Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02546

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,660,900	-		MPMX19_02544	0.74	-1.5
2,660,900	-		MPMX19_02544	0.74	-0.9
2,661,215	+		MPMX19_02545	0.26	-1.2
2,661,711	+				-0.8
2,661,712	-				-2.1
2,661,712	-				+0.2
2,661,712	-				+0.0
2,661,712	-				-1.5
2,661,712	-				+0.1
2,661,888	+		MPMX19_02546	0.21	-0.8
2,662,068	+		MPMX19_02546	0.48	-1.0
2,662,272	+		MPMX19_02546	0.78	-0.6
2,662,387	-				-2.6
2,662,458	+				-2.0
2,662,475	+				-0.3
2,662,476	-				+0.0
2,662,476	-				-1.8
2,662,476	-				+1.0
2,662,510	+				-0.3
2,662,510	+				-0.6
2,662,510	+				-1.0
2,662,510	+				+0.3
2,662,510	+				+0.0
2,662,511	-				-1.4
2,662,511	-				-0.2
2,662,511	-				+0.3
2,662,511	-				+0.0
2,662,511	-				-1.7
2,662,706	+		MPMX19_02547	0.13	-0.2
2,662,706	+		MPMX19_02547	0.13	-1.5
2,662,706	+		MPMX19_02547	0.13	-0.6
2,662,706	+		MPMX19_02547	0.13	+0.5
2,662,706	+		MPMX19_02547	0.13	+0.4
2,662,706	+		MPMX19_02547	0.13	-0.9
2,662,706	+		MPMX19_02547	0.13	-1.2
2,662,706	+		MPMX19_02547	0.13	-0.5
2,662,706	+		MPMX19_02547	0.13	+0.2
2,662,706	+		MPMX19_02547	0.13	-0.4
2,662,706	+		MPMX19_02547	0.13	+1.2
2,662,706	+		MPMX19_02547	0.13	-1.3
2,662,706	+		MPMX19_02547	0.13	-1.3
2,662,706	+		MPMX19_02547	0.13	-2.0
2,662,707	-		MPMX19_02547	0.13	+0.3
2,662,707	-		MPMX19_02547	0.13	+0.8
2,662,707	-		MPMX19_02547	0.13	+0.5
2,662,707	-		MPMX19_02547	0.13	+0.4
2,662,707	-		MPMX19_02547	0.13	-1.5
2,662,707	-		MPMX19_02547	0.13	-0.8
2,662,707	-		MPMX19_02547	0.13	+0.4
2,662,707	-		MPMX19_02547	0.13	-0.3
2,662,707	-		MPMX19_02547	0.13	+0.0
2,662,707	-		MPMX19_02547	0.13	+0.0
2,662,707	-		MPMX19_02547	0.13	-1.5
2,662,707	-		MPMX19_02547	0.13	+0.4
2,662,707	-		MPMX19_02547	0.13	-1.1
2,662,737	-		MPMX19_02547	0.15	+0.8
2,662,737	-		MPMX19_02547	0.15	+0.5
2,662,737	-		MPMX19_02547	0.15	+0.3
2,662,737	-		MPMX19_02547	0.15	-1.6
2,662,737	-		MPMX19_02547	0.15	-0.4
2,662,737	-		MPMX19_02547	0.15	-0.8
2,662,748	+		MPMX19_02547	0.16	+1.1
2,662,748	+		MPMX19_02547	0.16	-2.3
2,662,748	+		MPMX19_02547	0.16	+0.3
2,662,748	+		MPMX19_02547	0.16	+0.0
2,662,748	+		MPMX19_02547	0.16	+0.1
2,662,748	+		MPMX19_02547	0.16	+0.6
2,662,748	+		MPMX19_02547	0.16	-1.0
2,662,748	+		MPMX19_02547	0.16	+0.3
2,662,748	+		MPMX19_02547	0.16	+0.0
2,662,748	+		MPMX19_02547	0.16	-1.2
2,662,748	+		MPMX19_02547	0.16	-1.7
2,662,748	+		MPMX19_02547	0.16	-1.3
2,662,748	+		MPMX19_02547	0.16	-1.6
2,662,749	-		MPMX19_02547	0.16	-0.9
2,662,749	-		MPMX19_02547	0.16	+2.0
2,662,749	-		MPMX19_02547	0.16	-0.2
2,662,749	-		MPMX19_02547	0.16	-0.3
2,662,749	-		MPMX19_02547	0.16	-0.3
2,662,749	-		MPMX19_02547	0.16	+0.0
2,662,749	-		MPMX19_02547	0.16	-1.2
2,662,749	-		MPMX19_02547	0.16	-0.3
2,662,749	-		MPMX19_02547	0.16	+0.3
2,663,009	+		MPMX19_02547	0.33	+0.6
2,663,009	+		MPMX19_02547	0.33	+0.6
2,663,009	+		MPMX19_02547	0.33	-0.6
2,663,009	+		MPMX19_02547	0.33	-0.8
2,663,009	+		MPMX19_02547	0.33	+1.6
2,663,009	+		MPMX19_02547	0.33	-0.3
2,663,009	+		MPMX19_02547	0.33	-0.5
2,663,009	+		MPMX19_02547	0.33	-0.3
2,663,009	+		MPMX19_02547	0.33	-0.5
2,663,009	+		MPMX19_02547	0.33	+0.0
2,663,010	-		MPMX19_02547	0.33	-0.9
2,663,010	-		MPMX19_02547	0.33	-0.9
2,663,010	-		MPMX19_02547	0.33	+0.6
2,663,010	-		MPMX19_02547	0.33	+0.5
2,663,010	-		MPMX19_02547	0.33	-0.9
2,663,010	-		MPMX19_02547	0.33	+1.1
2,663,010	-		MPMX19_02547	0.33	-0.8
2,663,010	-		MPMX19_02547	0.33	-1.0
2,663,010	-		MPMX19_02547	0.33	-0.8
2,663,010	-		MPMX19_02547	0.33	+0.5
2,663,010	-		MPMX19_02547	0.33	+0.1
2,663,010	-		MPMX19_02547	0.33	-0.3
2,663,309	+		MPMX19_02547	0.52	-1.7
2,663,309	+		MPMX19_02547	0.52	+0.5
2,663,309	+		MPMX19_02547	0.52	+0.4
2,663,309	+		MPMX19_02547	0.52	-0.3
2,663,309	+		MPMX19_02547	0.52	+1.4
2,663,309	+		MPMX19_02547	0.52	+0.5
2,663,309	+		MPMX19_02547	0.52	-2.1
2,663,310	-		MPMX19_02547	0.52	-0.3
2,663,310	-		MPMX19_02547	0.52	+2.6
2,663,310	-		MPMX19_02547	0.52	-0.1
2,663,310	-		MPMX19_02547	0.52	-0.5