Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02031

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,124,457	+		MPMX19_02029	0.90	+0.5
2,124,457	+		MPMX19_02029	0.90	-2.2
2,124,457	+		MPMX19_02029	0.90	+2.8
2,124,458	-				+1.2
2,124,458	-				-0.8
2,124,469	+				-1.8
2,124,469	+				-0.5
2,124,469	+				-0.3
2,124,469	+				+0.2
2,124,469	+				-0.2
2,124,469	+				+0.0
2,124,470	-				+0.1
2,124,470	-				-3.1
2,124,470	-				+1.6
2,124,470	-				+1.0
2,124,470	-				+0.6
2,124,470	-				-1.2
2,124,470	-				-0.1
2,124,470	-				-0.3
2,124,596	+				-1.2
2,124,597	-				-0.9
2,124,597	-				-1.6
2,124,734	+		MPMX19_02030	0.19	+0.2
2,124,734	+		MPMX19_02030	0.19	-1.0
2,124,734	+		MPMX19_02030	0.19	+0.6
2,124,734	+		MPMX19_02030	0.19	+0.7
2,124,734	+		MPMX19_02030	0.19	-1.3
2,124,734	+		MPMX19_02030	0.19	-0.2
2,124,735	-		MPMX19_02030	0.19	-1.0
2,124,735	-		MPMX19_02030	0.19	+0.1
2,124,735	-		MPMX19_02030	0.19	-1.3
2,124,839	+		MPMX19_02030	0.33	+0.6
2,124,839	+		MPMX19_02030	0.33	-0.6
2,124,839	+		MPMX19_02030	0.33	-0.3
2,124,839	+		MPMX19_02030	0.33	-1.6
2,124,839	+		MPMX19_02030	0.33	-0.2
2,124,839	+		MPMX19_02030	0.33	-1.1
2,124,839	+		MPMX19_02030	0.33	-0.5
2,124,839	+		MPMX19_02030	0.33	-0.5
2,124,839	+		MPMX19_02030	0.33	+0.0
2,124,839	+		MPMX19_02030	0.33	-1.1
2,124,839	+		MPMX19_02030	0.33	+0.3
2,124,839	+		MPMX19_02030	0.33	-0.6
2,124,839	+		MPMX19_02030	0.33	+0.1
2,124,840	-		MPMX19_02030	0.33	+0.2
2,124,840	-		MPMX19_02030	0.33	+1.8
2,124,840	-		MPMX19_02030	0.33	+0.4
2,124,840	-		MPMX19_02030	0.33	-0.8
2,124,840	-		MPMX19_02030	0.33	-2.1
2,124,840	-		MPMX19_02030	0.33	-1.7
2,124,840	-		MPMX19_02030	0.33	+0.2
2,124,840	-		MPMX19_02030	0.33	-0.8
2,124,840	-		MPMX19_02030	0.33	-0.2
2,124,840	-		MPMX19_02030	0.33	+0.6
2,124,840	-		MPMX19_02030	0.33	+0.2
2,124,840	-		MPMX19_02030	0.33	+0.0
2,124,840	-		MPMX19_02030	0.33	-0.5
2,124,840	-		MPMX19_02030	0.33	+0.2
2,124,840	-		MPMX19_02030	0.33	-1.1
2,124,840	-		MPMX19_02030	0.33	+0.8
2,124,840	-		MPMX19_02030	0.33	+0.0
2,124,860	+		MPMX19_02030	0.36	+0.5
2,124,860	+		MPMX19_02030	0.36	-0.3
2,124,860	+		MPMX19_02030	0.36	-1.3
2,124,860	+		MPMX19_02030	0.36	+0.1
2,124,860	+		MPMX19_02030	0.36	-1.9
2,124,860	+		MPMX19_02030	0.36	-1.2
2,124,861	-		MPMX19_02030	0.36	-1.0
2,124,861	-		MPMX19_02030	0.36	+0.7
2,124,861	-		MPMX19_02030	0.36	-0.5
2,124,861	-		MPMX19_02030	0.36	-0.2
2,125,199	+		MPMX19_02030	0.83	-0.8
2,125,200	-		MPMX19_02030	0.83	-2.1
2,125,319	+				+0.2
2,125,319	+				-0.6
2,125,319	+				-0.1
2,125,319	+				-0.4
2,125,319	+				-0.7
2,125,319	+				-1.4
2,125,319	+				-0.2
2,125,320	-				-0.0
2,125,320	-				+0.2
2,125,320	-				+1.3
2,125,320	-				-2.1
2,125,320	-				-0.4
2,125,320	-				-0.3
2,125,337	+				+0.4
2,125,337	+				+0.4
2,125,337	+				+0.4
2,125,338	-				+0.7
2,125,338	-				-0.1
2,125,338	-				-1.7
2,125,339	+				-1.2
2,125,339	+				-0.7
2,125,339	+				-1.2
2,125,339	+				-0.8
2,125,339	+				-1.7
2,125,340	-				-1.0
2,125,340	-				+0.6
2,125,345	+				-0.8
2,125,345	+				-0.6
2,125,345	+				-0.6
2,125,345	+				-0.3
2,125,346	-				-1.1
2,125,346	-				-1.0
2,125,346	-				+0.2
2,125,346	-				-0.3
2,125,346	-				-1.1
2,125,357	-				-1.3
2,125,440	+				+0.4
2,125,440	+				-0.2
2,125,440	+				-0.9
2,125,440	+				-0.9
2,125,458	+				+0.1
2,125,888	-		MPMX19_02031	0.55	-2.5
2,125,888	-		MPMX19_02031	0.55	-1.6
2,125,888	-		MPMX19_02031	0.55	+0.5
2,125,888	-		MPMX19_02031	0.55	-0.0
2,125,942	+		MPMX19_02031	0.62	-1.0
2,125,943	-		MPMX19_02031	0.63	-0.8
2,126,286	+				-1.8
2,126,286	+				+0.4
2,126,286	+				+0.2
2,126,287	-				-0.3
2,126,287	-				+0.0
2,126,287	-				-2.1
2,126,287	-				-0.3