Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02543

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,658,991	+		MPMX19_02542	0.11	+0.8
2,659,944	+		MPMX19_02543	0.34	+0.3
2,659,944	+		MPMX19_02543	0.34	-0.6
2,659,945	-		MPMX19_02543	0.34	-1.3
2,659,945	-		MPMX19_02543	0.34	+0.0
2,659,945	-		MPMX19_02543	0.34	+0.6
2,660,037	+		MPMX19_02543	0.46	+0.7
2,660,037	+		MPMX19_02543	0.46	-0.3
2,660,428	-				-0.6
2,660,453	-				-1.0
2,660,453	-				-0.3
2,660,453	-				+1.0
2,660,453	-				-1.2
2,660,453	-				-1.9
2,660,453	-				+0.4
2,660,501	-				+0.4
2,660,501	-				-0.8
2,660,543	-				-0.9
2,660,543	-				+0.7
2,660,543	-				+1.0
2,660,543	-				+0.3
2,660,543	-				-1.6
2,660,543	-				+0.7
2,660,543	-				-0.1
2,660,543	-				-0.5
2,660,543	-				-1.1
2,660,543	-				-0.6
2,660,543	-				+0.3
2,660,543	-				-1.3
2,660,543	-				-0.2
2,660,543	-				+0.7
2,660,543	-				-0.6
2,660,543	-				-0.5
2,660,543	-				-0.2
2,660,543	-				-1.1
2,660,543	-				+0.4
2,660,543	-				+1.0
2,660,543	-				-1.3
2,660,543	-				-1.5
2,660,543	-				+0.0
2,660,545	+				-1.0
2,660,546	-				+1.3
2,660,546	-				-0.1
2,660,546	-				+1.4
2,660,546	-				-0.3
2,660,546	-				+0.2
2,660,546	-				+0.0
2,660,546	-				-0.1
2,660,546	-				-1.0
2,660,546	-				-1.7
2,660,546	-				-1.2
2,660,582	-		MPMX19_02544	0.15	-0.9
2,660,582	-		MPMX19_02544	0.15	-0.8
2,660,582	-		MPMX19_02544	0.15	-0.4
2,660,582	-		MPMX19_02544	0.15	-0.8
2,660,582	-		MPMX19_02544	0.15	+0.2
2,660,623	+		MPMX19_02544	0.23	-0.8
2,660,624	-		MPMX19_02544	0.23	-1.3
2,660,624	-		MPMX19_02544	0.23	-1.2
2,660,624	-		MPMX19_02544	0.23	+0.0
2,660,624	-		MPMX19_02544	0.23	+0.0
2,660,624	-		MPMX19_02544	0.23	-1.3
2,660,624	-		MPMX19_02544	0.23	-0.5
2,660,624	-		MPMX19_02544	0.23	+1.0
2,660,624	-		MPMX19_02544	0.23	-1.2
2,660,624	-		MPMX19_02544	0.23	+0.7
2,660,900	-		MPMX19_02544	0.74	-1.5
2,660,900	-		MPMX19_02544	0.74	-0.9
2,661,215	+		MPMX19_02545	0.26	-1.2