Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01871

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,951,521	-				-0.5
1,951,570	+				-2.6
1,951,570	+				+0.6
1,951,570	+				-0.7
1,951,578	+				-0.9
1,951,578	+				+0.3
1,951,579	-				-1.7
1,951,592	+				-1.0
1,951,748	+		MPMX19_01870	0.31	-0.2
1,951,748	+		MPMX19_01870	0.31	-2.0
1,951,748	+		MPMX19_01870	0.31	+0.8
1,951,748	+		MPMX19_01870	0.31	-0.2
1,951,748	+		MPMX19_01870	0.31	-0.3
1,951,748	+		MPMX19_01870	0.31	-1.2
1,951,748	+		MPMX19_01870	0.31	-0.7
1,951,748	+		MPMX19_01870	0.31	+0.6
1,951,748	+		MPMX19_01870	0.31	-0.8
1,951,748	+		MPMX19_01870	0.31	-2.1
1,951,749	-		MPMX19_01870	0.32	+0.3
1,951,749	-		MPMX19_01870	0.32	-1.0
1,951,749	-		MPMX19_01870	0.32	-1.0
1,951,749	-		MPMX19_01870	0.32	-0.3
1,951,749	-		MPMX19_01870	0.32	-1.1
1,951,813	+		MPMX19_01870	0.43	-0.1
1,951,814	-		MPMX19_01870	0.43	-0.5
1,952,191	+				-0.5
1,952,191	+				-0.6
1,952,191	+				+0.8
1,952,192	-				+0.9
1,952,192	-				-1.9
1,952,192	-				-0.6
1,952,192	-				-0.3
1,952,192	-				-0.2
1,952,192	-				-1.2
1,952,192	-				-1.1
1,952,241	+				-0.9
1,952,241	+				+1.6
1,952,241	+				-1.2
1,952,242	-				+0.5
1,952,242	-				-0.8
1,952,359	+				-0.2
1,952,359	+				+0.2
1,952,359	+				+1.8
1,952,359	+				+0.5
1,952,359	+				-0.8
1,952,359	+				+1.3
1,952,359	+				-0.8
1,952,359	+				-0.3
1,952,359	+				-1.2
1,952,360	-				-0.2
1,952,360	-				-1.2
1,952,360	-				-0.0
1,952,360	-				-1.5
1,952,360	-				+0.2
1,952,360	-				-1.2
1,952,360	-				-1.2
1,952,373	+				-1.5
1,952,373	+				-2.1
1,952,400	+				+0.6
1,952,400	+				-1.4
1,952,400	+				+0.3
1,952,400	+				+0.7
1,952,400	+				-0.3
1,952,400	+				-0.0
1,952,400	+				-0.9
1,952,400	+				-0.8
1,952,400	+				+0.9
1,952,400	+				-2.0
1,952,400	+				-0.2
1,952,400	+				+1.6
1,952,400	+				-0.4
1,952,400	+				-0.9
1,952,400	+				-0.2
1,952,401	-				-1.4
1,952,401	-				-0.9
1,952,401	-				-1.5
1,952,401	-				+0.8
1,952,401	-				-0.7
1,952,401	-				-0.5
1,952,401	-				+1.8
1,952,401	-				+0.6
1,952,402	+				+0.0
1,952,402	+				-0.7
1,952,402	+				-0.2
1,952,402	+				+2.0
1,952,402	+				-0.3
1,952,402	+				-1.7
1,952,402	+				-1.4
1,952,402	+				+0.3
1,952,402	+				-1.4
1,952,402	+				-0.4
1,952,402	+				-1.4
1,952,402	+				+0.2
1,952,402	+				-0.7
1,952,402	+				-0.4
1,952,402	+				-0.7
1,952,402	+				+0.6
1,952,402	+				-1.8
1,952,402	+				-1.4
1,952,402	+				-0.5
1,952,402	+				+0.3
1,952,402	+				-1.3
1,952,402	+				+0.1
1,952,402	+				+0.3
1,952,402	+				-0.8
1,952,402	+				-1.1
1,952,402	+				-0.2
1,952,402	+				+0.8
1,952,402	+				-0.5
1,952,402	+				-0.9
1,952,402	+				-0.4
1,952,402	+				-1.4
1,952,402	+				+1.0
1,952,402	+				+1.1
1,952,402	+				-0.9
1,952,402	+				+1.3
1,952,402	+				-2.1
1,952,402	+				-1.8
1,952,403	-				-0.0
1,952,403	-				-1.7
1,952,403	-				-0.8
1,952,403	-				-0.4
1,952,403	-				+0.8
1,952,403	-				+0.2
1,952,403	-				-2.2
1,952,403	-				-1.0
1,952,403	-				-0.5
1,952,403	-				-1.8
1,952,403	-				-1.7
1,952,403	-				-0.8
1,952,403	-				-0.0
1,952,403	-				+1.3
1,952,403	-				-0.8
1,952,403	-				+0.0
1,952,403	-				-1.8
1,952,403	-				+0.6
1,952,403	-				-0.4
1,952,403	-				+0.8
1,952,403	-				+0.1
1,952,403	-				+0.8
1,952,403	-				-0.4
1,952,403	-				+0.2
1,952,403	-				-1.3
1,952,403	-				-0.6
1,952,403	-				-0.7
1,952,403	-				-2.0
1,952,403	-				-0.3
1,952,403	-				+0.6
1,952,403	-				-0.8
1,952,403	-				+1.1
1,952,403	-				-0.8
1,952,403	-				+0.6
1,952,403	-				+0.4
1,952,403	-				-0.2
1,952,403	-				-0.7
1,952,403	-				+0.4
1,952,403	-				-0.9
1,952,405	+				+0.7
1,952,405	+				-1.5
1,952,405	+				-0.9
1,952,405	+				-0.0
1,952,405	+				-0.5
1,952,405	+				-1.6
1,952,405	+				-1.3
1,952,406	-				-1.4
1,952,406	-				-1.1
1,952,406	-				-1.1
1,952,406	-				+0.8
1,952,459	+				-0.1
1,952,459	+				+1.1
1,952,459	+				-0.8
1,952,459	+				-2.0
1,952,459	+				-1.4
1,952,459	+				-0.5
1,952,459	+				+1.8
1,952,459	+				-0.2
1,952,459	+				+0.2
1,952,459	+				+0.1
1,952,459	+				-0.4
1,952,459	+				-0.5
1,952,459	+				+0.2
1,952,459	+				-0.5
1,952,459	+				+0.5
1,952,459	+				-1.3
1,952,460	-				+0.3
1,952,460	-				-0.8
1,952,460	-				-2.4
1,952,460	-				-2.0
1,952,460	-				+2.8
1,952,460	-				-0.7
1,952,460	-				-1.9
1,952,460	-				-2.3
1,952,460	-				-1.7
1,952,460	-				-1.7
1,952,460	-				-0.3
1,952,460	-				-1.4
1,952,460	-				-0.3
1,952,460	-				-1.0
1,952,460	-				-1.4
1,952,460	-				+0.3
1,952,460	-				-0.9
1,952,460	-				+1.2
1,952,460	-				-0.1
1,952,460	-				-1.7
1,952,462	+				-0.1
1,952,462	+				-0.8
1,952,462	+				-0.6
1,952,471	+				-1.5
1,952,472	-				-0.4
1,952,472	-				-0.3
1,952,472	-				+0.5
1,952,472	-				-1.1
1,952,607	+		MPMX19_01871	0.29	-0.4
1,952,608	-		MPMX19_01871	0.29	-0.5
1,952,707	+		MPMX19_01871	0.51	-0.1
1,952,707	+		MPMX19_01871	0.51	-1.9
1,952,707	+		MPMX19_01871	0.51	+0.5
1,952,707	+		MPMX19_01871	0.51	-1.2
1,952,707	+		MPMX19_01871	0.51	+0.3
1,952,707	+		MPMX19_01871	0.51	-1.6
1,952,707	+		MPMX19_01871	0.51	-1.0
1,952,707	+		MPMX19_01871	0.51	+0.6
1,952,708	-		MPMX19_01871	0.52	-2.0
1,952,708	-		MPMX19_01871	0.52	-1.5
1,952,708	-		MPMX19_01871	0.52	+1.2
1,952,708	-		MPMX19_01871	0.52	+1.8
1,952,708	-		MPMX19_01871	0.52	+0.2
1,952,708	-		MPMX19_01871	0.52	-0.0
1,952,708	-		MPMX19_01871	0.52	+0.9
1,952,708	-		MPMX19_01871	0.52	+0.1
1,952,708	-		MPMX19_01871	0.52	+1.1
1,952,708	-		MPMX19_01871	0.52	-0.0
1,952,708	-		MPMX19_01871	0.52	-0.1
1,952,708	-		MPMX19_01871	0.52	-0.2
1,952,708	-		MPMX19_01871	0.52	-2.0
1,952,871	+		MPMX19_01871	0.88	-0.5
1,952,871	+		MPMX19_01871	0.88	-0.9
1,952,871	+		MPMX19_01871	0.88	-1.4
1,952,871	+		MPMX19_01871	0.88	-0.4
1,952,871	+		MPMX19_01871	0.88	-0.6
1,952,871	+		MPMX19_01871	0.88	+1.2
1,952,871	+		MPMX19_01871	0.88	-2.0
1,952,872	-		MPMX19_01871	0.88	-0.3
1,952,872	-		MPMX19_01871	0.88	-1.4
1,952,872	-		MPMX19_01871	0.88	-0.2
1,952,872	-		MPMX19_01871	0.88	-1.5
1,952,872	-		MPMX19_01871	0.88	-1.0
1,952,872	-		MPMX19_01871	0.88	-0.0
1,952,872	-		MPMX19_01871	0.88	+0.4
1,952,872	-		MPMX19_01871	0.88	+1.3
1,952,872	-		MPMX19_01871	0.88	-0.8
1,952,872	-		MPMX19_01871	0.88	-0.3
1,952,872	-		MPMX19_01871	0.88	-0.3
1,952,875	+		MPMX19_01871	0.89	-0.7
1,952,875	+		MPMX19_01871	0.89	-0.7
1,952,875	+		MPMX19_01871	0.89	-0.7
1,952,875	+		MPMX19_01871	0.89	-0.8
1,952,875	+		MPMX19_01871	0.89	-0.2
1,952,875	+		MPMX19_01871	0.89	-1.3
1,952,875	+		MPMX19_01871	0.89	+0.1
1,952,875	+		MPMX19_01871	0.89	-1.3
1,952,875	+		MPMX19_01871	0.89	-0.0
1,952,875	+		MPMX19_01871	0.89	-0.7
1,952,875	+		MPMX19_01871	0.89	-0.7
1,952,875	+		MPMX19_01871	0.89	-0.9
1,952,875	+		MPMX19_01871	0.89	-0.3
1,952,875	+		MPMX19_01871	0.89	+1.0
1,952,875	+		MPMX19_01871	0.89	-2.0
1,952,875	+		MPMX19_01871	0.89	-0.3
1,952,875	+		MPMX19_01871	0.89	-0.6
1,952,875	+		MPMX19_01871	0.89	+0.4
1,952,875	+		MPMX19_01871	0.89	-0.2
1,952,875	+		MPMX19_01871	0.89	-0.6
1,952,875	+		MPMX19_01871	0.89	-1.2
1,952,875	+		MPMX19_01871	0.89	-0.2
1,952,875	+		MPMX19_01871	0.89	+1.0
1,952,875	+		MPMX19_01871	0.89	-0.1
1,952,875	+		MPMX19_01871	0.89	+0.6
1,952,875	+		MPMX19_01871	0.89	+0.2
1,952,875	+		MPMX19_01871	0.89	-0.6
1,952,875	+		MPMX19_01871	0.89	-0.0
1,952,875	+		MPMX19_01871	0.89	-1.2
1,952,875	+		MPMX19_01871	0.89	-1.0
1,952,875	+		MPMX19_01871	0.89	-0.9
1,952,875	+		MPMX19_01871	0.89	-0.0
1,952,875	+		MPMX19_01871	0.89	-1.7
1,952,875	+		MPMX19_01871	0.89	-0.3
1,952,875	+		MPMX19_01871	0.89	-1.1
1,952,875	+		MPMX19_01871	0.89	-1.8
1,952,875	+		MPMX19_01871	0.89	-1.1
1,952,876	-		MPMX19_01871	0.89	+0.7
1,952,876	-		MPMX19_01871	0.89	+0.5
1,952,876	-		MPMX19_01871	0.89	-1.0
1,952,876	-		MPMX19_01871	0.89	+0.6
1,952,876	-		MPMX19_01871	0.89	+0.1
1,952,876	-		MPMX19_01871	0.89	-0.4
1,952,876	-		MPMX19_01871	0.89	+1.1
1,952,876	-		MPMX19_01871	0.89	-0.8
1,952,876	-		MPMX19_01871	0.89	-0.3
1,952,876	-		MPMX19_01871	0.89	-2.3
1,952,876	-		MPMX19_01871	0.89	+0.5
1,952,876	-		MPMX19_01871	0.89	-0.1
1,952,876	-		MPMX19_01871	0.89	-0.6
1,952,876	-		MPMX19_01871	0.89	+0.6
1,952,876	-		MPMX19_01871	0.89	+1.1
1,952,876	-		MPMX19_01871	0.89	-1.0
1,952,876	-		MPMX19_01871	0.89	-0.1
1,952,876	-		MPMX19_01871	0.89	-0.0
1,952,876	-		MPMX19_01871	0.89	+0.1
1,952,876	-		MPMX19_01871	0.89	-0.3
1,952,876	-		MPMX19_01871	0.89	-0.9
1,952,876	-		MPMX19_01871	0.89	-2.1
1,952,876	-		MPMX19_01871	0.89	-0.5
1,952,876	-		MPMX19_01871	0.89	-0.6
1,952,876	-		MPMX19_01871	0.89	+0.0
1,952,876	-		MPMX19_01871	0.89	+0.2
1,952,876	-		MPMX19_01871	0.89	-0.6
1,952,876	-		MPMX19_01871	0.89	+1.4
1,952,876	-		MPMX19_01871	0.89	-1.9
1,952,876	-		MPMX19_01871	0.89	-1.2
1,952,876	-		MPMX19_01871	0.89	-0.2
1,952,876	-		MPMX19_01871	0.89	-0.6
1,952,876	-		MPMX19_01871	0.89	-0.6
1,952,876	-		MPMX19_01871	0.89	-0.8
1,952,876	-		MPMX19_01871	0.89	+0.1
1,952,876	-		MPMX19_01871	0.89	-0.5
1,952,876	-		MPMX19_01871	0.89	+0.5
1,952,876	-		MPMX19_01871	0.89	+1.0
1,952,876	-		MPMX19_01871	0.89	-2.6
1,952,876	-		MPMX19_01871	0.89	-0.3
1,952,876	-		MPMX19_01871	0.89	-0.2
1,952,876	-		MPMX19_01871	0.89	-0.2
1,952,876	-		MPMX19_01871	0.89	-0.7
1,952,876	-		MPMX19_01871	0.89	-1.0
1,952,876	-		MPMX19_01871	0.89	-0.4
1,952,876	-		MPMX19_01871	0.89	-2.4
1,952,876	-		MPMX19_01871	0.89	-1.0
1,952,876	-		MPMX19_01871	0.89	-1.2
1,952,876	-		MPMX19_01871	0.89	-0.1
1,952,893	+				-1.8
1,952,893	+				+0.8
1,952,893	+				-0.9
1,952,893	+				-0.5
1,952,893	+				-1.2
1,952,893	+				+0.3
1,952,894	-				-0.7
1,952,894	-				-0.8
1,952,894	-				-1.2
1,952,894	-				-0.8
1,952,894	-				+0.2
1,952,894	-				-0.3
1,952,894	-				+1.8
1,952,894	-				+0.8
1,952,894	-				+0.6
1,952,894	-				+0.5
1,952,923	+				+0.1
1,952,923	+				-0.6
1,952,923	+				+0.6
1,952,923	+				-1.5
1,952,923	+				+1.2
1,952,923	+				-2.4
1,952,923	+				-1.5
1,952,923	+				-0.5
1,952,923	+				-0.8
1,952,923	+				-1.4
1,952,923	+				-2.0
1,952,923	+				-1.0
1,952,923	+				-0.4
1,952,923	+				+1.8
1,952,923	+				-1.7
1,952,923	+				-1.6
1,952,923	+				+0.3
1,952,923	+				-0.7
1,952,923	+				-1.5
1,952,923	+				-2.4
1,952,923	+				-0.7
1,952,923	+				+0.4
1,952,923	+				+1.2
1,952,923	+				-1.0
1,952,923	+				-0.5
1,952,923	+				-0.0
1,952,923	+				+0.2
1,952,923	+				+0.1
1,952,924	-				-1.1
1,952,924	-				-1.7
1,952,924	-				-1.9
1,952,924	-				-1.4
1,952,924	-				-1.7
1,952,924	-				+0.1
1,952,924	-				-0.7
1,952,924	-				-1.5
1,952,924	-				-1.2
1,952,924	-				-0.4
1,952,924	-				-0.5
1,952,924	-				-0.1
1,952,924	-				-0.4
1,952,924	-				-0.4
1,952,924	-				-0.5
1,952,924	-				-1.1
1,952,924	-				-0.8
1,952,924	-				-1.1
1,952,924	-				-0.3
1,952,924	-				-0.8
1,952,924	-				-1.1
1,952,924	-				-1.2
1,952,924	-				+0.2
1,952,924	-				+0.1
1,952,924	-				+1.2
1,952,924	-				-1.2
1,952,992	+				-0.4
1,952,993	-				-0.5
1,952,993	-				-0.5
1,952,993	-				-0.6
1,952,993	-				+0.0
1,952,993	-				+0.3
1,953,075	+				-0.3
1,953,075	+				-1.4
1,953,075	+				-0.9
1,953,075	+				-0.7
1,953,075	+				-0.2
1,953,075	+				-0.5
1,953,075	+				+0.2
1,953,075	+				-2.2
1,953,076	-				-2.1
1,953,076	-				-0.5
1,953,076	-				-0.9
1,953,076	-				-0.2
1,953,076	-				-0.7
1,953,298	+		MPMX19_01872	0.81	-1.0
1,953,298	+		MPMX19_01872	0.81	+1.0
1,953,298	+		MPMX19_01872	0.81	-1.5
1,953,298	+		MPMX19_01872	0.81	-0.8
1,953,298	+		MPMX19_01872	0.81	-0.3
1,953,298	+		MPMX19_01872	0.81	-2.3
1,953,298	+		MPMX19_01872	0.81	-0.2
1,953,298	+		MPMX19_01872	0.81	-1.6
1,953,298	+		MPMX19_01872	0.81	+0.7
1,953,298	+		MPMX19_01872	0.81	-1.9
1,953,298	+		MPMX19_01872	0.81	+0.4
1,953,298	+		MPMX19_01872	0.81	-1.2
1,953,298	+		MPMX19_01872	0.81	-0.5
1,953,298	+		MPMX19_01872	0.81	-0.8
1,953,298	+		MPMX19_01872	0.81	-1.8
1,953,298	+		MPMX19_01872	0.81	+0.2
1,953,299	-		MPMX19_01872	0.81	-1.0
1,953,299	-		MPMX19_01872	0.81	-0.7
1,953,299	-		MPMX19_01872	0.81	-1.4
1,953,299	-		MPMX19_01872	0.81	-0.6
1,953,299	-		MPMX19_01872	0.81	+0.8
1,953,299	-		MPMX19_01872	0.81	-0.1
1,953,299	-		MPMX19_01872	0.81	-1.9
1,953,299	-		MPMX19_01872	0.81	+0.8
1,953,299	-		MPMX19_01872	0.81	-1.4
1,953,299	-		MPMX19_01872	0.81	-0.2
1,953,299	-		MPMX19_01872	0.81	-1.2
1,953,299	-		MPMX19_01872	0.81	-0.4
1,953,299	-		MPMX19_01872	0.81	+0.1
1,953,299	-		MPMX19_01872	0.81	-1.4
1,953,347	-				-1.9
1,953,347	-				+1.0