-		MPMX19_02594	0.17	-1.9
2,712,343	-		MPMX19_02594	0.17	-1.2
2,712,343	-		MPMX19_02594	0.17	+0.3
2,712,343	-		MPMX19_02594	0.17	-1.1
2,712,343	-		MPMX19_02594	0.17	+1.1
2,712,343	-		MPMX19_02594	0.17	+1.2
2,712,343	-		MPMX19_02594	0.17	-0.1
2,712,343	-		MPMX19_02594	0.17	-0.6
2,712,343	-		MPMX19_02594	0.17	-1.3
2,712,343	-		MPMX19_02594	0.17	+0.2
2,712,343	-		MPMX19_02594	0.17	+0.4
2,712,343	-		MPMX19_02594	0.17	+0.4
2,712,343	-		MPMX19_02594	0.17	-2.2
2,712,343	-		MPMX19_02594	0.17	-1.6
2,712,343	-		MPMX19_02594	0.17	+1.1
2,712,343	-		MPMX19_02594	0.17	+2.0
2,712,343	-		MPMX19_02594	0.17	-0.6
2,712,343	-		MPMX19_02594	0.17	-1.2
2,712,343	-		MPMX19_02594	0.17	-0.4
2,712,343	-		MPMX19_02594	0.17	+0.1
2,712,534	+		MPMX19_02594	0.36	-1.9
2,712,534	+		MPMX19_02594	0.36	-0.2
2,712,534	+		MPMX19_02594	0.36	-1.3
2,712,534	+		MPMX19_02594	0.36	-0.8
2,712,534	+		MPMX19_02594	0.36	+0.3
2,712,534	+		MPMX19_02594	0.36	-0.1
2,712,534	+		MPMX19_02594	0.36	+1.3
2,712,534	+		MPMX19_02594	0.36	-0.6
2,712,534	+		MPMX19_02594	0.36	-0.3
2,712,535	-		MPMX19_02594	0.36	-0.8
2,712,535	-		MPMX19_02594	0.36	-1.5
2,712,535	-		MPMX19_02594	0.36	+0.8
2,712,535	-		MPMX19_02594	0.36	-0.4
2,712,535	-		MPMX19_02594	0.36	+0.1
2,712,546	+		MPMX19_02594	0.37	-0.3
2,712,546	+		MPMX19_02594	0.37	-1.3
2,712,547	-		MPMX19_02594	0.37	-0.6
2,712,547	-		MPMX19_02594	0.37	+0.0
2,712,547	-		MPMX19_02594	0.37	+1.2
2,712,597	+		MPMX19_02594	0.41	-0.5
2,712,597	+		MPMX19_02594	0.41	+0.3
2,712,598	-		MPMX19_02594	0.42	+0.5
2,712,598	-		MPMX19_02594	0.42	-0.8
2,712,598	-		MPMX19_02594	0.42	+0.1
2,712,598	-		MPMX19_02594	0.42	-1.2
2,712,598	-		MPMX19_02594	0.42	+0.2
2,712,726	+		MPMX19_02594	0.54	-2.0
2,712,727	-		MPMX19_02594	0.54	+1.2
2,712,727	-		MPMX19_02594	0.54	-1.2
2,712,795	+		MPMX19_02594	0.60	-0.6
2,712,795	+		MPMX19_02594	0.60	-0.2
2,712,795	+		MPMX19_02594	0.60	-0.5
2,712,795	+		MPMX19_02594	0.60	-0.3
2,712,795	+		MPMX19_02594	0.60	-1.6
2,712,795	+		MPMX19_02594	0.60	+0.5
2,712,795	+		MPMX19_02594	0.60	+1.3
2,712,795	+		MPMX19_02594	0.60	+0.6
2,712,796	-		MPMX19_02594	0.60	+1.0
2,712,796	-		MPMX19_02594	0.60	+1.4
2,712,796	-		MPMX19_02594	0.60	-0.8
2,712,796	-		MPMX19_02594	0.60	+0.6
2,712,796	-		MPMX19_02594	0.60	-0.2
2,712,796	-		MPMX19_02594	0.60	+1.7
2,712,796	-		MPMX19_02594	0.60	-2.6
2,712,796	-		MPMX19_02594	0.60	-1.3
2,712,796	-		MPMX19_02594	0.60	+0.9
2,712,796	-		MPMX19_02594	0.60	+0.5
2,712,871	-		MPMX19_02594	0.67	+0.5
2,712,906	+		MPMX19_02594	0.71	-0.2
2,712,906	+		MPMX19_02594	0.71	-0.8
2,712,906	+		MPMX19_02594	0.71	-2.3
2,712,906	+		MPMX19_02594	0.71	-1.1
2,712,906	+		MPMX19_02594	0.71	-0.7
2,712,906	+		MPMX19_02594	0.71	-0.2
2,712,906	+		MPMX19_02594	0.71	-2.1
2,712,906	+		MPMX19_02594	0.71	-0.4
2,712,906	+		MPMX19_02594	0.71	-0.8
2,712,906	+		MPMX19_02594	0.71	+0.4
2,712,906	+		MPMX19_02594	0.71	-0.8
2,712,906	+		MPMX19_02594	0.71	-2.9
2,712,907	-		MPMX19_02594	0.71	-0.9
2,712,907	-		MPMX19_02594	0.71	-0.1
2,712,907	-		MPMX19_02594	0.71	+0.1
2,712,907	-		MPMX19_02594	0.71	-0.3
2,712,907	-		MPMX19_02594	0.71	-0.6
2,712,966	+		MPMX19_02594	0.76	+1.0
2,712,966	+		MPMX19_02594	0.76	-0.4
2,712,966	+		MPMX19_02594	0.76	-1.0
2,712,966	+		MPMX19_02594	0.76	+0.3
2,712,966	+		MPMX19_02594	0.76	+1.7
2,712,967	-		MPMX19_02594	0.77	-0.8
2,712,967	-		MPMX19_02594	0.77	-0.7
2,712,967	-		MPMX19_02594	0.77	+0.9
2,712,967	-		MPMX19_02594	0.77	-1.5
2,713,002	+		MPMX19_02594	0.80	-1.1
2,713,002	+		MPMX19_02594	0.80	-1.0
2,713,002	+		MPMX19_02594	0.80	-0.7
2,713,002	+		MPMX19_02594	0.80	-1.0
2,713,002	+		MPMX19_02594	0.80	+0.2
2,713,002	+		MPMX19_02594	0.80	-0.5
2,713,002	+		MPMX19_02594	0.80	+1.2
2,713,002	+		MPMX19_02594	0.80	+0.0
2,713,002	+		MPMX19_02594	0.80	-1.0
2,713,002	+		MPMX19_02594	0.80	-0.1
2,713,002	+		MPMX19_02594	0.80	-0.7
2,713,002	+		MPMX19_02594	0.80	+0.1
2,713,003	-		MPMX19_02594	0.80	-0.4
2,713,003	-		MPMX19_02594	0.80	+0.1
2,713,003	-		MPMX19_02594	0.80	+0.4
2,713,003	-		MPMX19_02594	0.80	-0.3
2,713,003	-		MPMX19_02594	0.80	+0.7
2,713,003	-		MPMX19_02594	0.80	-1.4
2,713,212	+				-1.0
2,713,212	+				-0.3
2,713,212	+				+0.2
2,713,213	-				-0.8
2,713,213	-				-1.1
2,713,213	-				-1.7
2,713,213	-				-0.8
2,713,213	-				+0.1
2,713,238	+				-1.8
2,713,276	+				+0.2
2,713,276	+				-1.1
2,713,276	+				-1.0
2,713,276	+				+1.1
2,713,276	+				-0.3
2,713,276	+				-1.0
2,713,276	+				+2.0
2,713,277	-				-1.1
2,713,277	-				+0.6
2,713,277	-				+1.7
2,713,277	-				+0.0
2,713,277	-				-0.8
2,713,398	+		MPMX19_02595	0.19	-0.7
2,713,398	+		MPMX19_02595	0.19	+1.1
2,713,398	+		MPMX19_02595	0.19	-0.3
2,713,398	+		MPMX19_02595	0.19	+0.8
2,713,398	+		MPMX19_02595	0.19	+0.8
2,713,398	+		MPMX19_02595	0.19	-1.7
2,713,398	+		MPMX19_02595	0.19	-1.3
2,713,398	+		MPMX19_02595	0.19	-0.3
2,713,398	+		MPMX19_02595	0.19	+0.2
2,713,398	+		MPMX19_02595	0.19	-0.5
2,713,398	+		MPMX19_02595	0.19	-0.4
2,713,398	+		MPMX19_02595	0.19	-3.0
2,713,398	+		MPMX19_02595	0.19	+0.4
2,713,398	+		MPMX19_02595	0.19	+0.1
2,713,398	+		MPMX19_02595	0.19	+0.2
2,713,399	-		MPMX19_02595	0.19	-0.3
2,713,399	-		MPMX19_02595	0.19	-0.1
2,713,399	-		MPMX19_02595	0.19	-0.5
2,713,399	-		MPMX19_02595	0.19	+1.3
2,713,399	-		MPMX19_02595	0.19	-0.3
2,713,399	-		MPMX19_02595	0.19	+0.8
2,713,399	-		MPMX19_02595	0.19	+0.4
2,713,399	-		MPMX19_02595	0.19	-2.3
2,713,399	-		MPMX19_02595	0.19	-2.5
2,713,399	-		MPMX19_02595	0.19	+0.1
2,713,399	-		MPMX19_02595	0.19	+0.3
2,713,748	+		MPMX19_02595	0.82	+0.1
2,713,748	+		MPMX19_02595	0.82	-0.5
2,713,748	+		MPMX19_02595	0.82	-0.2
2,713,749	-		MPMX19_02595	0.82	-1.7
2,713,749	-		MPMX19_02595	0.82	+0.4
2,713,765	+		MPMX19_02595	0.85	+0.0
2,713,765	+		MPMX19_02595	0.85	-1.3
2,713,766	-		MPMX19_02595	0.86	-2.4
2,713,766	-		MPMX19_02595	0.86	-1.1
2,713,798	+				-0.9
2,713,798	+				+1.0
2,713,798	+				-1.0
2,713,799	-				-0.2
2,713,799	-				-1.3
2,713,799	-				-2.1
2,713,799	-				-0.6
2,713,799	-				+2.0
2,713,799	-				-1.6
2,713,799	-				+0.0
2,713,799	-				-0.8
2,713,799	-				+0.5
2,713,799	-				-1.3
2,713,799	-				+0.3
2,713,816	+				-1.3
2,713,816	+				-0.7
2,713,816	+				-2.2
2,713,952	+				+0.2
2,713,952	+				-0.6
2,713,952	+				+0.0
2,713,952	+				+1.7
2,713,952	+				-0.8
2,713,952	+				-1.3
2,713,952	+				+0.3
2,713,952	+				+0.4
2,713,952	+				+0.0
2,713,952	+				-0.3
2,713,952	+				-1.8
2,713,952	+				-0.7
2,713,952	+				-0.3
2,713,952	+				-1.5
2,713,952	+				-1.1
2,713,953	-				+2.2
2,713,953	-				+1.2
2,713,953	-				-0.1
2,713,953	-				-0.2
2,713,953	-				-0.3
2,713,953	-				-0.9
2,713,953	-				+0.3
2,713,953	-				-0.9
2,713,953	-				+0.8
2,713,953	-				+0.6
2,714,241	-		MPMX19_02596	0.33	-0.5
2,714,483	+		MPMX19_02596	0.53	+0.0
2,714,483	+		MPMX19_02596	0.53	-2.0
2,714,483	+		MPMX19_02596	0.53	-2.0
2,714,483	+		MPMX19_02596	0.53	-0.2
2,714,483	+		MPMX19_02596	0.53	-0.6
2,714,483	+		MPMX19_02596	0.53	-0.3
2,714,483	+		MPMX19_02596	0.53	+0.7
2,714,483	+		MPMX19_02596	0.53	+0.4
2,714,483	+		MPMX19_02596	0.53	-0.4
2,714,483	+		MPMX19_02596	0.53	+0.2
2,714,483	+		MPMX19_02596	0.53	-0.5
2,714,483	+		MPMX19_02596	0.53	+1.5
2,714,483	+		MPMX19_02596	0.53	-1.3
2,714,483	+		MPMX19_02596	0.53	-0.6
2,714,483	+		MPMX19_02596	0.53	-0.0
2,714,483	+		MPMX19_02596	0.53	-2.1
2,714,483	+		MPMX19_02596	0.53	-1.0
2,714,483	+		MPMX19_02596	0.53	+0.7
2,714,484	-		MPMX19_02596	0.53	-1.6
2,714,484	-		MPMX19_02596	0.53	-0.8
2,714,484	-		MPMX19_02596	0.53	+1.0
2,714,484	-		MPMX19_02596	0.53	-0.3
2,714,484	-		MPMX19_02596	0.53	-1.1
2,714,484	-		MPMX19_02596	0.53	-0.2
2,714,484	-		MPMX19_02596	0.53	+0.1
2,714,484	-		MPMX19_02596	0.53	+0.5
2,714,484	-		MPMX19_02596	0.53	-0.5
2,714,513	+		MPMX19_02596	0.55	-1.2
2,714,513	+		MPMX19_02596	0.55	-0.8
2,714,514	-		MPMX19_02596	0.55	+0.3
2,714,514	-		MPMX19_02596	0.55	-0.5
2,714,514	-		MPMX19_02596	0.55	+0.0
2,714,514	-		MPMX19_02596	0.55	-0.7
2,714,514	-		MPMX19_02596	0.55	-1.0
2,714,621	+		MPMX19_02596	0.64	+0.8
2,714,622	-		MPMX19_02596	0.64	+0.0
2,714,622	-		MPMX19_02596	0.64	-0.5
2,714,622	-		MPMX19_02596	0.64	+1.1
2,714,622	-		MPMX19_02596	0.64	-1.3
2,714,622	-		MPMX19_02596	0.64	-0.3
2,714,622	-		MPMX19_02596	0.64	-1.6
2,714,672	+		MPMX19_02596	0.69	+0.3
2,714,672	+		MPMX19_02596	0.69	+0.8
2,714,672	+		MPMX19_02596	0.69	-1.8
2,714,672	+		MPMX19_02596	0.69	+1.2
2,714,672	+		MPMX19_02596	0.69	+0.4
2,714,673	-		MPMX19_02596	0.69	-0.7
2,714,673	-		MPMX19_02596	0.69	-0.8
2,714,673	-		MPMX19_02596	0.69	-0.2
2,714,701	+		MPMX19_02596	0.71	-0.6
2,714,701	+		MPMX19_02596	0.71	-1.1
2,714,701	+		MPMX19_02596	0.71	-0.3
2,714,701	+		MPMX19_02596	0.71	-0.3
2,714,702	-		MPMX19_02596	0.71	-0.2
2,714,702	-		MPMX19_02596	0.71	+1.0
2,714,702	-		MPMX19_02596	0.71	+0.2