Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02246

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,362,545	+				-0.9
2,362,545	+				+0.9
2,362,545	+				-0.1
2,362,545	+				+0.5
2,362,545	+				-1.2
2,362,545	+				+0.4
2,362,545	+				-0.2
2,362,545	+				+0.6
2,362,545	+				+0.8
2,362,546	-				+0.1
2,362,546	-				-0.3
2,362,546	-				-0.8
2,362,546	-				-0.0
2,362,546	-				-0.7
2,362,546	-				-0.2
2,362,546	-				-1.2
2,362,546	-				-2.3
2,362,546	-				+0.1
2,362,846	-		MPMX19_02245	0.30	-1.2
2,362,846	-		MPMX19_02245	0.30	+1.2
2,362,846	-		MPMX19_02245	0.30	-0.2
2,363,107	-		MPMX19_02245	0.60	+0.1
2,363,453	-				-0.1
2,363,671	+		MPMX19_02246	0.48	-0.6
2,363,671	+		MPMX19_02246	0.48	+0.4
2,363,671	+		MPMX19_02246	0.48	-0.6
2,363,671	+		MPMX19_02246	0.48	-0.9
2,363,671	+		MPMX19_02246	0.48	+0.1
2,363,671	+		MPMX19_02246	0.48	+0.2
2,363,671	+		MPMX19_02246	0.48	-1.8
2,363,671	+		MPMX19_02246	0.48	-0.7
2,363,671	+		MPMX19_02246	0.48	+0.3
2,363,671	+		MPMX19_02246	0.48	-0.1
2,363,671	+		MPMX19_02246	0.48	-1.5
2,363,672	-		MPMX19_02246	0.48	-1.2
2,363,672	-		MPMX19_02246	0.48	-1.1
2,363,672	-		MPMX19_02246	0.48	-0.6
2,363,672	-		MPMX19_02246	0.48	-0.9
2,363,672	-		MPMX19_02246	0.48	+0.3
2,363,672	-		MPMX19_02246	0.48	-0.3
2,363,672	-		MPMX19_02246	0.48	-1.0
2,363,672	-		MPMX19_02246	0.48	-0.6
2,363,672	-		MPMX19_02246	0.48	-1.8
2,363,672	-		MPMX19_02246	0.48	-1.0
2,363,672	-		MPMX19_02246	0.48	-0.8
2,363,925	+				+1.7
2,363,926	-				-1.2
2,363,926	-				-0.9
2,363,926	-				-1.1
2,363,926	-				-0.4
2,363,926	-				-1.9
2,363,926	-				-0.1
2,364,010	+				-0.5
2,364,010	+				+0.4
2,364,010	+				-1.5
2,364,010	+				+0.2
2,364,010	+				-1.0
2,364,010	+				-0.8
2,364,010	+				-0.6
2,364,010	+				+0.4
2,364,010	+				+0.5
2,364,010	+				+1.6
2,364,010	+				-0.3
2,364,010	+				-2.1
2,364,010	+				-0.6
2,364,010	+				+0.2
2,364,010	+				-0.5
2,364,010	+				-0.6
2,364,010	+				+0.7
2,364,010	+				-0.1
2,364,010	+				-0.9
2,364,010	+				+0.0
2,364,010	+				-0.2
2,364,010	+				-0.7
2,364,010	+				-2.0
2,364,010	+				+0.1
2,364,010	+				+2.7
2,364,010	+				-0.5
2,364,010	+				+1.5
2,364,010	+				+0.8
2,364,010	+				+0.5
2,364,010	+				+0.9
2,364,010	+				-1.4
2,364,010	+				-2.0
2,364,010	+				-1.4
2,364,010	+				-0.7
2,364,010	+				-0.8
2,364,010	+				+0.3
2,364,010	+				+0.2
2,364,010	+				+0.9
2,364,010	+				+0.1
2,364,011	-				+0.2
2,364,011	-				-0.4
2,364,011	-				+0.4
2,364,011	-				+0.2
2,364,011	-				-0.1
2,364,011	-				+0.6
2,364,011	-				+0.5
2,364,011	-				-2.1
2,364,011	-				-0.4
2,364,011	-				-0.8
2,364,011	-				+0.0
2,364,011	-				-2.2
2,364,011	-				-1.4
2,364,011	-				+0.1
2,364,011	-				-0.8
2,364,011	-				-0.4
2,364,011	-				+1.1
2,364,011	-				+1.7
2,364,011	-				+0.2
2,364,011	-				-1.2
2,364,011	-				-0.2
2,364,011	-				-0.4
2,364,011	-				-0.3
2,364,011	-				-1.2
2,364,011	-				-0.2
2,364,011	-				-1.1
2,364,011	-				-1.4
2,364,011	-				-1.8
2,364,011	-				-0.9
2,364,011	-				+0.4
2,364,011	-				+0.1
2,364,011	-				-2.1
2,364,011	-				-1.4
2,364,011	-				+0.8
2,364,011	-				+0.4
2,364,011	-				-0.4
2,364,011	-				-1.5
2,364,011	-				-1.2
2,364,087	+				-0.8
2,364,087	+				+0.3
2,364,282	-		MPMX19_02247	0.36	-0.1
2,364,296	-		MPMX19_02247	0.38	+0.5
2,364,311	+		MPMX19_02247	0.40	-1.2
2,364,311	+		MPMX19_02247	0.40	-1.2
2,364,311	+		MPMX19_02247	0.40	-0.9
2,364,311	+		MPMX19_02247	0.40	+0.9
2,364,311	+		MPMX19_02247	0.40	+0.4
2,364,311	+		MPMX19_02247	0.40	-1.9
2,364,311	+		MPMX19_02247	0.40	-0.2
2,364,311	+		MPMX19_02247	0.40	+1.3
2,364,311	+		MPMX19_02247	0.40	-1.4
2,364,311	+		MPMX19_02247	0.40	-0.4
2,364,311	+		MPMX19_02247	0.40	+0.3
2,364,311	+		MPMX19_02247	0.40	+1.3
2,364,311	+		MPMX19_02247	0.40	-0.5
2,364,311	+		MPMX19_02247	0.40	-0.4
2,364,311	+		MPMX19_02247	0.40	-1.4
2,364,311	+		MPMX19_02247	0.40	-0.3
2,364,311	+		MPMX19_02247	0.40	+0.6
2,364,311	+		MPMX19_02247	0.40	+0.4
2,364,311	+		MPMX19_02247	0.40	+0.5
2,364,311	+		MPMX19_02247	0.40	+0.7
2,364,311	+		MPMX19_02247	0.40	-0.5
2,364,311	+		MPMX19_02247	0.40	-1.6
2,364,311	+		MPMX19_02247	0.40	-1.0
2,364,311	+		MPMX19_02247	0.40	+0.6
2,364,311	+		MPMX19_02247	0.40	-0.6
2,364,311	+		MPMX19_02247	0.40	-0.1
2,364,311	+		MPMX19_02247	0.40	-2.0
2,364,311	+		MPMX19_02247	0.40	+0.4
2,364,311	+		MPMX19_02247	0.40	-2.1
2,364,311	+		MPMX19_02247	0.40	-0.1
2,364,311	+		MPMX19_02247	0.40	-1.1
2,364,312	-		MPMX19_02247	0.40	-0.1
2,364,312	-		MPMX19_02247	0.40	-1.2
2,364,312	-		MPMX19_02247	0.40	-1.8
2,364,312	-		MPMX19_02247	0.40	-0.9
2,364,312	-		MPMX19_02247	0.40	-0.8
2,364,312	-		MPMX19_02247	0.40	+0.7
2,364,312	-		MPMX19_02247	0.40	-1.1
2,364,312	-		MPMX19_02247	0.40	-0.9
2,364,312	-		MPMX19_02247	0.40	-0.6
2,364,312	-		MPMX19_02247	0.40	+0.7
2,364,312	-		MPMX19_02247	0.40	+0.4
2,364,312	-		MPMX19_02247	0.40	-1.5
2,364,312	-		MPMX19_02247	0.40	+0.1
2,364,312	-		MPMX19_02247	0.40	-1.5
2,364,312	-		MPMX19_02247	0.40	-1.2
2,364,312	-		MPMX19_02247	0.40	-1.6
2,364,312	-		MPMX19_02247	0.40	-0.6
2,364,312	-		MPMX19_02247	0.40	+0.3
2,364,312	-		MPMX19_02247	0.40	-0.5
2,364,312	-		MPMX19_02247	0.40	+0.8
2,364,312	-		MPMX19_02247	0.40	+0.1
2,364,312	-		MPMX19_02247	0.40	-1.4
2,364,312	-		MPMX19_02247	0.40	-1.5
2,364,312	-		MPMX19_02247	0.40	+0.6
2,364,312	-		MPMX19_02247	0.40	+0.5
2,364,343	+		MPMX19_02247	0.45	-0.1
2,364,343	+		MPMX19_02247	0.45	-0.8
2,364,344	-		MPMX19_02247	0.45	+0.9
2,364,365	+		MPMX19_02247	0.49	+0.1
2,364,365	+		MPMX19_02247	0.49	-0.5
2,364,366	-		MPMX19_02247	0.49	+0.7
2,364,366	-		MPMX19_02247	0.49	-1.0
2,364,366	-		MPMX19_02247	0.49	+0.1
2,364,366	-		MPMX19_02247	0.49	-0.6
2,364,366	-		MPMX19_02247	0.49	+0.4
2,364,366	-		MPMX19_02247	0.49	+0.5
2,364,366	-		MPMX19_02247	0.49	+0.7
2,364,366	-		MPMX19_02247	0.49	+0.1
2,364,482	+		MPMX19_02247	0.67	-0.5
2,364,482	+		MPMX19_02247	0.67	-1.1
2,364,482	+		MPMX19_02247	0.67	-0.6
2,364,482	+		MPMX19_02247	0.67	-0.2
2,364,482	+		MPMX19_02247	0.67	+0.9
2,364,482	+		MPMX19_02247	0.67	-0.9
2,364,482	+		MPMX19_02247	0.67	+1.5
2,364,483	-		MPMX19_02247	0.67	-0.6
2,364,483	-		MPMX19_02247	0.67	-1.5
2,364,483	-		MPMX19_02247	0.67	-2.9
2,364,483	-		MPMX19_02247	0.67	+0.1
2,364,483	-		MPMX19_02247	0.67	+1.4
2,364,483	-		MPMX19_02247	0.67	-0.0
2,364,483	-		MPMX19_02247	0.67	+0.9
2,364,483	-		MPMX19_02247	0.67	+0.2
2,364,533	+		MPMX19_02247	0.75	+0.5
2,364,533	+		MPMX19_02247	0.75	-1.0
2,364,533	+		MPMX19_02247	0.75	-1.0
2,364,533	+		MPMX19_02247	0.75	-0.1
2,364,533	+		MPMX19_02247	0.75	-0.5
2,364,533	+		MPMX19_02247	0.75	+0.1
2,364,533	+		MPMX19_02247	0.75	-0.3
2,364,534	-		MPMX19_02247	0.75	-0.4
2,364,534	-		MPMX19_02247	0.75	-0.3
2,364,560	+		MPMX19_02247	0.79	-0.1
2,364,561	-		MPMX19_02247	0.79	+0.5
2,364,568	+		MPMX19_02247	0.80	-1.9
2,364,568	+		MPMX19_02247	0.80	+0.9
2,364,568	+		MPMX19_02247	0.80	-0.9
2,364,568	+		MPMX19_02247	0.80	-1.2
2,364,568	+		MPMX19_02247	0.80	-0.6
2,364,568	+		MPMX19_02247	0.80	-1.2
2,364,568	+		MPMX19_02247	0.80	-0.9
2,364,569	-		MPMX19_02247	0.80	+1.5
2,364,569	-		MPMX19_02247	0.80	-0.2
2,364,569	-		MPMX19_02247	0.80	-2.2
2,364,569	-		MPMX19_02247	0.80	-0.9
2,364,602	+		MPMX19_02247	0.86	+0.0
2,364,602	+		MPMX19_02247	0.86	-0.4
2,364,602	+		MPMX19_02247	0.86	-2.0
2,364,602	+		MPMX19_02247	0.86	-0.2
2,364,602	+		MPMX19_02247	0.86	-0.7
2,364,602	+		MPMX19_02247	0.86	-2.1
2,364,602	+		MPMX19_02247	0.86	-0.8
2,364,602	+		MPMX19_02247	0.86	+0.9
2,364,603	-		MPMX19_02247	0.86	-0.6
2,364,603	-		MPMX19_02247	0.86	-2.1
2,364,603	-		MPMX19_02247	0.86	+0.4
2,364,603	-		MPMX19_02247	0.86	+0.1
2,364,603	-		MPMX19_02247	0.86	-1.6
2,364,603	-		MPMX19_02247	0.86	+0.6
2,364,603	-		MPMX19_02247	0.86	-0.4
2,364,603	-		MPMX19_02247	0.86	-1.1
2,364,603	-		MPMX19_02247	0.86	-0.1
2,364,603	-		MPMX19_02247	0.86	+0.5
2,364,603	-		MPMX19_02247	0.86	-0.2
2,364,603	-		MPMX19_02247	0.86	-0.1
2,364,618	-		MPMX19_02247	0.88	-0.0
2,364,629	+		MPMX19_02247	0.90	-0.5
2,364,629	+		MPMX19_02247	0.90	-0.1
2,364,629	+		MPMX19_02247	0.90	+0.1
2,364,629	+		MPMX19_02247	0.90	+0.4
2,364,629	+		MPMX19_02247	0.90	+0.8
2,364,629	+		MPMX19_02247	0.90	-0.5
2,364,629	+		MPMX19_02247	0.90	-0.1
2,364,629	+		MPMX19_02247	0.90	-1.2
2,364,629	+		MPMX19_02247	0.90	-0.6
2,364,629	+		MPMX19_02247	0.90	+0.2
2,364,629	+		MPMX19_02247	0.90	-0.6
2,364,629	+		MPMX19_02247	0.90	-1.2
2,364,629	+		MPMX19_02247	0.90	-2.1
2,364,629	+		MPMX19_02247	0.90	+0.4
2,364,629	+		MPMX19_02247	0.90	-1.0
2,364,630	-				-1.5
2,364,630	-				-0.1
2,364,630	-				-0.6
2,364,630	-				+1.3
2,364,630	-				-0.3
2,364,630	-				+0.4
2,364,630	-				+0.5
2,364,630	-				-0.2
2,364,630	-				-0.2
2,364,630	-				-0.9
2,364,630	-				-0.3
2,364,630	-				-0.8
2,364,653	+				-1.1
2,364,653	+				-0.4
2,364,653	+				-0.3
2,364,706	+				-1.1
2,364,706	+				-0.2
2,364,706	+				+0.3
2,364,706	+				+0.2
2,364,706	+				+0.4
2,364,706	+				+0.1
2,364,738	+				-0.6
2,364,738	+				-0.0
2,364,738	+				-1.4
2,364,738	+				-0.5
2,364,738	+				-0.8
2,364,739	-				-1.4
2,364,739	-				+0.6
2,364,739	-				-0.2
2,364,739	-				-0.1
2,364,739	-				+0.4
2,364,739	-				-0.6
2,364,739	-				+0.2
2,364,739	-				-1.5
2,364,739	-				-0.7
2,364,739	-				+0.4
2,364,774	+				-1.1
2,364,881	+				+0.9
2,364,881	+				-0.9
2,364,882	-				-0.6
2,364,882	-				+0.9