Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02140

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,237,534	+		MPMX19_02139	0.44	-2.2
2,237,534	+		MPMX19_02139	0.44	+0.6
2,237,534	+		MPMX19_02139	0.44	+1.3
2,237,534	+		MPMX19_02139	0.44	-0.4
2,237,534	+		MPMX19_02139	0.44	+1.1
2,237,534	+		MPMX19_02139	0.44	-1.8
2,237,534	+		MPMX19_02139	0.44	-0.9
2,237,534	+		MPMX19_02139	0.44	-0.2
2,237,534	+		MPMX19_02139	0.44	-0.1
2,237,534	+		MPMX19_02139	0.44	-0.7
2,237,534	+		MPMX19_02139	0.44	-2.9
2,237,534	+		MPMX19_02139	0.44	+1.1
2,237,534	+		MPMX19_02139	0.44	-0.4
2,237,534	+		MPMX19_02139	0.44	-0.7
2,237,534	+		MPMX19_02139	0.44	+0.3
2,237,534	+		MPMX19_02139	0.44	-0.6
2,237,534	+		MPMX19_02139	0.44	+0.4
2,237,534	+		MPMX19_02139	0.44	-0.0
2,237,534	+		MPMX19_02139	0.44	-0.4
2,237,534	+		MPMX19_02139	0.44	-0.5
2,237,534	+		MPMX19_02139	0.44	-1.6
2,237,534	+		MPMX19_02139	0.44	-2.1
2,237,534	+		MPMX19_02139	0.44	+1.6
2,237,534	+		MPMX19_02139	0.44	-1.1
2,237,534	+		MPMX19_02139	0.44	-2.5
2,237,534	+		MPMX19_02139	0.44	-1.2
2,237,535	-		MPMX19_02139	0.44	-0.7
2,237,535	-		MPMX19_02139	0.44	+0.9
2,237,535	-		MPMX19_02139	0.44	-0.4
2,237,535	-		MPMX19_02139	0.44	+0.6
2,237,535	-		MPMX19_02139	0.44	-0.9
2,237,535	-		MPMX19_02139	0.44	-1.4
2,237,535	-		MPMX19_02139	0.44	+0.0
2,237,535	-		MPMX19_02139	0.44	-0.1
2,237,535	-		MPMX19_02139	0.44	-0.1
2,237,535	-		MPMX19_02139	0.44	-0.4
2,237,535	-		MPMX19_02139	0.44	-0.7
2,237,535	-		MPMX19_02139	0.44	-0.7
2,237,535	-		MPMX19_02139	0.44	+1.1
2,237,535	-		MPMX19_02139	0.44	-0.6
2,237,535	-		MPMX19_02139	0.44	-0.9
2,237,535	-		MPMX19_02139	0.44	-0.7
2,237,535	-		MPMX19_02139	0.44	+0.9
2,237,535	-		MPMX19_02139	0.44	-0.8
2,237,535	-		MPMX19_02139	0.44	+0.9
2,237,618	+		MPMX19_02139	0.49	-0.8
2,237,618	+		MPMX19_02139	0.49	-0.0
2,237,618	+		MPMX19_02139	0.49	-0.7
2,237,618	+		MPMX19_02139	0.49	+1.2
2,237,618	+		MPMX19_02139	0.49	-0.5
2,237,619	-		MPMX19_02139	0.49	-0.7
2,237,619	-		MPMX19_02139	0.49	-0.9
2,237,619	-		MPMX19_02139	0.49	-0.5
2,237,666	+		MPMX19_02139	0.52	+0.6
2,237,666	+		MPMX19_02139	0.52	-0.3
2,237,666	+		MPMX19_02139	0.52	-0.4
2,237,666	+		MPMX19_02139	0.52	+0.1
2,237,666	+		MPMX19_02139	0.52	+0.2
2,237,666	+		MPMX19_02139	0.52	-1.3
2,237,666	+		MPMX19_02139	0.52	+0.9
2,237,666	+		MPMX19_02139	0.52	+0.1
2,237,666	+		MPMX19_02139	0.52	-1.7
2,237,666	+		MPMX19_02139	0.52	+0.1
2,237,666	+		MPMX19_02139	0.52	-3.0
2,237,666	+		MPMX19_02139	0.52	-1.7
2,237,666	+		MPMX19_02139	0.52	+0.9
2,237,666	+		MPMX19_02139	0.52	-0.0
2,237,667	-		MPMX19_02139	0.52	-1.9
2,237,667	-		MPMX19_02139	0.52	-0.4
2,237,667	-		MPMX19_02139	0.52	-0.4
2,237,667	-		MPMX19_02139	0.52	+0.1
2,237,667	-		MPMX19_02139	0.52	+1.2
2,237,667	-		MPMX19_02139	0.52	+0.2
2,237,667	-		MPMX19_02139	0.52	+0.2
2,237,667	-		MPMX19_02139	0.52	-0.2
2,237,667	-		MPMX19_02139	0.52	-1.6
2,237,667	-		MPMX19_02139	0.52	+0.3
2,237,667	-		MPMX19_02139	0.52	+0.6
2,237,667	-		MPMX19_02139	0.52	-1.3
2,237,667	-		MPMX19_02139	0.52	-1.8
2,237,667	-		MPMX19_02139	0.52	-1.3
2,237,668	+		MPMX19_02139	0.52	+0.9
2,237,668	+		MPMX19_02139	0.52	-1.9
2,237,668	+		MPMX19_02139	0.52	-0.1
2,237,668	+		MPMX19_02139	0.52	-0.1
2,237,668	+		MPMX19_02139	0.52	+0.7
2,237,668	+		MPMX19_02139	0.52	+0.9
2,237,668	+		MPMX19_02139	0.52	+1.9
2,237,668	+		MPMX19_02139	0.52	-1.6
2,237,668	+		MPMX19_02139	0.52	+0.4
2,237,668	+		MPMX19_02139	0.52	-0.2
2,237,668	+		MPMX19_02139	0.52	-1.9
2,237,668	+		MPMX19_02139	0.52	-0.1
2,237,668	+		MPMX19_02139	0.52	-0.6
2,237,668	+		MPMX19_02139	0.52	-0.4
2,237,668	+		MPMX19_02139	0.52	-0.9
2,237,668	+		MPMX19_02139	0.52	-0.2
2,237,668	+		MPMX19_02139	0.52	-0.6
2,237,669	-		MPMX19_02139	0.52	-1.2
2,237,669	-		MPMX19_02139	0.52	-1.3
2,237,669	-		MPMX19_02139	0.52	-1.3
2,237,669	-		MPMX19_02139	0.52	+0.6
2,237,669	-		MPMX19_02139	0.52	+0.9
2,237,669	-		MPMX19_02139	0.52	+0.1
2,237,669	-		MPMX19_02139	0.52	-0.1
2,237,669	-		MPMX19_02139	0.52	+0.0
2,237,669	-		MPMX19_02139	0.52	-1.1
2,237,669	-		MPMX19_02139	0.52	-1.4
2,237,669	-		MPMX19_02139	0.52	-1.1
2,237,669	-		MPMX19_02139	0.52	-0.3
2,237,669	-		MPMX19_02139	0.52	-1.1
2,237,669	-		MPMX19_02139	0.52	-0.4
2,237,669	-		MPMX19_02139	0.52	-1.2
2,237,669	-		MPMX19_02139	0.52	-1.3
2,237,669	-		MPMX19_02139	0.52	-0.8
2,237,669	-		MPMX19_02139	0.52	-2.7
2,237,669	-		MPMX19_02139	0.52	-1.0
2,237,669	-		MPMX19_02139	0.52	+0.4
2,237,669	-		MPMX19_02139	0.52	+1.4
2,237,762	+		MPMX19_02139	0.58	-0.3
2,237,762	+		MPMX19_02139	0.58	-2.9
2,237,763	-		MPMX19_02139	0.58	+0.0
2,237,763	-		MPMX19_02139	0.58	-0.7
2,237,763	-		MPMX19_02139	0.58	-1.1
2,237,763	-		MPMX19_02139	0.58	-2.3
2,237,763	-		MPMX19_02139	0.58	+0.5
2,237,978	+		MPMX19_02139	0.71	+0.4
2,237,978	+		MPMX19_02139	0.71	-0.8
2,237,978	+		MPMX19_02139	0.71	+0.2
2,237,978	+		MPMX19_02139	0.71	-0.8
2,237,978	+		MPMX19_02139	0.71	+0.6
2,237,978	+		MPMX19_02139	0.71	-1.5
2,237,978	+		MPMX19_02139	0.71	+0.2
2,237,978	+		MPMX19_02139	0.71	-2.1
2,237,978	+		MPMX19_02139	0.71	+0.1
2,237,978	+		MPMX19_02139	0.71	+0.2
2,237,978	+		MPMX19_02139	0.71	-0.7
2,237,978	+		MPMX19_02139	0.71	-0.7
2,237,978	+		MPMX19_02139	0.71	-3.1
2,237,978	+		MPMX19_02139	0.71	-0.9
2,237,978	+		MPMX19_02139	0.71	-0.3
2,237,978	+		MPMX19_02139	0.71	-0.9
2,237,978	+		MPMX19_02139	0.71	-0.9
2,237,978	+		MPMX19_02139	0.71	-0.7
2,237,978	+		MPMX19_02139	0.71	-2.0
2,237,978	+		MPMX19_02139	0.71	+0.5
2,237,978	+		MPMX19_02139	0.71	-0.8
2,237,978	+		MPMX19_02139	0.71	-1.6
2,237,978	+		MPMX19_02139	0.71	-0.2
2,237,979	-		MPMX19_02139	0.71	-0.2
2,237,979	-		MPMX19_02139	0.71	-0.2
2,237,979	-		MPMX19_02139	0.71	-0.6
2,237,979	-		MPMX19_02139	0.71	-1.0
2,237,979	-		MPMX19_02139	0.71	+0.7
2,237,979	-		MPMX19_02139	0.71	-2.6
2,237,979	-		MPMX19_02139	0.71	+0.3
2,237,979	-		MPMX19_02139	0.71	-1.4
2,237,979	-		MPMX19_02139	0.71	+0.2
2,237,979	-		MPMX19_02139	0.71	+0.0
2,237,979	-		MPMX19_02139	0.71	+1.0
2,237,979	-		MPMX19_02139	0.71	-1.1
2,237,979	-		MPMX19_02139	0.71	-1.3
2,237,979	-		MPMX19_02139	0.71	-0.0
2,237,979	-		MPMX19_02139	0.71	+0.1
2,237,979	-		MPMX19_02139	0.71	-1.6
2,237,979	-		MPMX19_02139	0.71	-0.9
2,237,979	-		MPMX19_02139	0.71	-0.3
2,237,979	-		MPMX19_02139	0.71	-0.4
2,237,979	-		MPMX19_02139	0.71	-0.4
2,237,979	-		MPMX19_02139	0.71	-2.3
2,237,979	-		MPMX19_02139	0.71	+0.5
2,237,979	-		MPMX19_02139	0.71	+0.0
2,238,110	+		MPMX19_02139	0.79	-1.3
2,238,110	+		MPMX19_02139	0.79	-1.6
2,238,110	+		MPMX19_02139	0.79	+0.1
2,238,110	+		MPMX19_02139	0.79	+1.2
2,238,110	+		MPMX19_02139	0.79	+0.4
2,238,110	+		MPMX19_02139	0.79	-0.8
2,238,110	+		MPMX19_02139	0.79	-1.5
2,238,111	-		MPMX19_02139	0.80	-0.2
2,238,111	-		MPMX19_02139	0.80	+0.9
2,238,111	-		MPMX19_02139	0.80	-1.9
2,238,111	-		MPMX19_02139	0.80	-1.0
2,238,111	-		MPMX19_02139	0.80	-1.2
2,238,111	-		MPMX19_02139	0.80	+1.5
2,238,111	-		MPMX19_02139	0.80	+1.6
2,238,111	-		MPMX19_02139	0.80	+0.2
2,238,111	-		MPMX19_02139	0.80	-0.1
2,238,111	-		MPMX19_02139	0.80	-0.7
2,238,111	-		MPMX19_02139	0.80	-0.9
2,238,112	+		MPMX19_02139	0.80	+0.6
2,238,112	+		MPMX19_02139	0.80	-0.5
2,238,112	+		MPMX19_02139	0.80	-1.3
2,238,112	+		MPMX19_02139	0.80	-1.1
2,238,112	+		MPMX19_02139	0.80	+0.7
2,238,112	+		MPMX19_02139	0.80	-0.9
2,238,112	+		MPMX19_02139	0.80	-0.2
2,238,113	-		MPMX19_02139	0.80	-0.9
2,238,113	-		MPMX19_02139	0.80	+0.4
2,238,113	-		MPMX19_02139	0.80	-0.1
2,238,113	-		MPMX19_02139	0.80	-1.0
2,238,113	-		MPMX19_02139	0.80	+0.1
2,238,113	-		MPMX19_02139	0.80	+0.3
2,238,113	-		MPMX19_02139	0.80	-0.8
2,238,323	+				+0.5
2,238,323	+				+1.3
2,238,323	+				-1.0
2,238,323	+				+1.3
2,238,323	+				-0.2
2,238,323	+				-0.2
2,238,323	+				-0.3
2,238,323	+				-0.7
2,238,324	-				-0.1
2,238,324	-				-0.1
2,238,324	-				+0.3
2,238,324	-				+0.5
2,238,324	-				+0.6
2,238,324	-				-0.3
2,238,324	-				+0.9
2,238,324	-				+1.4
2,238,324	-				-1.4
2,238,324	-				-1.1
2,238,338	+				-0.2
2,238,339	-				-1.4
2,238,339	-				+0.3
2,238,339	-				-0.3
2,238,413	+				-0.5
2,238,413	+				-0.3
2,238,413	+				-0.9
2,238,413	+				+0.1
2,238,413	+				-0.2
2,238,413	+				-0.5
2,238,413	+				+1.1
2,238,413	+				-0.1
2,238,413	+				-1.1
2,238,414	-				-0.3
2,238,414	-				-1.9
2,238,414	-				+0.2
2,238,414	-				-1.6
2,238,440	+				+1.3
2,238,440	+				-1.2
2,238,440	+				-0.0
2,238,440	+				+1.6
2,238,440	+				-0.9
2,238,440	+				-0.8
2,238,441	-				+0.4
2,238,441	-				+0.4
2,238,441	-				+0.2
2,238,632	+		MPMX19_02140	0.20	+1.6
2,238,632	+		MPMX19_02140	0.20	+0.9
2,238,632	+		MPMX19_02140	0.20	-0.5
2,238,632	+		MPMX19_02140	0.20	-1.2
2,238,632	+		MPMX19_02140	0.20	+1.9
2,238,632	+		MPMX19_02140	0.20	+2.1
2,238,633	-		MPMX19_02140	0.20	-0.8
2,238,633	-		MPMX19_02140	0.20	+0.1
2,238,633	-		MPMX19_02140	0.20	+0.3
2,238,633	-		MPMX19_02140	0.20	-0.5
2,238,755	+		MPMX19_02140	0.36	+1.5
2,238,756	-		MPMX19_02140	0.36	+0.3
2,238,756	-		MPMX19_02140	0.36	-1.5
2,238,756	-		MPMX19_02140	0.36	+0.1
2,238,756	-		MPMX19_02140	0.36	-0.2
2,238,830	+		MPMX19_02140	0.45	-0.6
2,238,830	+		MPMX19_02140	0.45	-1.7
2,238,830	+		MPMX19_02140	0.45	-0.9
2,238,831	-		MPMX19_02140	0.45	-1.4
2,238,831	-		MPMX19_02140	0.45	+0.9
2,238,884	+		MPMX19_02140	0.52	-0.2
2,238,884	+		MPMX19_02140	0.52	+1.3
2,238,884	+		MPMX19_02140	0.52	-0.0
2,238,884	+		MPMX19_02140	0.52	+0.2
2,238,884	+		MPMX19_02140	0.52	+1.1
2,238,884	+		MPMX19_02140	0.52	+1.3
2,238,884	+		MPMX19_02140	0.52	+0.0
2,238,884	+		MPMX19_02140	0.52	-0.0
2,238,884	+		MPMX19_02140	0.52	-0.3
2,238,884	+		MPMX19_02140	0.52	+0.9
2,238,884	+		MPMX19_02140	0.52	-0.4
2,238,884	+		MPMX19_02140	0.52	-1.8
2,238,884	+		MPMX19_02140	0.52	-0.6
2,238,884	+		MPMX19_02140	0.52	+0.1
2,238,884	+		MPMX19_02140	0.52	+0.3
2,238,884	+		MPMX19_02140	0.52	-0.3
2,238,885	-		MPMX19_02140	0.52	+0.2
2,238,885	-		MPMX19_02140	0.52	-0.4
2,238,885	-		MPMX19_02140	0.52	-0.5
2,238,885	-		MPMX19_02140	0.52	-0.7
2,238,885	-		MPMX19_02140	0.52	+0.0
2,238,885	-		MPMX19_02140	0.52	-0.9
2,238,885	-		MPMX19_02140	0.52	+0.1
2,238,885	-		MPMX19_02140	0.52	+0.7
2,238,885	-		MPMX19_02140	0.52	-0.2
2,238,885	-		MPMX19_02140	0.52	+0.6
2,238,885	-		MPMX19_02140	0.52	+0.8
2,238,885	-		MPMX19_02140	0.52	+0.4
2,238,885	-		MPMX19_02140	0.52	+0.2
2,238,885	-		MPMX19_02140	0.52	-0.3
2,238,885	-		MPMX19_02140	0.52	+0.9
2,238,983	+		MPMX19_02140	0.65	+0.8
2,238,983	+		MPMX19_02140	0.65	-1.1
2,238,983	+		MPMX19_02140	0.65	-0.0
2,238,984	-		MPMX19_02140	0.65	+0.3
2,238,984	-		MPMX19_02140	0.65	-1.1
2,238,984	-		MPMX19_02140	0.65	-0.7
2,239,163	+		MPMX19_02140	0.88	-0.6
2,239,163	+		MPMX19_02140	0.88	-0.1
2,239,163	+		MPMX19_02140	0.88	-0.7
2,239,163	+		MPMX19_02140	0.88	-0.4
2,239,163	+		MPMX19_02140	0.88	-0.7
2,239,164	-		MPMX19_02140	0.88	-0.8
2,239,164	-		MPMX19_02140	0.88	-0.2
2,239,164	-		MPMX19_02140	0.88	+0.8
2,239,164	-		MPMX19_02140	0.88	-1.3
2,239,164	-		MPMX19_02140	0.88	-1.9
2,239,164	-		MPMX19_02140	0.88	+0.6
2,239,164	-		MPMX19_02140	0.88	-1.7
2,239,185	-				+0.4
2,239,293	+				+0.5
2,239,293	+				+0.0
2,239,293	+				-0.2
2,239,294	-				+0.8
2,239,294	-				+1.7
2,239,294	-				+0.7
2,239,294	-				-1.4
2,239,294	-				-1.1
2,239,294	-				-1.1
2,239,294	-				-0.2
2,239,322	+				-0.4
2,239,322	+				-1.8