Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01841

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,921,468	+		MPMX19_01840	0.57	-1.9
1,921,468	+		MPMX19_01840	0.57	-1.2
1,921,468	+		MPMX19_01840	0.57	-0.5
1,921,468	+		MPMX19_01840	0.57	-1.0
1,921,468	+		MPMX19_01840	0.57	+0.3
1,921,468	+		MPMX19_01840	0.57	+1.0
1,921,468	+		MPMX19_01840	0.57	-1.5
1,921,469	-		MPMX19_01840	0.57	-1.4
1,921,469	-		MPMX19_01840	0.57	-0.7
1,921,469	-		MPMX19_01840	0.57	-0.5
1,921,469	-		MPMX19_01840	0.57	+1.0
1,921,469	-		MPMX19_01840	0.57	+2.1
1,921,469	-		MPMX19_01840	0.57	-1.4
1,921,759	+		MPMX19_01840	0.72	+0.6
1,921,917	+		MPMX19_01840	0.81	-0.7
1,921,917	+		MPMX19_01840	0.81	-1.0
1,921,917	+		MPMX19_01840	0.81	-0.4
1,921,918	-		MPMX19_01840	0.81	-1.5
1,921,918	-		MPMX19_01840	0.81	+1.0
1,922,245	+				-0.9
1,922,245	+				-0.5
1,922,245	+				-0.4
1,922,245	+				-0.4
1,922,245	+				-2.1
1,922,245	+				+0.0
1,922,245	+				-0.8
1,922,245	+				+0.5
1,922,245	+				-0.5
1,922,246	-				+0.2
1,922,246	-				+0.2
1,922,246	-				-0.2
1,922,246	-				-1.8
1,922,246	-				-1.4
1,922,260	+				-1.0
1,922,260	+				-0.7
1,922,260	+				+0.1
1,922,260	+				+0.5
1,922,260	+				+0.0
1,922,260	+				-1.5
1,922,260	+				-0.5
1,922,260	+				-1.4
1,922,260	+				-2.0
1,922,260	+				-2.1
1,922,260	+				-1.3
1,922,260	+				+2.0
1,922,260	+				-0.4
1,922,260	+				-1.2
1,922,260	+				+0.0
1,922,260	+				-1.0
1,922,260	+				-0.2
1,922,260	+				-1.4
1,922,260	+				+0.4
1,922,261	-				-0.8
1,922,261	-				-0.0
1,922,261	-				+0.0
1,922,261	-				+0.0
1,922,261	-				-0.3
1,922,261	-				+0.5
1,922,261	-				-2.0
1,922,261	-				-0.8
1,922,261	-				-0.1
1,922,261	-				-0.2
1,922,261	-				-1.9
1,922,261	-				-0.1
1,922,261	-				-1.6
1,922,261	-				-0.2
1,922,261	-				-0.5
1,922,261	-				-0.2
1,922,261	-				-0.7
1,922,284	+				-1.7
1,922,284	+				+0.6
1,922,284	+				-0.7
1,922,284	+				-0.3
1,922,284	+				+0.4
1,922,284	+				-1.5
1,922,284	+				-0.1
1,922,284	+				-1.8
1,922,284	+				+1.3
1,922,284	+				+0.0
1,922,284	+				-0.8
1,922,284	+				-0.8
1,922,284	+				-0.4
1,922,284	+				-2.2
1,922,284	+				+0.6
1,922,284	+				-2.2
1,922,284	+				-0.5
1,922,285	-				-2.7
1,922,285	-				-0.5
1,922,285	-				+0.5
1,922,285	-				-0.0
1,922,285	-				-0.4
1,922,285	-				-0.2
1,922,285	-				+0.6
1,922,285	-				+0.4
1,922,285	-				+1.1
1,922,353	+				-1.8
1,922,353	+				-0.5
1,922,353	+				+1.3
1,922,353	+				-0.8
1,922,354	-				+0.1
1,922,354	-				+0.0
1,922,354	-				-0.9
1,922,472	+				-0.8
1,922,472	+				+0.8
1,922,472	+				+0.8
1,922,472	+				-0.4
1,922,472	+				+0.9
1,922,472	+				+0.1
1,922,472	+				+0.5
1,922,472	+				+0.6
1,922,472	+				-0.1
1,922,473	-				-0.3
1,922,473	-				-0.3
1,922,473	-				-1.1
1,922,473	-				-1.4
1,922,473	-				+0.4
1,922,473	-				+1.1
1,922,473	-				-0.4
1,922,473	-				+2.1
1,922,473	-				+0.2
1,922,658	+		MPMX19_01841	0.28	+0.1
1,922,658	+		MPMX19_01841	0.28	-1.7
1,922,721	+		MPMX19_01841	0.35	+0.4
1,922,722	-		MPMX19_01841	0.35	-0.6
1,922,722	-		MPMX19_01841	0.35	-0.7
1,922,722	-		MPMX19_01841	0.35	+0.0
1,922,722	-		MPMX19_01841	0.35	+0.3
1,922,722	-		MPMX19_01841	0.35	+0.4
1,922,722	-		MPMX19_01841	0.35	+0.6
1,922,994	+		MPMX19_01841	0.65	-1.6
1,923,671	-		MPMX19_01842	0.11	-0.1
1,923,691	+		MPMX19_01842	0.13	+1.0
1,923,691	+		MPMX19_01842	0.13	-1.1
1,923,691	+		MPMX19_01842	0.13	-0.2
1,923,691	+		MPMX19_01842	0.13	-0.2
1,923,691	+		MPMX19_01842	0.13	-0.7
1,923,691	+		MPMX19_01842	0.13	-0.4
1,923,692	-		MPMX19_01842	0.13	-0.9
1,923,692	-		MPMX19_01842	0.13	+0.5
1,923,692	-		MPMX19_01842	0.13	+0.5
1,923,692	-		MPMX19_01842	0.13	-0.7
1,923,692	-		MPMX19_01842	0.13	+0.8
1,923,692	-		MPMX19_01842	0.13	-1.8
1,923,745	+		MPMX19_01842	0.16	-0.6
1,923,745	+		MPMX19_01842	0.16	+0.7
1,923,745	+		MPMX19_01842	0.16	-2.3
1,923,746	-		MPMX19_01842	0.16	+0.4
1,923,746	-		MPMX19_01842	0.16	+0.8
1,923,746	-		MPMX19_01842	0.16	-1.1
1,923,746	-		MPMX19_01842	0.16	+0.4
1,923,746	-		MPMX19_01842	0.16	-2.1
1,923,746	-		MPMX19_01842	0.16	-0.7
1,923,746	-		MPMX19_01842	0.16	+0.2
1,923,746	-		MPMX19_01842	0.16	+1.8
1,923,746	-		MPMX19_01842	0.16	+0.6
1,923,746	-		MPMX19_01842	0.16	+0.4
1,923,746	-		MPMX19_01842	0.16	-0.1
1,923,746	-		MPMX19_01842	0.16	-0.8
1,923,746	-		MPMX19_01842	0.16	-0.9
1,923,746	-		MPMX19_01842	0.16	+0.5
1,923,760	+		MPMX19_01842	0.17	+0.9
1,923,760	+		MPMX19_01842	0.17	-0.6
1,923,760	+		MPMX19_01842	0.17	-1.0
1,923,760	+		MPMX19_01842	0.17	+0.5
1,923,760	+		MPMX19_01842	0.17	-1.3
1,923,760	+		MPMX19_01842	0.17	-1.8
1,923,760	+		MPMX19_01842	0.17	+0.8
1,923,760	+		MPMX19_01842	0.17	+0.5
1,923,760	+		MPMX19_01842	0.17	-0.1
1,923,760	+		MPMX19_01842	0.17	-0.9
1,923,761	-		MPMX19_01842	0.17	-0.1
1,923,761	-		MPMX19_01842	0.17	-0.8
1,923,761	-		MPMX19_01842	0.17	-1.5
1,924,012	-		MPMX19_01842	0.33	+0.5
1,924,012	-		MPMX19_01842	0.33	-0.8
1,924,012	-		MPMX19_01842	0.33	-1.4
1,924,012	-		MPMX19_01842	0.33	+0.4
1,924,012	-		MPMX19_01842	0.33	+0.8
1,924,024	+		MPMX19_01842	0.34	-0.2
1,924,024	+		MPMX19_01842	0.34	-0.5
1,924,024	+		MPMX19_01842	0.34	-0.2
1,924,024	+		MPMX19_01842	0.34	+0.2
1,924,024	+		MPMX19_01842	0.34	+0.6
1,924,024	+		MPMX19_01842	0.34	-0.2
1,924,024	+		MPMX19_01842	0.34	+1.1
1,924,024	+		MPMX19_01842	0.34	+0.5
1,924,025	-		MPMX19_01842	0.34	-0.5
1,924,025	-		MPMX19_01842	0.34	-1.5
1,924,025	-		MPMX19_01842	0.34	-1.9
1,924,025	-		MPMX19_01842	0.34	-0.5
1,924,025	-		MPMX19_01842	0.34	+0.2
1,924,025	-		MPMX19_01842	0.34	+0.2
1,924,025	-		MPMX19_01842	0.34	-0.5
1,924,087	+		MPMX19_01842	0.38	+3.8
1,924,087	+		MPMX19_01842	0.38	-0.8
1,924,087	+		MPMX19_01842	0.38	-0.6
1,924,087	+		MPMX19_01842	0.38	+0.1
1,924,087	+		MPMX19_01842	0.38	-2.0
1,924,088	-		MPMX19_01842	0.38	-1.7
1,924,088	-		MPMX19_01842	0.38	-0.3
1,924,088	-		MPMX19_01842	0.38	+0.9
1,924,088	-		MPMX19_01842	0.38	-0.6
1,924,088	-		MPMX19_01842	0.38	-0.5
1,924,088	-		MPMX19_01842	0.38	+0.8
1,924,088	-		MPMX19_01842	0.38	-0.2
1,924,088	-		MPMX19_01842	0.38	-0.1
1,924,088	-		MPMX19_01842	0.38	+0.3
1,924,088	-		MPMX19_01842	0.38	-0.5
1,924,088	-		MPMX19_01842	0.38	-2.0
1,924,088	-		MPMX19_01842	0.38	-0.5
1,924,088	-		MPMX19_01842	0.38	-0.0
1,924,102	+		MPMX19_01842	0.39	-2.2
1,924,102	+		MPMX19_01842	0.39	+0.5
1,924,102	+		MPMX19_01842	0.39	-1.2
1,924,102	+		MPMX19_01842	0.39	-0.8
1,924,102	+		MPMX19_01842	0.39	-1.2
1,924,102	+		MPMX19_01842	0.39	-0.1
1,924,103	-		MPMX19_01842	0.39	+1.1
1,924,103	-		MPMX19_01842	0.39	-1.1
1,924,103	-		MPMX19_01842	0.39	-1.4