Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02378

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,501,229	+		MPMX19_02376	0.57	-0.1
2,501,229	+		MPMX19_02376	0.57	+0.0
2,501,229	+		MPMX19_02376	0.57	-0.4
2,501,229	+		MPMX19_02376	0.57	-0.0
2,501,229	+		MPMX19_02376	0.57	-1.9
2,501,230	-		MPMX19_02376	0.57	-0.6
2,501,230	-		MPMX19_02376	0.57	-0.1
2,501,251	+		MPMX19_02376	0.67	-1.6
2,501,251	+		MPMX19_02376	0.67	+0.7
2,501,251	+		MPMX19_02376	0.67	+1.2
2,501,252	-		MPMX19_02376	0.67	-1.0
2,501,252	-		MPMX19_02376	0.67	+0.5
2,501,252	-		MPMX19_02376	0.67	-0.4
2,501,252	-		MPMX19_02376	0.67	+0.6
2,501,252	-		MPMX19_02376	0.67	-2.4
2,501,252	-		MPMX19_02376	0.67	-2.8
2,501,252	-		MPMX19_02376	0.67	-0.4
2,501,253	+		MPMX19_02376	0.68	-0.0
2,501,253	+		MPMX19_02376	0.68	-0.4
2,501,253	+		MPMX19_02376	0.68	-0.2
2,501,254	-		MPMX19_02376	0.68	-1.7
2,501,254	-		MPMX19_02376	0.68	-0.9
2,501,254	-		MPMX19_02376	0.68	-0.4
2,501,254	-		MPMX19_02376	0.68	+0.2
2,501,254	-		MPMX19_02376	0.68	-1.4
2,501,254	-		MPMX19_02376	0.68	+1.1
2,501,289	+		MPMX19_02376	0.84	-0.9
2,501,289	+		MPMX19_02376	0.84	+0.4
2,501,289	+		MPMX19_02376	0.84	-1.2
2,501,290	-		MPMX19_02376	0.84	-2.2
2,501,290	-		MPMX19_02376	0.84	-0.4
2,501,290	-		MPMX19_02376	0.84	+0.2
2,501,290	-		MPMX19_02376	0.84	-0.9
2,501,290	-		MPMX19_02376	0.84	-0.4
2,501,323	+				-1.5
2,501,323	+				+0.4
2,501,384	+				+0.4
2,501,492	+				-2.0
2,501,492	+				+0.1
2,501,492	+				+1.6
2,501,492	+				+0.6
2,501,492	+				-0.7
2,501,492	+				-1.5
2,501,492	+				+0.6
2,501,492	+				-1.4
2,501,492	+				-1.7
2,501,492	+				-1.5
2,501,492	+				+0.7
2,501,492	+				-0.4
2,501,492	+				-0.5
2,501,492	+				+2.4
2,501,492	+				-1.0
2,501,492	+				+0.4
2,501,493	-				+1.0
2,501,493	-				+0.2
2,501,493	-				-1.0
2,501,493	-				+0.6
2,501,493	-				+1.0
2,501,493	-				+0.7
2,501,493	-				-0.5
2,501,493	-				-0.8
2,501,493	-				+2.4
2,501,493	-				-0.1
2,501,717	+				-0.1
2,501,717	+				-1.4
2,501,717	+				-0.7
2,501,717	+				-0.5
2,501,717	+				+0.7
2,501,717	+				-0.8
2,501,718	-				+0.3
2,501,718	-				-0.9
2,501,718	-				-0.8
2,501,718	-				-0.1
2,501,718	-				+0.2
2,501,839	+				-1.4
2,501,839	+				+0.2
2,501,839	+				-0.0
2,501,840	-				+0.6
2,501,891	+				-1.4
2,501,892	-				+0.2
2,501,916	+				-0.3
2,501,916	+				+0.2
2,501,916	+				-0.4
2,501,917	-				-0.7
2,501,917	-				-0.7
2,501,926	+				-0.4
2,501,951	-				+0.6
2,501,956	+				-0.3
2,501,963	-				-0.8
2,501,992	+				+1.5
2,501,993	-				-0.1
2,501,993	-				+1.6
2,501,993	-				-1.1
2,502,096	+				+2.0
2,502,096	+				-0.4
2,502,096	+				-1.9
2,502,096	+				-0.4
2,502,097	-				-1.4
2,502,097	-				-0.4
2,502,097	-				+0.2
2,502,134	+				-0.0
2,502,135	+				-0.4
2,502,135	+				+0.2
2,502,135	+				-0.7
2,502,135	+				+0.5
2,502,135	+				+2.0
2,502,135	+				+0.4
2,502,135	+				-0.0
2,502,135	+				-1.8
2,502,135	+				-0.6
2,502,136	-				-0.4
2,502,136	-				-0.8
2,502,136	-				-0.8
2,502,136	-				-0.1
2,502,136	-				-2.0
2,502,136	-				-0.9
2,502,136	-				+0.3
2,502,136	-				+0.0
2,502,136	-				+0.2
2,502,136	-				-0.5
2,502,136	-				+2.0
2,502,136	-				+0.4
2,502,136	-				+0.8
2,502,136	-				-1.2
2,502,183	+				-0.0
2,502,183	+				-0.0
2,502,390	+		MPMX19_02378	0.69	-2.0
2,502,390	+		MPMX19_02378	0.69	+0.2
2,502,390	+		MPMX19_02378	0.69	-0.4
2,502,390	+		MPMX19_02378	0.69	-1.7
2,502,391	-		MPMX19_02378	0.69	-0.8
2,502,391	-		MPMX19_02378	0.69	+0.4
2,502,391	-		MPMX19_02378	0.69	+0.6
2,502,539	+				-0.6
2,502,539	+				+0.2
2,502,539	+				-0.8
2,502,539	+				+0.1
2,502,539	+				-0.5
2,502,539	+				-0.6
2,502,539	+				-0.2
2,502,539	+				-0.0
2,502,539	+				-0.4
2,502,539	+				-0.1
2,502,539	+				+0.7
2,502,539	+				+0.1
2,502,539	+				-0.5
2,502,539	+				-0.6
2,502,539	+				-1.6
2,502,539	+				+1.0
2,502,539	+				-2.2
2,502,539	+				-0.4
2,502,539	+				+1.6
2,502,539	+				+2.5
2,502,539	+				-0.3
2,502,540	-				+0.6
2,502,540	-				-0.3
2,502,540	-				-0.3
2,502,540	-				-0.1
2,502,540	-				+0.6
2,502,540	-				+0.1
2,502,540	-				+1.4
2,502,540	-				+0.4
2,502,540	-				+1.2
2,502,540	-				+0.6
2,502,540	-				+0.0
2,502,540	-				+1.2
2,502,540	-				-0.1
2,502,540	-				-0.3
2,502,540	-				+0.2
2,502,540	-				-0.4
2,502,857	+		MPMX19_02379	0.41	-0.3
2,502,857	+		MPMX19_02379	0.41	+0.1
2,502,857	+		MPMX19_02379	0.41	+0.2
2,502,857	+		MPMX19_02379	0.41	+0.2
2,502,857	+		MPMX19_02379	0.41	-0.7
2,502,857	+		MPMX19_02379	0.41	+0.3
2,502,857	+		MPMX19_02379	0.41	+1.2
2,502,857	+		MPMX19_02379	0.41	-0.2
2,502,857	+		MPMX19_02379	0.41	-0.7
2,502,857	+		MPMX19_02379	0.41	-1.2
2,502,857	+		MPMX19_02379	0.41	-1.6
2,502,857	+		MPMX19_02379	0.41	+0.2
2,502,857	+		MPMX19_02379	0.41	-0.2
2,502,858	-		MPMX19_02379	0.41	+0.3
2,502,858	-		MPMX19_02379	0.41	-1.4
2,502,858	-		MPMX19_02379	0.41	-0.6
2,502,858	-		MPMX19_02379	0.41	-0.4
2,502,858	-		MPMX19_02379	0.41	-1.0
2,502,858	-		MPMX19_02379	0.41	-1.0
2,502,858	-		MPMX19_02379	0.41	-0.3
2,502,858	-		MPMX19_02379	0.41	-1.3
2,502,858	-		MPMX19_02379	0.41	+0.4
2,502,858	-		MPMX19_02379	0.41	-1.6
2,503,139	+		MPMX19_02379	0.76	-1.7