Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02088

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,184,795	+		MPMX19_02087	0.44	+0.6
2,184,795	+		MPMX19_02087	0.44	+1.9
2,184,795	+		MPMX19_02087	0.44	-0.1
2,184,795	+		MPMX19_02087	0.44	-0.6
2,184,795	+		MPMX19_02087	0.44	-0.4
2,184,813	+		MPMX19_02087	0.45	+0.3
2,184,813	+		MPMX19_02087	0.45	-0.8
2,184,813	+		MPMX19_02087	0.45	-2.1
2,184,813	+		MPMX19_02087	0.45	+0.9
2,184,813	+		MPMX19_02087	0.45	-0.1
2,184,813	+		MPMX19_02087	0.45	+1.2
2,184,954	+		MPMX19_02087	0.54	-1.5
2,184,954	+		MPMX19_02087	0.54	-2.2
2,184,954	+		MPMX19_02087	0.54	+0.1
2,184,954	+		MPMX19_02087	0.54	-1.5
2,184,954	+		MPMX19_02087	0.54	+0.4
2,184,954	+		MPMX19_02087	0.54	-2.1
2,184,954	+		MPMX19_02087	0.54	-1.6
2,184,954	+		MPMX19_02087	0.54	+1.6
2,184,954	+		MPMX19_02087	0.54	-0.8
2,184,954	+		MPMX19_02087	0.54	-0.1
2,184,954	+		MPMX19_02087	0.54	-2.9
2,184,954	+		MPMX19_02087	0.54	+0.2
2,184,984	+		MPMX19_02087	0.56	-1.7
2,184,984	+		MPMX19_02087	0.56	+0.1
2,184,984	+		MPMX19_02087	0.56	+1.0
2,184,984	+		MPMX19_02087	0.56	-0.3
2,184,984	+		MPMX19_02087	0.56	+1.0
2,185,053	+		MPMX19_02087	0.61	+1.1
2,185,086	+		MPMX19_02087	0.63	-1.0
2,185,086	+		MPMX19_02087	0.63	-0.4
2,185,086	+		MPMX19_02087	0.63	-1.1
2,185,086	+		MPMX19_02087	0.63	+0.3
2,185,086	+		MPMX19_02087	0.63	-0.6
2,185,086	+		MPMX19_02087	0.63	+1.0
2,185,086	+		MPMX19_02087	0.63	-1.0
2,185,086	+		MPMX19_02087	0.63	+0.4
2,185,086	+		MPMX19_02087	0.63	+0.4
2,185,086	+		MPMX19_02087	0.63	-1.3
2,185,086	+		MPMX19_02087	0.63	-0.2
2,185,086	+		MPMX19_02087	0.63	-0.8
2,185,086	+		MPMX19_02087	0.63	-2.3
2,185,086	+		MPMX19_02087	0.63	-1.6
2,185,086	+		MPMX19_02087	0.63	-1.0
2,185,086	+		MPMX19_02087	0.63	-0.1
2,185,086	+		MPMX19_02087	0.63	-1.1
2,185,086	+		MPMX19_02087	0.63	+0.3
2,185,116	+		MPMX19_02087	0.65	-2.5
2,185,116	+		MPMX19_02087	0.65	+0.3
2,185,116	+		MPMX19_02087	0.65	-1.1
2,185,116	+		MPMX19_02087	0.65	-0.1
2,185,116	+		MPMX19_02087	0.65	-1.6
2,185,116	+		MPMX19_02087	0.65	-0.1
2,185,116	+		MPMX19_02087	0.65	+1.9
2,185,116	+		MPMX19_02087	0.65	-1.8
2,185,116	+		MPMX19_02087	0.65	+0.2
2,185,116	+		MPMX19_02087	0.65	-0.5
2,185,116	+		MPMX19_02087	0.65	-1.5
2,185,116	+		MPMX19_02087	0.65	-0.0
2,185,116	+		MPMX19_02087	0.65	+1.2
2,185,116	+		MPMX19_02087	0.65	-0.1
2,185,116	+		MPMX19_02087	0.65	-0.3
2,185,116	+		MPMX19_02087	0.65	+1.3
2,185,116	+		MPMX19_02087	0.65	-1.7
2,185,116	+		MPMX19_02087	0.65	+0.5
2,185,116	+		MPMX19_02087	0.65	-0.6
2,185,116	+		MPMX19_02087	0.65	+0.2
2,185,540	+				-2.5
2,185,540	+				-0.7
2,185,540	+				+0.3
2,185,540	+				+0.8
2,185,540	+				-0.1
2,185,540	+				-1.4
2,185,540	+				+0.8
2,185,540	+				+1.1
2,185,540	+				-0.1
2,185,889	+		MPMX19_02088	0.12	-1.0
2,185,889	+		MPMX19_02088	0.12	-1.0
2,185,889	+		MPMX19_02088	0.12	-1.2
2,185,889	+		MPMX19_02088	0.12	+0.9
2,185,889	+		MPMX19_02088	0.12	-0.4
2,185,889	+		MPMX19_02088	0.12	-0.5
2,185,889	+		MPMX19_02088	0.12	-0.1
2,185,889	+		MPMX19_02088	0.12	+0.4
2,185,937	+		MPMX19_02088	0.14	+0.9
2,185,937	+		MPMX19_02088	0.14	-0.6
2,186,186	+		MPMX19_02088	0.26	+0.2
2,186,186	+		MPMX19_02088	0.26	+1.6
2,186,186	+		MPMX19_02088	0.26	-1.1
2,186,186	+		MPMX19_02088	0.26	+1.3
2,186,186	+		MPMX19_02088	0.26	+0.2
2,186,186	+		MPMX19_02088	0.26	-0.3
2,186,186	+		MPMX19_02088	0.26	-1.0
2,186,186	+		MPMX19_02088	0.26	+0.0
2,186,240	+		MPMX19_02088	0.29	-1.4
2,186,240	+		MPMX19_02088	0.29	+0.8
2,186,240	+		MPMX19_02088	0.29	-1.6
2,186,240	+		MPMX19_02088	0.29	-0.6
2,186,240	+		MPMX19_02088	0.29	-0.5
2,186,240	+		MPMX19_02088	0.29	-1.9
2,186,240	+		MPMX19_02088	0.29	+0.1
2,186,240	+		MPMX19_02088	0.29	+1.4
2,186,240	+		MPMX19_02088	0.29	-0.4
2,186,240	+		MPMX19_02088	0.29	-0.3
2,186,334	+		MPMX19_02088	0.34	+0.5
2,186,334	+		MPMX19_02088	0.34	-1.0
2,186,334	+		MPMX19_02088	0.34	-0.8
2,186,334	+		MPMX19_02088	0.34	+1.9
2,186,334	+		MPMX19_02088	0.34	-0.3
2,186,336	+		MPMX19_02088	0.34	+0.3
2,186,336	+		MPMX19_02088	0.34	+0.9
2,186,336	+		MPMX19_02088	0.34	-0.5
2,186,336	+		MPMX19_02088	0.34	-2.1
2,186,336	+		MPMX19_02088	0.34	+0.9
2,186,615	+		MPMX19_02088	0.47	+0.6
2,186,615	+		MPMX19_02088	0.47	+0.3
2,186,615	+		MPMX19_02088	0.47	+1.0
2,186,615	+		MPMX19_02088	0.47	+1.9
2,186,616	-		MPMX19_02088	0.48	-0.7
2,186,616	-		MPMX19_02088	0.48	-1.1
2,186,616	-		MPMX19_02088	0.48	-0.1
2,186,616	-		MPMX19_02088	0.48	+0.0
2,186,652	+		MPMX19_02088	0.49	+0.9
2,186,732	+		MPMX19_02088	0.53	-0.1
2,186,732	+		MPMX19_02088	0.53	+0.3
2,186,732	+		MPMX19_02088	0.53	-0.1
2,186,733	-		MPMX19_02088	0.53	-0.1
2,186,733	-		MPMX19_02088	0.53	-1.3
2,186,848	+		MPMX19_02088	0.59	-0.5
2,186,894	+		MPMX19_02088	0.61	+0.2
2,186,966	+		MPMX19_02088	0.65	+0.3
2,186,966	+		MPMX19_02088	0.65	+0.8
2,186,966	+		MPMX19_02088	0.65	+0.0
2,186,966	+		MPMX19_02088	0.65	+0.2
2,186,966	+		MPMX19_02088	0.65	+2.4
2,186,967	-		MPMX19_02088	0.65	+1.9
2,187,011	+		MPMX19_02088	0.67	+0.2
2,187,011	+		MPMX19_02088	0.67	+0.4
2,187,012	-		MPMX19_02088	0.67	-1.0
2,187,179	+		MPMX19_02088	0.75	-0.7
2,187,179	+		MPMX19_02088	0.75	+0.9
2,187,179	+		MPMX19_02088	0.75	+0.1
2,187,179	+		MPMX19_02088	0.75	+0.6
2,187,179	+		MPMX19_02088	0.75	+0.0
2,187,179	+		MPMX19_02088	0.75	+0.3
2,187,179	+		MPMX19_02088	0.75	-1.0
2,187,179	+		MPMX19_02088	0.75	+0.4
2,187,179	+		MPMX19_02088	0.75	+0.5
2,187,179	+		MPMX19_02088	0.75	-0.9
2,187,179	+		MPMX19_02088	0.75	-0.1
2,187,179	+		MPMX19_02088	0.75	-1.7
2,187,179	+		MPMX19_02088	0.75	+0.0
2,187,179	+		MPMX19_02088	0.75	-1.6
2,187,179	+		MPMX19_02088	0.75	-1.5
2,187,179	+		MPMX19_02088	0.75	+1.3
2,187,179	+		MPMX19_02088	0.75	-0.3
2,187,179	+		MPMX19_02088	0.75	-0.8
2,187,179	+		MPMX19_02088	0.75	+0.5
2,187,179	+		MPMX19_02088	0.75	+1.4
2,187,179	+		MPMX19_02088	0.75	+0.5
2,187,179	+		MPMX19_02088	0.75	-0.1
2,187,179	+		MPMX19_02088	0.75	-0.8
2,187,179	+		MPMX19_02088	0.75	-0.8
2,187,179	+		MPMX19_02088	0.75	-0.5
2,187,180	-		MPMX19_02088	0.75	-0.1
2,187,180	-		MPMX19_02088	0.75	-1.8
2,187,180	-		MPMX19_02088	0.75	-0.4
2,187,180	-		MPMX19_02088	0.75	-0.1
2,187,180	-		MPMX19_02088	0.75	-2.0
2,187,180	-		MPMX19_02088	0.75	-0.5
2,187,180	-		MPMX19_02088	0.75	-0.3
2,187,311	+		MPMX19_02088	0.82	-0.3
2,187,513	+				+0.3
2,187,534	-				+0.0
2,187,602	+				-0.5
2,187,602	+				+0.5
2,187,603	-				-0.9
2,187,606	+				-0.1
2,187,606	+				+0.3
2,187,606	+				-2.1
2,187,606	+				+0.7
2,187,606	+				+0.9
2,187,606	+				-2.1
2,187,606	+				+1.0
2,187,606	+				-1.1
2,187,606	+				+1.4
2,187,606	+				-0.1
2,187,607	-				-0.1
2,187,607	-				+0.6
2,187,607	-				-3.1
2,187,607	-				+0.5
2,187,607	-				-2.5
2,187,607	-				+1.2
2,187,635	+				+0.3
2,187,635	+				-0.7
2,187,635	+				-0.1
2,187,635	+				+0.7
2,187,731	+				-0.8
2,187,731	+				+0.0
2,187,731	+				+0.9
2,187,731	+				-1.1
2,187,731	+				-0.8
2,187,731	+				+0.9
2,187,731	+				-0.7
2,187,731	+				-1.3
2,187,731	+				-0.0
2,187,731	+				-0.7
2,188,316	+		MPMX19_02089	0.75	-0.2
2,188,317	-		MPMX19_02089	0.75	-1.1
2,188,376	+		MPMX19_02089	0.82	-1.7
2,188,376	+		MPMX19_02089	0.82	+0.1
2,188,376	+		MPMX19_02089	0.82	-1.0
2,188,376	+		MPMX19_02089	0.82	-0.7
2,188,376	+		MPMX19_02089	0.82	-0.4
2,188,376	+		MPMX19_02089	0.82	-0.2
2,188,376	+		MPMX19_02089	0.82	-2.7
2,188,376	+		MPMX19_02089	0.82	+0.5
2,188,377	-		MPMX19_02089	0.82	+0.3
2,188,377	-		MPMX19_02089	0.82	+0.3
2,188,377	-		MPMX19_02089	0.82	-0.7
2,188,377	-		MPMX19_02089	0.82	+0.3
2,188,377	-		MPMX19_02089	0.82	-0.5