Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02054

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,149,948	+		MPMX19_02053	0.12	+1.6
2,149,948	+		MPMX19_02053	0.12	+0.3
2,149,948	+		MPMX19_02053	0.12	-0.2
2,149,948	+		MPMX19_02053	0.12	-0.2
2,149,948	+		MPMX19_02053	0.12	-0.3
2,149,948	+		MPMX19_02053	0.12	-0.3
2,149,948	+		MPMX19_02053	0.12	-0.0
2,149,948	+		MPMX19_02053	0.12	+0.8
2,149,948	+		MPMX19_02053	0.12	-1.6
2,149,948	+		MPMX19_02053	0.12	-0.9
2,149,948	+		MPMX19_02053	0.12	+0.3
2,149,948	+		MPMX19_02053	0.12	-1.0
2,149,948	+		MPMX19_02053	0.12	-1.1
2,149,948	+		MPMX19_02053	0.12	-1.1
2,149,948	+		MPMX19_02053	0.12	-0.7
2,149,948	+		MPMX19_02053	0.12	+0.2
2,149,948	+		MPMX19_02053	0.12	+1.8
2,149,948	+		MPMX19_02053	0.12	-0.2
2,149,948	+		MPMX19_02053	0.12	-0.2
2,149,948	+		MPMX19_02053	0.12	+1.1
2,149,949	-		MPMX19_02053	0.12	-0.5
2,149,949	-		MPMX19_02053	0.12	-0.6
2,149,949	-		MPMX19_02053	0.12	+1.0
2,149,949	-		MPMX19_02053	0.12	-1.6
2,149,949	-		MPMX19_02053	0.12	+0.3
2,149,949	-		MPMX19_02053	0.12	+0.7
2,149,949	-		MPMX19_02053	0.12	+0.7
2,149,949	-		MPMX19_02053	0.12	+2.0
2,149,949	-		MPMX19_02053	0.12	+0.3
2,149,949	-		MPMX19_02053	0.12	+0.3
2,149,949	-		MPMX19_02053	0.12	-1.2
2,149,949	-		MPMX19_02053	0.12	+0.8
2,149,949	-		MPMX19_02053	0.12	-0.2
2,149,949	-		MPMX19_02053	0.12	-1.8
2,149,949	-		MPMX19_02053	0.12	-0.1
2,149,949	-		MPMX19_02053	0.12	-0.4
2,149,949	-		MPMX19_02053	0.12	+0.1
2,150,032	+		MPMX19_02053	0.25	+0.7
2,150,032	+		MPMX19_02053	0.25	-0.7
2,150,032	+		MPMX19_02053	0.25	+0.8
2,150,033	-		MPMX19_02053	0.25	+0.7
2,150,033	-		MPMX19_02053	0.25	-0.5
2,150,083	+		MPMX19_02053	0.33	+0.4
2,150,083	+		MPMX19_02053	0.33	+0.0
2,150,083	+		MPMX19_02053	0.33	+0.1
2,150,083	+		MPMX19_02053	0.33	-1.0
2,150,083	+		MPMX19_02053	0.33	+0.1
2,150,083	+		MPMX19_02053	0.33	+0.5
2,150,083	+		MPMX19_02053	0.33	-0.1
2,150,083	+		MPMX19_02053	0.33	-0.7
2,150,083	+		MPMX19_02053	0.33	-2.7
2,150,083	+		MPMX19_02053	0.33	+0.3
2,150,083	+		MPMX19_02053	0.33	-1.5
2,150,083	+		MPMX19_02053	0.33	-0.3
2,150,084	-		MPMX19_02053	0.33	-0.0
2,150,084	-		MPMX19_02053	0.33	-0.0
2,150,084	-		MPMX19_02053	0.33	-0.1
2,150,084	-		MPMX19_02053	0.33	+0.1
2,150,084	-		MPMX19_02053	0.33	+0.6
2,150,084	-		MPMX19_02053	0.33	-0.9
2,150,084	-		MPMX19_02053	0.33	+0.7
2,150,084	-		MPMX19_02053	0.33	-0.4
2,150,305	+		MPMX19_02053	0.68	-0.8
2,150,305	+		MPMX19_02053	0.68	+0.3
2,150,305	+		MPMX19_02053	0.68	-0.3
2,150,305	+		MPMX19_02053	0.68	-1.2
2,150,305	+		MPMX19_02053	0.68	-1.0
2,150,305	+		MPMX19_02053	0.68	+0.9
2,150,305	+		MPMX19_02053	0.68	-1.3
2,150,306	-		MPMX19_02053	0.68	-0.7
2,150,471	-				-0.1
2,150,471	-				-0.3
2,150,637	+				-0.1
2,150,637	+				+2.8
2,150,637	+				+0.0
2,150,637	+				-1.5
2,150,638	-				-2.3
2,150,638	-				-1.0
2,150,638	-				+0.8
2,150,638	-				-1.9
2,150,638	-				-1.0
2,150,824	+		MPMX19_02054	0.25	-1.6
2,150,825	-		MPMX19_02054	0.25	+1.3
2,150,825	-		MPMX19_02054	0.25	-2.4
2,150,980	+		MPMX19_02054	0.48	+0.3
2,150,980	+		MPMX19_02054	0.48	-1.2
2,150,980	+		MPMX19_02054	0.48	+0.2
2,150,980	+		MPMX19_02054	0.48	+0.4
2,150,980	+		MPMX19_02054	0.48	-2.8
2,150,980	+		MPMX19_02054	0.48	-0.2
2,150,980	+		MPMX19_02054	0.48	-1.7
2,150,980	+		MPMX19_02054	0.48	-1.5
2,150,981	-		MPMX19_02054	0.48	+0.0
2,150,981	-		MPMX19_02054	0.48	-1.3
2,150,981	-		MPMX19_02054	0.48	-1.0
2,151,265	+				-0.2
2,151,265	+				-0.5
2,151,265	+				-0.8
2,151,266	-				-1.7
2,151,266	-				-0.6
2,151,316	+				-2.0
2,151,316	+				-0.7
2,151,317	-				-0.2
2,151,317	-				-1.2
2,151,317	-				+0.5
2,151,317	-				+0.8
2,151,317	-				-0.8
2,151,323	+				-0.5
2,151,324	-				+0.8
2,151,324	-				+0.2
2,151,324	-				+0.9
2,151,324	-				+0.5
2,151,381	+				-2.1
2,151,381	+				-0.6
2,151,382	-				+0.0
2,151,382	-				-0.5
2,151,382	-				-1.2
2,151,482	-				-1.6
2,151,672	+		MPMX19_02055	0.53	+0.1
2,151,672	+		MPMX19_02055	0.53	-0.7
2,151,678	+		MPMX19_02055	0.54	+0.5
2,151,678	+		MPMX19_02055	0.54	-0.8
2,151,678	+		MPMX19_02055	0.54	-0.3
2,151,678	+		MPMX19_02055	0.54	+0.1
2,151,678	+		MPMX19_02055	0.54	-0.8
2,151,678	+		MPMX19_02055	0.54	-2.3
2,151,679	-		MPMX19_02055	0.55	-0.7
2,151,679	-		MPMX19_02055	0.55	-0.6
2,151,957	-		MPMX19_02056	0.18	-1.0