Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02079

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,175,134	+		MPMX19_02077	0.63	+0.3
2,175,134	+		MPMX19_02077	0.63	-0.2
2,175,134	+		MPMX19_02077	0.63	+0.8
2,175,134	+		MPMX19_02077	0.63	-1.3
2,175,134	+		MPMX19_02077	0.63	-0.5
2,175,134	+		MPMX19_02077	0.63	+0.0
2,175,134	+		MPMX19_02077	0.63	+0.1
2,175,134	+		MPMX19_02077	0.63	-2.0
2,175,134	+		MPMX19_02077	0.63	-0.2
2,175,134	+		MPMX19_02077	0.63	-0.1
2,175,134	+		MPMX19_02077	0.63	-0.9
2,175,134	+		MPMX19_02077	0.63	-0.2
2,175,134	+		MPMX19_02077	0.63	+1.6
2,175,134	+		MPMX19_02077	0.63	-0.9
2,175,134	+		MPMX19_02077	0.63	-0.1
2,175,134	+		MPMX19_02077	0.63	-0.2
2,175,134	+		MPMX19_02077	0.63	-0.7
2,175,134	+		MPMX19_02077	0.63	-0.0
2,175,135	-		MPMX19_02077	0.63	-0.2
2,175,135	-		MPMX19_02077	0.63	+0.3
2,175,135	-		MPMX19_02077	0.63	+0.6
2,175,135	-		MPMX19_02077	0.63	-2.1
2,175,135	-		MPMX19_02077	0.63	+0.6
2,175,135	-		MPMX19_02077	0.63	-0.2
2,175,135	-		MPMX19_02077	0.63	-1.3
2,175,135	-		MPMX19_02077	0.63	-1.0
2,175,135	-		MPMX19_02077	0.63	-0.5
2,175,135	-		MPMX19_02077	0.63	-1.0
2,175,317	+		MPMX19_02077	0.74	-0.1
2,175,317	+		MPMX19_02077	0.74	+0.3
2,175,317	+		MPMX19_02077	0.74	-0.4
2,175,317	+		MPMX19_02077	0.74	-0.9
2,175,317	+		MPMX19_02077	0.74	+0.1
2,175,317	+		MPMX19_02077	0.74	-1.1
2,175,318	-		MPMX19_02077	0.74	-0.1
2,175,318	-		MPMX19_02077	0.74	+1.6
2,175,318	-		MPMX19_02077	0.74	-0.9
2,175,318	-		MPMX19_02077	0.74	-0.3
2,175,464	+		MPMX19_02077	0.83	-0.7
2,175,464	+		MPMX19_02077	0.83	-0.1
2,175,464	+		MPMX19_02077	0.83	-1.3
2,175,464	+		MPMX19_02077	0.83	-1.1
2,175,464	+		MPMX19_02077	0.83	-0.2
2,175,465	-		MPMX19_02077	0.83	-0.4
2,175,465	-		MPMX19_02077	0.83	-1.6
2,175,465	-		MPMX19_02077	0.83	+0.1
2,175,465	-		MPMX19_02077	0.83	-0.6
2,175,620	+				-1.2
2,175,621	-				+0.8
2,175,621	-				-0.5
2,175,621	-				+0.8
2,175,644	+				-0.5
2,175,644	+				-1.9
2,175,644	+				+0.1
2,175,644	+				-0.5
2,175,644	+				-0.7
2,175,644	+				-1.6
2,175,645	-				-0.6
2,175,645	-				-2.7
2,175,645	-				-2.1
2,175,645	-				+1.1
2,175,645	-				-0.7
2,175,645	-				+0.7
2,175,645	-				+0.6
2,175,827	+		MPMX19_02078	0.24	+0.8
2,175,827	+		MPMX19_02078	0.24	+0.3
2,175,827	+		MPMX19_02078	0.24	+0.3
2,175,827	+		MPMX19_02078	0.24	-1.2
2,175,827	+		MPMX19_02078	0.24	-0.4
2,175,827	+		MPMX19_02078	0.24	+0.3
2,175,828	-		MPMX19_02078	0.25	-0.7
2,175,828	-		MPMX19_02078	0.25	+0.8
2,175,828	-		MPMX19_02078	0.25	-0.7
2,175,828	-		MPMX19_02078	0.25	-1.1
2,175,828	-		MPMX19_02078	0.25	+0.6
2,175,828	-		MPMX19_02078	0.25	-0.3
2,175,828	-		MPMX19_02078	0.25	-0.1
2,175,974	+				-0.4
2,175,974	+				+0.2
2,175,974	+				-1.2
2,175,975	-				+0.9
2,175,975	-				-0.5
2,175,975	-				-0.4
2,175,975	-				-0.7
2,175,975	-				-0.2
2,175,975	-				-1.3
2,176,058	+				-2.4
2,176,058	+				+0.0
2,176,058	+				-0.0
2,176,058	+				-1.0
2,176,058	+				+1.0
2,176,058	+				-1.0
2,176,058	+				+1.0
2,176,059	-				-0.7
2,176,059	-				+0.0
2,176,059	-				-0.6
2,176,059	-				-0.4
2,176,059	-				+1.0
2,176,059	-				-1.0
2,176,059	-				+0.3
2,176,059	-				-1.9
2,176,352	+		MPMX19_02079	0.18	+1.3
2,176,353	-		MPMX19_02079	0.18	+0.5
2,176,353	-		MPMX19_02079	0.18	+0.6
2,176,418	+		MPMX19_02079	0.22	-1.3
2,176,439	+		MPMX19_02079	0.24	-0.1
2,176,439	+		MPMX19_02079	0.24	-1.1
2,176,440	-		MPMX19_02079	0.24	+0.3
2,176,475	+		MPMX19_02079	0.26	-1.1
2,176,475	+		MPMX19_02079	0.26	-0.3
2,176,475	+		MPMX19_02079	0.26	-0.5
2,176,475	+		MPMX19_02079	0.26	+1.9
2,176,476	-		MPMX19_02079	0.26	+0.7
2,176,476	-		MPMX19_02079	0.26	+0.0
2,176,476	-		MPMX19_02079	0.26	+0.8
2,176,476	-		MPMX19_02079	0.26	+1.0
2,176,476	-		MPMX19_02079	0.26	-0.0
2,176,476	-		MPMX19_02079	0.26	+0.3
2,176,526	+		MPMX19_02079	0.30	+1.2
2,176,526	+		MPMX19_02079	0.30	-0.5
2,176,526	+		MPMX19_02079	0.30	-1.1
2,176,526	+		MPMX19_02079	0.30	+0.3
2,176,526	+		MPMX19_02079	0.30	+0.2
2,176,526	+		MPMX19_02079	0.30	-1.0
2,176,526	+		MPMX19_02079	0.30	+0.7
2,176,526	+		MPMX19_02079	0.30	+0.0
2,176,526	+		MPMX19_02079	0.30	+0.0
2,176,527	-		MPMX19_02079	0.30	-0.7
2,176,527	-		MPMX19_02079	0.30	-1.2
2,176,527	-		MPMX19_02079	0.30	-0.2
2,176,527	-		MPMX19_02079	0.30	-2.1
2,176,527	-		MPMX19_02079	0.30	-0.7
2,176,527	-		MPMX19_02079	0.30	-2.1
2,176,527	-		MPMX19_02079	0.30	+0.5
2,176,760	+		MPMX19_02079	0.46	+2.0
2,176,760	+		MPMX19_02079	0.46	+0.1
2,176,760	+		MPMX19_02079	0.46	+0.2
2,176,760	+		MPMX19_02079	0.46	+0.6
2,176,760	+		MPMX19_02079	0.46	+0.0
2,176,760	+		MPMX19_02079	0.46	-0.7
2,176,760	+		MPMX19_02079	0.46	+0.3
2,176,760	+		MPMX19_02079	0.46	-0.1
2,176,760	+		MPMX19_02079	0.46	+0.3
2,176,760	+		MPMX19_02079	0.46	-1.8
2,176,760	+		MPMX19_02079	0.46	-1.0
2,176,761	-		MPMX19_02079	0.46	+1.4
2,176,761	-		MPMX19_02079	0.46	-0.1
2,176,761	-		MPMX19_02079	0.46	-1.8
2,176,761	-		MPMX19_02079	0.46	+1.0
2,176,761	-		MPMX19_02079	0.46	-0.5
2,176,761	-		MPMX19_02079	0.46	-0.3
2,176,761	-		MPMX19_02079	0.46	-0.5
2,176,761	-		MPMX19_02079	0.46	+1.3
2,176,761	-		MPMX19_02079	0.46	+0.0
2,176,761	-		MPMX19_02079	0.46	-0.2
2,176,761	-		MPMX19_02079	0.46	-1.0
2,176,761	-		MPMX19_02079	0.46	-0.5
2,177,039	+		MPMX19_02079	0.66	+0.5
2,177,039	+		MPMX19_02079	0.66	-0.7
2,177,039	+		MPMX19_02079	0.66	-0.7
2,177,039	+		MPMX19_02079	0.66	-1.2
2,177,040	-		MPMX19_02079	0.66	+0.1
2,177,040	-		MPMX19_02079	0.66	-0.1
2,177,040	-		MPMX19_02079	0.66	-0.0
2,177,040	-		MPMX19_02079	0.66	+0.3
2,177,040	-		MPMX19_02079	0.66	-0.5
2,177,040	-		MPMX19_02079	0.66	-1.3
2,177,040	-		MPMX19_02079	0.66	+1.0
2,177,040	-		MPMX19_02079	0.66	-1.7
2,177,040	-		MPMX19_02079	0.66	-0.5
2,177,186	+		MPMX19_02079	0.76	+0.1
2,177,186	+		MPMX19_02079	0.76	-2.4
2,177,186	+		MPMX19_02079	0.76	-0.2
2,177,186	+		MPMX19_02079	0.76	+0.3
2,177,187	-		MPMX19_02079	0.77	-0.8
2,177,187	-		MPMX19_02079	0.77	-0.2
2,177,187	-		MPMX19_02079	0.77	-0.1
2,177,187	-		MPMX19_02079	0.77	-0.1
2,177,187	-		MPMX19_02079	0.77	+0.3
2,177,187	-		MPMX19_02079	0.77	-1.5
2,177,187	-		MPMX19_02079	0.77	-1.1
2,177,345	+		MPMX19_02079	0.88	+0.2
2,177,345	+		MPMX19_02079	0.88	-1.4
2,177,345	+		MPMX19_02079	0.88	-0.3
2,177,345	+		MPMX19_02079	0.88	-1.3
2,177,345	+		MPMX19_02079	0.88	+0.9
2,177,345	+		MPMX19_02079	0.88	-0.7
2,177,345	+		MPMX19_02079	0.88	-0.1
2,177,345	+		MPMX19_02079	0.88	+0.6
2,177,345	+		MPMX19_02079	0.88	+0.9
2,177,345	+		MPMX19_02079	0.88	+0.0
2,177,345	+		MPMX19_02079	0.88	+0.5
2,177,345	+		MPMX19_02079	0.88	+0.2
2,177,345	+		MPMX19_02079	0.88	-0.3
2,177,345	+		MPMX19_02079	0.88	+0.5
2,177,345	+		MPMX19_02079	0.88	+0.0
2,177,345	+		MPMX19_02079	0.88	-1.8
2,177,346	-		MPMX19_02079	0.88	-0.5
2,177,346	-		MPMX19_02079	0.88	+0.9
2,177,346	-		MPMX19_02079	0.88	-1.8
2,177,346	-		MPMX19_02079	0.88	+1.4
2,177,346	-		MPMX19_02079	0.88	+0.3
2,177,346	-		MPMX19_02079	0.88	-0.2
2,177,346	-		MPMX19_02079	0.88	+0.3
2,177,346	-		MPMX19_02079	0.88	-0.3
2,177,346	-		MPMX19_02079	0.88	-0.5
2,177,346	-		MPMX19_02079	0.88	+0.6
2,177,346	-		MPMX19_02079	0.88	-0.7
2,177,346	-		MPMX19_02079	0.88	-0.1
2,177,346	-		MPMX19_02079	0.88	-0.8
2,177,483	+				-0.7
2,177,483	+				-0.6
2,177,483	+				+0.0
2,177,483	+				+0.6
2,177,483	+				-0.7
2,177,483	+				+0.3
2,177,483	+				-1.0
2,177,483	+				-0.8
2,177,483	+				-0.0
2,177,483	+				-1.6
2,177,483	+				+0.7
2,177,483	+				-1.6
2,177,483	+				-1.3
2,177,483	+				+0.1
2,177,483	+				-0.8
2,177,483	+				-0.7
2,177,483	+				+0.3
2,177,483	+				-0.3
2,177,483	+				-0.5
2,177,484	-				-2.2
2,177,484	-				-0.8
2,177,484	-				+0.3
2,177,484	-				+0.0
2,177,484	-				-1.8
2,177,484	-				-0.1
2,177,484	-				+0.6
2,177,484	-				+0.6
2,177,484	-				-0.5
2,177,484	-				+1.2
2,177,484	-				+2.2
2,177,484	-				-1.5
2,177,484	-				+2.5
2,177,484	-				+0.4
2,177,484	-				-1.2
2,177,484	-				+0.9
2,177,807	+		MPMX19_02080	0.49	+0.0
2,177,807	+		MPMX19_02080	0.49	-1.0
2,177,807	+		MPMX19_02080	0.49	-2.9
2,177,807	+		MPMX19_02080	0.49	-0.5
2,177,808	-		MPMX19_02080	0.49	-0.5
2,177,808	-		MPMX19_02080	0.49	+1.2
2,177,808	-		MPMX19_02080	0.49	-1.8
2,177,903	+		MPMX19_02080	0.71	+0.5
2,177,903	+		MPMX19_02080	0.71	-0.6
2,177,903	+		MPMX19_02080	0.71	-0.1
2,177,903	+		MPMX19_02080	0.71	-0.5
2,177,904	-		MPMX19_02080	0.71	+1.0
2,177,904	-		MPMX19_02080	0.71	-0.6
2,177,904	-		MPMX19_02080	0.71	-0.8
2,177,904	-		MPMX19_02080	0.71	+0.0
2,177,918	+		MPMX19_02080	0.74	+0.5
2,177,918	+		MPMX19_02080	0.74	-1.0
2,177,919	-		MPMX19_02080	0.74	+0.1
2,177,919	-		MPMX19_02080	0.74	-1.3
2,177,919	-		MPMX19_02080	0.74	-1.7
2,177,919	-		MPMX19_02080	0.74	+0.1
2,177,919	-		MPMX19_02080	0.74	-0.5
2,178,130	+				-0.4
2,178,131	-				-0.1