Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02372

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,494,816	+				-0.6
2,494,816	+				-2.0
2,494,816	+				+1.4
2,494,816	+				-2.5
2,494,816	+				-2.5
2,494,816	+				+0.4
2,494,816	+				-1.0
2,494,816	+				-3.1
2,494,816	+				-2.3
2,494,816	+				-0.2
2,494,816	+				+0.4
2,494,816	+				+1.0
2,494,817	-				-0.0
2,494,817	-				-0.5
2,494,817	-				+1.0
2,494,817	-				-1.2
2,494,817	-				-0.6
2,494,817	-				+0.3
2,494,817	-				+0.3
2,494,817	-				-1.2
2,494,817	-				+1.0
2,494,817	-				-0.1
2,494,881	-				-0.2
2,494,881	-				+0.4
2,494,881	-				-0.1
2,494,946	-				-0.8
2,494,961	-				-0.1
2,494,971	-				-2.0
2,495,006	+				-0.3
2,495,007	-				+1.0
2,495,010	-				-0.6
2,495,056	-				-0.8
2,495,056	-				-0.4
2,495,318	+		MPMX19_02371	0.42	-0.2
2,495,318	+		MPMX19_02371	0.42	+1.2
2,495,318	+		MPMX19_02371	0.42	-0.3
2,495,318	+		MPMX19_02371	0.42	+0.6
2,495,318	+		MPMX19_02371	0.42	-0.8
2,495,318	+		MPMX19_02371	0.42	-0.5
2,495,318	+		MPMX19_02371	0.42	-1.2
2,495,319	-		MPMX19_02371	0.42	-2.1
2,495,319	-		MPMX19_02371	0.42	+0.2
2,495,319	-		MPMX19_02371	0.42	+0.5
2,495,319	-		MPMX19_02371	0.42	-0.4
2,495,319	-		MPMX19_02371	0.42	+0.0
2,495,336	+		MPMX19_02371	0.45	-0.6
2,495,336	+		MPMX19_02371	0.45	-2.4
2,495,336	+		MPMX19_02371	0.45	-0.0
2,495,336	+		MPMX19_02371	0.45	-0.0
2,495,336	+		MPMX19_02371	0.45	-0.4
2,495,336	+		MPMX19_02371	0.45	-0.0
2,495,336	+		MPMX19_02371	0.45	+1.3
2,495,336	+		MPMX19_02371	0.45	-0.9
2,495,336	+		MPMX19_02371	0.45	+2.1
2,495,336	+		MPMX19_02371	0.45	-2.4
2,495,336	+		MPMX19_02371	0.45	-1.2
2,495,336	+		MPMX19_02371	0.45	+2.4
2,495,337	-		MPMX19_02371	0.46	-0.0
2,495,337	-		MPMX19_02371	0.46	-0.3
2,495,337	-		MPMX19_02371	0.46	+1.7
2,495,337	-		MPMX19_02371	0.46	+0.2
2,495,337	-		MPMX19_02371	0.46	-1.7
2,495,337	-		MPMX19_02371	0.46	+0.5
2,495,337	-		MPMX19_02371	0.46	-1.7
2,495,337	-		MPMX19_02371	0.46	-1.1
2,495,337	-		MPMX19_02371	0.46	-0.0
2,495,337	-		MPMX19_02371	0.46	+0.0
2,495,337	-		MPMX19_02371	0.46	-0.4
2,495,337	-		MPMX19_02371	0.46	-0.1
2,495,375	+		MPMX19_02371	0.53	+1.0
2,495,376	-		MPMX19_02371	0.54	-2.1
2,495,376	-		MPMX19_02371	0.54	+1.3
2,495,495	+		MPMX19_02371	0.78	+1.0
2,495,495	+		MPMX19_02371	0.78	-2.5
2,495,495	+		MPMX19_02371	0.78	-0.4
2,495,521	+		MPMX19_02371	0.84	-1.0
2,495,521	+		MPMX19_02371	0.84	-0.5
2,495,521	+		MPMX19_02371	0.84	-1.7
2,495,521	+		MPMX19_02371	0.84	+0.9
2,495,521	+		MPMX19_02371	0.84	+0.5
2,495,521	+		MPMX19_02371	0.84	-0.4
2,495,521	+		MPMX19_02371	0.84	+0.2
2,495,521	+		MPMX19_02371	0.84	+1.1
2,495,521	+		MPMX19_02371	0.84	+0.8
2,495,521	+		MPMX19_02371	0.84	-0.5
2,495,521	+		MPMX19_02371	0.84	+0.6
2,495,521	+		MPMX19_02371	0.84	-0.6
2,495,522	-		MPMX19_02371	0.84	+0.7
2,495,522	-		MPMX19_02371	0.84	+0.7
2,495,522	-		MPMX19_02371	0.84	-0.4
2,495,522	-		MPMX19_02371	0.84	+0.5
2,495,522	-		MPMX19_02371	0.84	+1.4
2,495,522	-		MPMX19_02371	0.84	-0.5
2,495,522	-		MPMX19_02371	0.84	-0.8
2,495,522	-		MPMX19_02371	0.84	-1.5
2,495,522	-		MPMX19_02371	0.84	+0.2
2,495,522	-		MPMX19_02371	0.84	-0.6
2,495,522	-		MPMX19_02371	0.84	-1.0
2,495,543	+		MPMX19_02371	0.88	-0.3
2,495,543	+		MPMX19_02371	0.88	-2.4
2,495,543	+		MPMX19_02371	0.88	-0.8
2,495,543	+		MPMX19_02371	0.88	-0.4
2,495,543	+		MPMX19_02371	0.88	+0.7
2,495,543	+		MPMX19_02371	0.88	-0.6
2,495,543	+		MPMX19_02371	0.88	-1.4
2,495,543	+		MPMX19_02371	0.88	-1.8
2,495,543	+		MPMX19_02371	0.88	-0.8
2,495,543	+		MPMX19_02371	0.88	-0.5
2,495,543	+		MPMX19_02371	0.88	+0.0
2,495,543	+		MPMX19_02371	0.88	-0.5
2,495,543	+		MPMX19_02371	0.88	-1.5
2,495,544	-		MPMX19_02371	0.88	-0.5
2,495,544	-		MPMX19_02371	0.88	-0.4
2,495,544	-		MPMX19_02371	0.88	-0.0
2,495,544	-		MPMX19_02371	0.88	+0.6
2,495,544	-		MPMX19_02371	0.88	-0.6
2,495,544	-		MPMX19_02371	0.88	-0.0
2,495,544	-		MPMX19_02371	0.88	+0.0
2,495,544	-		MPMX19_02371	0.88	-0.8
2,495,544	-		MPMX19_02371	0.88	-0.0
2,495,579	+				-0.7
2,495,579	+				-0.2
2,495,579	+				-0.3
2,495,579	+				+1.0
2,495,579	+				+0.4
2,495,579	+				-0.8
2,495,579	+				-0.4
2,495,579	+				+0.0
2,495,579	+				+0.7
2,495,579	+				-1.1
2,495,579	+				-0.2
2,495,580	-				-1.0
2,495,580	-				-0.9
2,495,580	-				-0.5
2,495,580	-				-0.6
2,495,580	-				+0.1
2,495,580	-				+1.2
2,495,580	-				-0.9
2,495,580	-				+0.1
2,495,580	-				-0.6
2,495,580	-				+0.5
2,495,580	-				+0.3
2,495,580	-				+0.2
2,495,591	+				-1.4
2,495,591	+				-0.3
2,495,591	+				-1.3
2,495,591	+				-0.5
2,495,591	+				+0.4
2,495,591	+				-1.4
2,495,591	+				-0.7
2,495,591	+				-1.0
2,495,591	+				-0.8
2,495,591	+				-1.3
2,495,591	+				-1.1
2,495,591	+				-0.2
2,495,591	+				+0.2
2,495,591	+				-0.1
2,495,591	+				+0.2
2,495,591	+				-0.8
2,495,591	+				-1.1
2,495,591	+				-1.4
2,495,591	+				+0.0
2,495,591	+				+0.8
2,495,591	+				+1.2
2,495,591	+				-1.2
2,495,591	+				-2.1
2,495,591	+				-1.6
2,495,591	+				+0.5
2,495,591	+				-0.5
2,495,592	-				-1.6
2,495,592	-				+0.3
2,495,592	-				-0.4
2,495,592	-				-0.1
2,495,592	-				-0.4
2,495,592	-				-0.7
2,495,592	-				-0.2
2,495,592	-				-1.5
2,495,592	-				-0.3
2,495,592	-				-0.3
2,495,592	-				-1.2
2,495,592	-				-1.1
2,495,592	-				-0.0
2,495,592	-				+0.4
2,495,592	-				+0.2
2,495,592	-				-1.2
2,495,592	-				+1.3
2,495,592	-				-1.0
2,495,592	-				+1.6
2,495,592	-				-0.0
2,495,592	-				+0.2
2,495,592	-				+0.6
2,495,592	-				-1.6
2,495,592	-				+0.7
2,495,592	-				+0.4
2,495,611	+				-0.6
2,495,612	-				+0.1
2,495,612	-				+0.6
2,495,612	-				-1.4
2,495,630	+				-0.5
2,495,846	+		MPMX19_02372	0.11	-0.4
2,495,846	+		MPMX19_02372	0.11	+0.4
2,495,846	+		MPMX19_02372	0.11	-0.8
2,495,846	+		MPMX19_02372	0.11	-0.8
2,495,846	+		MPMX19_02372	0.11	-0.5
2,495,847	-		MPMX19_02372	0.11	-1.6
2,495,847	-		MPMX19_02372	0.11	-0.2
2,495,847	-		MPMX19_02372	0.11	+0.9
2,495,847	-		MPMX19_02372	0.11	+0.7
2,495,847	-		MPMX19_02372	0.11	-0.2
2,495,847	-		MPMX19_02372	0.11	-0.2
2,495,847	-		MPMX19_02372	0.11	-0.0
2,495,847	-		MPMX19_02372	0.11	+2.6
2,495,869	+		MPMX19_02372	0.12	-0.1
2,495,869	+		MPMX19_02372	0.12	+0.4
2,495,869	+		MPMX19_02372	0.12	+1.2
2,495,869	+		MPMX19_02372	0.12	-0.4
2,495,869	+		MPMX19_02372	0.12	-0.4
2,495,869	+		MPMX19_02372	0.12	-0.5
2,495,869	+		MPMX19_02372	0.12	+0.7
2,495,869	+		MPMX19_02372	0.12	-0.6
2,495,869	+		MPMX19_02372	0.12	+0.3
2,495,869	+		MPMX19_02372	0.12	-2.4
2,495,869	+		MPMX19_02372	0.12	-0.7
2,495,869	+		MPMX19_02372	0.12	-0.5
2,495,869	+		MPMX19_02372	0.12	-0.3
2,495,870	-		MPMX19_02372	0.12	+1.7
2,495,870	-		MPMX19_02372	0.12	-0.0
2,495,870	-		MPMX19_02372	0.12	+0.7
2,495,870	-		MPMX19_02372	0.12	+0.9
2,495,870	-		MPMX19_02372	0.12	-0.8
2,495,870	-		MPMX19_02372	0.12	-1.2
2,495,870	-		MPMX19_02372	0.12	-1.4
2,495,870	-		MPMX19_02372	0.12	+2.3
2,495,870	-		MPMX19_02372	0.12	-0.8
2,495,870	-		MPMX19_02372	0.12	+1.1
2,495,870	-		MPMX19_02372	0.12	+1.2
2,495,870	-		MPMX19_02372	0.12	-0.9
2,495,870	-		MPMX19_02372	0.12	-2.2
2,496,067	+		MPMX19_02372	0.23	-1.4
2,496,067	+		MPMX19_02372	0.23	+0.5
2,496,067	+		MPMX19_02372	0.23	-0.1
2,496,067	+		MPMX19_02372	0.23	+0.6
2,496,067	+		MPMX19_02372	0.23	-0.4
2,496,067	+		MPMX19_02372	0.23	+0.2
2,496,067	+		MPMX19_02372	0.23	-0.6
2,496,068	-		MPMX19_02372	0.24	+0.3
2,496,068	-		MPMX19_02372	0.24	-1.2
2,497,343	+				-0.8
2,497,343	+				-0.4
2,497,343	+				-0.0
2,497,343	+				-0.0
2,497,343	+				-1.1
2,497,344	-				-1.7
2,497,344	-				-1.4
2,497,344	-				-1.4
2,497,344	-				-0.8
2,497,344	-				+1.0
2,497,411	-				-0.1
2,497,521	-				-0.0
2,497,521	-				-0.6
2,497,531	+				-1.0
2,497,531	+				-0.7
2,497,531	+				-0.0
2,497,531	+				+1.2
2,497,531	+				+0.1
2,497,532	-				-0.5
2,497,532	-				-1.8
2,497,532	-				+0.6
2,497,532	-				-1.6
2,497,532	-				-1.0
2,497,532	-				+0.1
2,497,532	-				-0.8
2,497,532	-				-2.4
2,497,651	+		MPMX19_02373	0.19	+0.6
2,497,651	+		MPMX19_02373	0.19	-0.1
2,497,651	+		MPMX19_02373	0.19	+0.6
2,497,651	+		MPMX19_02373	0.19	+0.4
2,497,651	+		MPMX19_02373	0.19	-1.1
2,497,651	+		MPMX19_02373	0.19	-1.9
2,497,651	+		MPMX19_02373	0.19	+0.4
2,497,651	+		MPMX19_02373	0.19	-0.6
2,497,651	+		MPMX19_02373	0.19	-1.8
2,497,651	+		MPMX19_02373	0.19	-1.4
2,497,651	+		MPMX19_02373	0.19	+0.7
2,497,652	-		MPMX19_02373	0.19	+0.5
2,497,652	-		MPMX19_02373	0.19	-0.3
2,497,652	-		MPMX19_02373	0.19	-0.5
2,497,652	-		MPMX19_02373	0.19	-0.4
2,497,652	-		MPMX19_02373	0.19	-1.6
2,497,729	+		MPMX19_02373	0.35	-0.8
2,497,729	+		MPMX19_02373	0.35	+1.3
2,497,729	+		MPMX19_02373	0.35	-1.8
2,497,729	+		MPMX19_02373	0.35	-1.6
2,497,729	+		MPMX19_02373	0.35	+0.6
2,497,729	+		MPMX19_02373	0.35	+1.0
2,497,729	+		MPMX19_02373	0.35	-0.0
2,497,730	-		MPMX19_02373	0.35	+0.5
2,497,730	-		MPMX19_02373	0.35	+0.8
2,497,730	-		MPMX19_02373	0.35	-0.8
2,497,730	-		MPMX19_02373	0.35	-0.1
2,497,730	-		MPMX19_02373	0.35	+0.6
2,497,730	-		MPMX19_02373	0.35	-0.6
2,497,730	-		MPMX19_02373	0.35	+0.8
2,497,730	-		MPMX19_02373	0.35	-1.0
2,497,731	+		MPMX19_02373	0.36	-2.1
2,497,731	+		MPMX19_02373	0.36	+0.4
2,497,731	+		MPMX19_02373	0.36	-0.6
2,497,731	+		MPMX19_02373	0.36	+0.2
2,497,731	+		MPMX19_02373	0.36	+0.3
2,497,731	+		MPMX19_02373	0.36	-0.2
2,497,731	+		MPMX19_02373	0.36	+0.3
2,497,731	+		MPMX19_02373	0.36	-0.5
2,497,731	+		MPMX19_02373	0.36	+0.6
2,497,731	+		MPMX19_02373	0.36	+1.0
2,497,731	+		MPMX19_02373	0.36	+0.2
2,497,731	+		MPMX19_02373	0.36	-1.7
2,497,732	-		MPMX19_02373	0.36	-0.6
2,497,732	-		MPMX19_02373	0.36	+0.4
2,497,732	-		MPMX19_02373	0.36	-0.2
2,497,732	-		MPMX19_02373	0.36	+0.0
2,497,732	-		MPMX19_02373	0.36	-1.9
2,497,732	-		MPMX19_02373	0.36	-1.2
2,497,732	-		MPMX19_02373	0.36	+0.5
2,497,732	-		MPMX19_02373	0.36	-0.6
2,497,732	-		MPMX19_02373	0.36	+0.7
2,497,732	-		MPMX19_02373	0.36	+1.0
2,497,732	-		MPMX19_02373	0.36	+0.1
2,497,732	-		MPMX19_02373	0.36	+0.0
2,497,732	-		MPMX19_02373	0.36	+0.3
2,497,732	-		MPMX19_02373	0.36	+0.3
2,497,732	-		MPMX19_02373	0.36	+1.1
2,497,732	-		MPMX19_02373	0.36	+0.1
2,497,732	-		MPMX19_02373	0.36	-1.4
2,497,732	-		MPMX19_02373	0.36	-0.8
2,497,770	+		MPMX19_02373	0.44	-0.8
2,497,770	+		MPMX19_02373	0.44	+0.8
2,497,771	-		MPMX19_02373	0.44	-1.7
2,498,012	+				-0.0
2,498,012	+				+1.5
2,498,012	+				+0.1
2,498,012	+				-0.4
2,498,012	+				-1.5
2,498,013	-				-2.3
2,498,013	-				-0.1
2,498,013	-				+1.0
2,498,013	-				-0.5
2,498,029	+				-0.3
2,498,029	+				-0.1
2,498,029	+				+0.1
2,498,029	+				-0.1
2,498,029	+				-0.0
2,498,029	+				-0.4
2,498,029	+				-1.4
2,498,029	+				-1.1
2,498,029	+				-0.2
2,498,029	+				+0.8
2,498,029	+				-0.6
2,498,029	+				+0.7
2,498,030	-				-0.6
2,498,030	-				+1.2
2,498,030	-				-0.5
2,498,030	-				-1.5
2,498,030	-				-0.4
2,498,129	-				-1.0
2,498,133	-				-0.3
2,498,133	-				-0.4
2,498,133	-				-1.5
2,498,148	+				-0.4
2,498,148	+				-1.2
2,498,148	+				-1.8
2,498,149	-				+0.2
2,498,149	-				+0.5
2,498,149	-				+0.6
2,498,149	-				-0.5
2,498,272	+				+0.8
2,498,272	+				-1.7
2,498,273	-				-0.1
2,498,273	-				-1.6
2,498,273	-				-0.4
2,498,273	-				+1.8
2,498,273	-				+0.6
2,498,273	-				-0.1