Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01973

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,054,951	+		MPMX19_01972	0.46	-0.7
2,054,952	-		MPMX19_01972	0.46	-0.1
2,055,017	+		MPMX19_01972	0.50	-0.3
2,055,017	+		MPMX19_01972	0.50	-0.9
2,055,017	+		MPMX19_01972	0.50	-1.7
2,055,017	+		MPMX19_01972	0.50	-0.1
2,055,017	+		MPMX19_01972	0.50	-1.2
2,055,017	+		MPMX19_01972	0.50	-0.2
2,055,018	-		MPMX19_01972	0.50	+0.1
2,055,018	-		MPMX19_01972	0.50	+0.9
2,055,018	-		MPMX19_01972	0.50	-0.8
2,055,018	-		MPMX19_01972	0.50	-1.2
2,055,018	-		MPMX19_01972	0.50	-0.5
2,055,018	-		MPMX19_01972	0.50	-0.0
2,055,275	+		MPMX19_01972	0.68	-0.8
2,055,275	+		MPMX19_01972	0.68	-1.5
2,055,275	+		MPMX19_01972	0.68	+0.5
2,055,275	+		MPMX19_01972	0.68	+0.2
2,055,275	+		MPMX19_01972	0.68	-0.1
2,055,275	+		MPMX19_01972	0.68	+0.1
2,055,275	+		MPMX19_01972	0.68	-0.1
2,055,275	+		MPMX19_01972	0.68	-1.3
2,055,275	+		MPMX19_01972	0.68	-0.2
2,055,275	+		MPMX19_01972	0.68	-1.7
2,055,275	+		MPMX19_01972	0.68	-0.8
2,055,275	+		MPMX19_01972	0.68	-0.5
2,055,276	-		MPMX19_01972	0.68	+1.2
2,055,276	-		MPMX19_01972	0.68	+1.6
2,055,276	-		MPMX19_01972	0.68	-0.4
2,055,276	-		MPMX19_01972	0.68	-0.0
2,055,276	-		MPMX19_01972	0.68	+0.4
2,055,276	-		MPMX19_01972	0.68	-0.5
2,055,276	-		MPMX19_01972	0.68	+1.1
2,055,276	-		MPMX19_01972	0.68	+0.5
2,055,276	-		MPMX19_01972	0.68	-0.6
2,055,506	+		MPMX19_01972	0.84	+0.8
2,055,506	+		MPMX19_01972	0.84	-0.4
2,055,506	+		MPMX19_01972	0.84	-1.4
2,055,506	+		MPMX19_01972	0.84	-1.4
2,055,506	+		MPMX19_01972	0.84	-1.3
2,055,507	-		MPMX19_01972	0.84	-0.4
2,055,507	-		MPMX19_01972	0.84	+0.5
2,055,507	-		MPMX19_01972	0.84	+0.8
2,055,507	-		MPMX19_01972	0.84	+0.8
2,055,592	+				-1.9
2,055,592	+				-0.1
2,055,592	+				+0.1
2,055,592	+				-1.2
2,055,592	+				-1.4
2,055,592	+				-1.2
2,055,592	+				-0.8
2,055,593	-				-1.4
2,055,593	-				-0.5
2,055,593	-				+0.1
2,055,593	-				-1.8
2,055,593	-				+0.1
2,055,833	-				-0.7
2,056,638	-		MPMX19_01973	0.66	-0.1
2,057,097	+				+0.5
2,057,097	+				+1.5
2,057,097	+				-1.5
2,057,166	+				-0.4
2,057,166	+				+0.4
2,057,166	+				+0.3
2,057,167	-				-1.0
2,057,167	-				-0.1
2,057,167	-				+0.4
2,057,167	-				-0.9
2,057,167	-				-1.2
2,057,225	+				+0.5
2,057,225	+				-1.3
2,057,225	+				+0.0
2,057,225	+				-0.3
2,057,226	-				-1.2
2,057,226	-				-0.0
2,057,226	-				+0.4
2,057,226	-				+0.8
2,057,226	-				-0.2
2,057,226	-				-1.5
2,057,226	-				-1.2
2,057,411	+		MPMX19_01974	0.12	-0.0
2,057,411	+		MPMX19_01974	0.12	-1.0
2,057,411	+		MPMX19_01974	0.12	-0.3
2,057,411	+		MPMX19_01974	0.12	-0.2
2,057,411	+		MPMX19_01974	0.12	-0.7
2,057,411	+		MPMX19_01974	0.12	-1.0
2,057,412	-		MPMX19_01974	0.13	-2.4
2,057,412	-		MPMX19_01974	0.13	-0.5
2,057,804	-		MPMX19_01974	0.40	+0.8
2,057,884	+		MPMX19_01974	0.45	-0.2
2,057,884	+		MPMX19_01974	0.45	+0.2
2,057,884	+		MPMX19_01974	0.45	-1.3
2,057,884	+		MPMX19_01974	0.45	-0.5
2,057,884	+		MPMX19_01974	0.45	+0.3
2,057,884	+		MPMX19_01974	0.45	-1.1
2,057,884	+		MPMX19_01974	0.45	+0.3
2,057,884	+		MPMX19_01974	0.45	+1.3
2,057,884	+		MPMX19_01974	0.45	-0.8
2,057,884	+		MPMX19_01974	0.45	-0.5
2,057,884	+		MPMX19_01974	0.45	-1.4
2,057,884	+		MPMX19_01974	0.45	+0.3
2,057,884	+		MPMX19_01974	0.45	-0.4
2,057,884	+		MPMX19_01974	0.45	+0.8
2,057,884	+		MPMX19_01974	0.45	-1.0
2,057,884	+		MPMX19_01974	0.45	-1.9
2,057,884	+		MPMX19_01974	0.45	-0.3
2,057,884	+		MPMX19_01974	0.45	-1.2
2,057,884	+		MPMX19_01974	0.45	-0.8
2,057,884	+		MPMX19_01974	0.45	-0.1
2,057,884	+		MPMX19_01974	0.45	-0.2
2,057,884	+		MPMX19_01974	0.45	-1.2
2,057,884	+		MPMX19_01974	0.45	+1.0
2,057,884	+		MPMX19_01974	0.45	-1.0
2,057,884	+		MPMX19_01974	0.45	-1.5
2,057,885	-		MPMX19_01974	0.46	+0.2
2,057,885	-		MPMX19_01974	0.46	-0.2
2,057,885	-		MPMX19_01974	0.46	-0.5
2,057,885	-		MPMX19_01974	0.46	+0.2
2,057,885	-		MPMX19_01974	0.46	+2.8
2,057,885	-		MPMX19_01974	0.46	-0.4
2,057,885	-		MPMX19_01974	0.46	-0.3
2,057,885	-		MPMX19_01974	0.46	+0.4
2,057,885	-		MPMX19_01974	0.46	+0.5
2,057,885	-		MPMX19_01974	0.46	-0.6
2,057,885	-		MPMX19_01974	0.46	-0.5
2,057,885	-		MPMX19_01974	0.46	-2.5
2,057,885	-		MPMX19_01974	0.46	-1.7
2,057,885	-		MPMX19_01974	0.46	+0.0
2,057,885	-		MPMX19_01974	0.46	-0.2
2,057,885	-		MPMX19_01974	0.46	+0.4
2,057,885	-		MPMX19_01974	0.46	-0.0
2,057,885	-		MPMX19_01974	0.46	-0.3
2,057,885	-		MPMX19_01974	0.46	-0.2
2,057,885	-		MPMX19_01974	0.46	-1.4
2,057,885	-		MPMX19_01974	0.46	-1.2
2,057,885	-		MPMX19_01974	0.46	-0.5
2,057,885	-		MPMX19_01974	0.46	-0.5
2,057,885	-		MPMX19_01974	0.46	-0.8
2,057,885	-		MPMX19_01974	0.46	+0.4
2,057,885	-		MPMX19_01974	0.46	-1.4
2,057,886	+		MPMX19_01974	0.46	+0.5
2,057,886	+		MPMX19_01974	0.46	+0.8
2,057,886	+		MPMX19_01974	0.46	+0.3
2,057,886	+		MPMX19_01974	0.46	-1.2
2,057,886	+		MPMX19_01974	0.46	-0.7
2,057,887	-		MPMX19_01974	0.46	-1.8
2,057,887	-		MPMX19_01974	0.46	+0.1
2,057,887	-		MPMX19_01974	0.46	-0.5
2,057,887	-		MPMX19_01974	0.46	-0.3
2,057,887	-		MPMX19_01974	0.46	+0.8
2,057,887	-		MPMX19_01974	0.46	-0.3
2,057,887	-		MPMX19_01974	0.46	-1.3
2,057,887	-		MPMX19_01974	0.46	-0.8
2,057,887	-		MPMX19_01974	0.46	-0.4
2,057,887	-		MPMX19_01974	0.46	+0.1
2,057,887	-		MPMX19_01974	0.46	-1.0