Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01813

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,895,211	+		MPMX19_01812	0.67	-1.2
1,895,211	+		MPMX19_01812	0.67	-0.0
1,895,212	-		MPMX19_01812	0.67	-2.5
1,895,212	-		MPMX19_01812	0.67	-1.4
1,895,406	+		MPMX19_01812	0.76	-0.4
1,895,407	-		MPMX19_01812	0.76	-2.0
1,895,407	-		MPMX19_01812	0.76	-2.4
1,895,407	-		MPMX19_01812	0.76	-0.8
1,895,407	-		MPMX19_01812	0.76	-0.5
1,895,451	+		MPMX19_01812	0.78	-0.2
1,895,451	+		MPMX19_01812	0.78	-0.5
1,895,452	-		MPMX19_01812	0.78	+0.2
1,895,452	-		MPMX19_01812	0.78	-0.4
1,895,452	-		MPMX19_01812	0.78	-0.2
1,895,452	-		MPMX19_01812	0.78	+2.1
1,895,452	-		MPMX19_01812	0.78	+0.8
1,895,481	+		MPMX19_01812	0.79	-0.2
1,895,481	+		MPMX19_01812	0.79	+0.8
1,895,481	+		MPMX19_01812	0.79	-2.7
1,895,482	-		MPMX19_01812	0.80	-1.0
1,895,482	-		MPMX19_01812	0.80	-1.2
1,895,640	+		MPMX19_01812	0.87	-0.2
1,895,640	+		MPMX19_01812	0.87	-0.5
1,895,641	-		MPMX19_01812	0.87	+0.0
1,895,641	-		MPMX19_01812	0.87	+1.4
1,895,641	-		MPMX19_01812	0.87	-0.4
1,895,641	-		MPMX19_01812	0.87	+0.4
1,895,825	+				+1.4
1,895,825	+				-1.3
1,895,825	+				-2.0
1,895,825	+				+0.3
1,895,826	-				+0.7
1,895,826	-				-1.4
1,895,826	-				-0.7
1,895,826	-				-0.0
1,895,838	+				-0.5
1,895,838	+				-0.9
1,895,839	-				+0.2
1,895,839	-				-0.7
1,895,839	-				-0.2
1,895,839	-				+0.6
1,895,839	-				-0.1
1,895,872	+				-1.0
1,895,872	+				-1.2
1,895,872	+				-0.7
1,895,872	+				+0.9
1,895,872	+				-0.0
1,895,873	-				+0.7
1,895,873	-				+0.2
1,895,873	-				+0.0
1,895,873	-				-1.8
1,895,873	-				+0.3
1,895,920	-				+0.8
1,896,033	+				-0.4
1,896,033	+				+1.2
1,896,034	-				+1.3
1,896,127	+				+0.2
1,896,127	+				+0.6
1,896,127	+				-0.4
1,896,127	+				-1.9
1,896,127	+				+0.3
1,896,127	+				+0.5
1,896,127	+				+2.8
1,896,127	+				+0.8
1,896,127	+				+0.3
1,896,127	+				+0.2
1,896,127	+				-0.0
1,896,127	+				+1.2
1,896,127	+				+0.8
1,896,127	+				-1.3
1,896,127	+				-2.7
1,896,127	+				-1.9
1,896,127	+				+0.1
1,896,127	+				-0.2
1,896,127	+				+0.5
1,896,128	-				-0.2
1,896,128	-				-1.5
1,896,128	-				-0.9
1,896,128	-				-1.5
1,896,128	-				+1.5
1,896,128	-				+0.1
1,896,128	-				+0.3
1,896,128	-				+0.3
1,896,128	-				-0.1
1,896,128	-				-0.6
1,896,128	-				-0.5
1,896,128	-				-1.0
1,896,128	-				+0.1
1,896,128	-				-0.3
1,896,128	-				-0.9
1,896,128	-				-1.9
1,896,128	-				-1.3
1,896,128	-				-0.7
1,896,128	-				-1.0
1,896,128	-				-2.3
1,896,128	-				-2.5
1,896,128	-				-1.7
1,896,128	-				-1.4
1,896,128	-				+0.8
1,896,128	-				-0.7
1,896,128	-				-0.7
1,896,128	-				-0.5
1,896,128	-				-0.1
1,896,128	-				-0.8
1,896,128	-				-0.8
1,896,128	-				-0.4
1,896,128	-				-0.8
1,896,128	-				-0.1
1,896,128	-				-1.9
1,896,128	-				-1.0
1,896,128	-				-0.3
1,896,128	-				+0.2
1,896,128	-				-0.1
1,896,131	+				+0.5
1,896,131	+				-0.2
1,896,131	+				+0.6
1,896,131	+				+0.2
1,896,131	+				-1.1
1,896,131	+				+1.8
1,896,131	+				-0.3
1,896,132	-				-0.1
1,896,132	-				+0.1
1,896,132	-				+0.7
1,896,132	-				-0.2
1,896,132	-				-1.7
1,896,132	-				-1.4
1,896,132	-				+0.2
1,896,132	-				+1.8
1,896,132	-				-0.4
1,896,132	-				-1.0
1,896,132	-				-1.5
1,896,132	-				+3.5
1,896,132	-				-0.3
1,896,132	-				-0.6
1,896,132	-				+0.8
1,896,132	-				+0.2
1,896,481	+		MPMX19_01813	0.17	-0.9
1,896,481	+		MPMX19_01813	0.17	+1.0
1,896,481	+		MPMX19_01813	0.17	-0.2
1,896,481	+		MPMX19_01813	0.17	+0.5
1,896,481	+		MPMX19_01813	0.17	-1.1
1,896,481	+		MPMX19_01813	0.17	-0.4
1,896,481	+		MPMX19_01813	0.17	-0.7
1,896,481	+		MPMX19_01813	0.17	-0.6
1,896,481	+		MPMX19_01813	0.17	+1.0
1,896,481	+		MPMX19_01813	0.17	+2.0
1,896,481	+		MPMX19_01813	0.17	-1.3
1,896,481	+		MPMX19_01813	0.17	-1.1
1,896,481	+		MPMX19_01813	0.17	+1.2
1,896,482	-		MPMX19_01813	0.17	+0.3
1,896,482	-		MPMX19_01813	0.17	-1.2
1,896,482	-		MPMX19_01813	0.17	-0.5
1,896,482	-		MPMX19_01813	0.17	-0.5
1,896,482	-		MPMX19_01813	0.17	-0.4
1,896,482	-		MPMX19_01813	0.17	-1.1
1,896,482	-		MPMX19_01813	0.17	+1.0
1,896,482	-		MPMX19_01813	0.17	-1.7
1,896,482	-		MPMX19_01813	0.17	-0.5
1,896,482	-		MPMX19_01813	0.17	+0.5
1,896,482	-		MPMX19_01813	0.17	-1.2
1,896,482	-		MPMX19_01813	0.17	+0.3
1,896,482	-		MPMX19_01813	0.17	+0.9
1,896,482	-		MPMX19_01813	0.17	+0.3
1,896,581	+		MPMX19_01813	0.23	-1.2
1,896,581	+		MPMX19_01813	0.23	-1.4
1,896,581	+		MPMX19_01813	0.23	+0.8
1,896,581	+		MPMX19_01813	0.23	-2.2
1,896,581	+		MPMX19_01813	0.23	+0.4
1,896,581	+		MPMX19_01813	0.23	-1.5
1,896,581	+		MPMX19_01813	0.23	+1.2
1,896,581	+		MPMX19_01813	0.23	-1.1
1,896,582	-		MPMX19_01813	0.23	-0.8
1,896,582	-		MPMX19_01813	0.23	-0.0
1,896,582	-		MPMX19_01813	0.23	-0.1
1,896,582	-		MPMX19_01813	0.23	+0.5
1,896,582	-		MPMX19_01813	0.23	-1.2
1,896,582	-		MPMX19_01813	0.23	+0.2
1,896,582	-		MPMX19_01813	0.23	+0.7
1,896,582	-		MPMX19_01813	0.23	-0.7
1,896,582	-		MPMX19_01813	0.23	-0.2
1,896,582	-		MPMX19_01813	0.23	+0.6
1,896,582	-		MPMX19_01813	0.23	-0.7
1,896,582	-		MPMX19_01813	0.23	+0.1
1,896,582	-		MPMX19_01813	0.23	+0.2
1,896,582	-		MPMX19_01813	0.23	-1.0
1,896,582	-		MPMX19_01813	0.23	-1.0
1,896,589	+		MPMX19_01813	0.23	-1.2
1,896,589	+		MPMX19_01813	0.23	-1.1
1,896,589	+		MPMX19_01813	0.23	-1.8
1,896,589	+		MPMX19_01813	0.23	-0.2
1,896,589	+		MPMX19_01813	0.23	-2.3
1,896,589	+		MPMX19_01813	0.23	-0.6
1,896,589	+		MPMX19_01813	0.23	-0.0
1,896,589	+		MPMX19_01813	0.23	-0.5
1,896,589	+		MPMX19_01813	0.23	+0.3
1,896,589	+		MPMX19_01813	0.23	-0.6
1,896,589	+		MPMX19_01813	0.23	+0.3
1,896,589	+		MPMX19_01813	0.23	-1.8
1,896,589	+		MPMX19_01813	0.23	+0.6
1,896,589	+		MPMX19_01813	0.23	+0.8
1,896,589	+		MPMX19_01813	0.23	+0.5
1,896,589	+		MPMX19_01813	0.23	-1.8
1,896,590	-		MPMX19_01813	0.23	-0.5
1,896,590	-		MPMX19_01813	0.23	-0.8
1,896,590	-		MPMX19_01813	0.23	-1.5
1,896,590	-		MPMX19_01813	0.23	+0.2
1,896,590	-		MPMX19_01813	0.23	-0.2
1,896,590	-		MPMX19_01813	0.23	-2.0
1,896,590	-		MPMX19_01813	0.23	-0.7
1,896,590	-		MPMX19_01813	0.23	+0.8
1,896,590	-		MPMX19_01813	0.23	-0.7
1,896,590	-		MPMX19_01813	0.23	-0.0
1,896,590	-		MPMX19_01813	0.23	-0.8
1,896,590	-		MPMX19_01813	0.23	-0.2
1,896,590	-		MPMX19_01813	0.23	-1.0
1,896,590	-		MPMX19_01813	0.23	+0.5
1,896,590	-		MPMX19_01813	0.23	-1.6
1,896,590	-		MPMX19_01813	0.23	+0.9
1,896,590	-		MPMX19_01813	0.23	+0.0
1,896,590	-		MPMX19_01813	0.23	-0.5
1,896,616	+		MPMX19_01813	0.25	-0.6
1,896,616	+		MPMX19_01813	0.25	-0.2
1,896,616	+		MPMX19_01813	0.25	+0.9
1,896,616	+		MPMX19_01813	0.25	-0.5
1,896,616	+		MPMX19_01813	0.25	+2.2
1,896,616	+		MPMX19_01813	0.25	-1.5
1,896,616	+		MPMX19_01813	0.25	-0.3
1,896,616	+		MPMX19_01813	0.25	-0.5
1,896,616	+		MPMX19_01813	0.25	-1.0
1,896,616	+		MPMX19_01813	0.25	+0.3
1,896,616	+		MPMX19_01813	0.25	-1.0
1,896,617	-		MPMX19_01813	0.25	-0.5
1,896,617	-		MPMX19_01813	0.25	-0.2
1,896,617	-		MPMX19_01813	0.25	-0.4
1,896,617	-		MPMX19_01813	0.25	-1.5
1,896,617	-		MPMX19_01813	0.25	-0.1
1,896,617	-		MPMX19_01813	0.25	-0.0
1,896,617	-		MPMX19_01813	0.25	-1.7
1,896,617	-		MPMX19_01813	0.25	-0.2
1,896,617	-		MPMX19_01813	0.25	-1.0
1,896,617	-		MPMX19_01813	0.25	-1.3
1,896,691	+		MPMX19_01813	0.29	-1.5
1,896,691	+		MPMX19_01813	0.29	+1.5
1,896,691	+		MPMX19_01813	0.29	-1.5
1,896,691	+		MPMX19_01813	0.29	-2.5
1,896,692	-		MPMX19_01813	0.29	-0.7
1,896,692	-		MPMX19_01813	0.29	+1.0
1,896,692	-		MPMX19_01813	0.29	-2.4
1,896,692	-		MPMX19_01813	0.29	+0.2
1,896,692	-		MPMX19_01813	0.29	-1.3
1,896,692	-		MPMX19_01813	0.29	-0.4
1,896,692	-		MPMX19_01813	0.29	+0.3
1,896,730	+		MPMX19_01813	0.31	+0.1
1,896,730	+		MPMX19_01813	0.31	-0.8
1,896,730	+		MPMX19_01813	0.31	+0.3
1,896,730	+		MPMX19_01813	0.31	+0.6
1,896,730	+		MPMX19_01813	0.31	-1.2
1,896,730	+		MPMX19_01813	0.31	-1.2
1,896,730	+		MPMX19_01813	0.31	-1.4
1,896,730	+		MPMX19_01813	0.31	-1.2
1,896,730	+		MPMX19_01813	0.31	+0.3
1,896,731	-		MPMX19_01813	0.31	+0.0
1,896,731	-		MPMX19_01813	0.31	+0.2
1,896,731	-		MPMX19_01813	0.31	-1.0
1,896,731	-		MPMX19_01813	0.31	+0.1
1,896,731	-		MPMX19_01813	0.31	+1.0
1,896,731	-		MPMX19_01813	0.31	-0.8
1,896,731	-		MPMX19_01813	0.31	-1.4
1,896,731	-		MPMX19_01813	0.31	+0.3
1,896,731	-		MPMX19_01813	0.31	+2.0
1,896,731	-		MPMX19_01813	0.31	-0.4
1,896,731	-		MPMX19_01813	0.31	-1.0
1,896,731	-		MPMX19_01813	0.31	-0.1
1,896,772	+		MPMX19_01813	0.34	-0.0
1,896,772	+		MPMX19_01813	0.34	+0.5
1,896,772	+		MPMX19_01813	0.34	+0.1
1,896,772	+		MPMX19_01813	0.34	+0.4
1,896,773	-		MPMX19_01813	0.34	-0.8
1,896,773	-		MPMX19_01813	0.34	-0.3
1,896,773	-		MPMX19_01813	0.34	-1.4
1,896,773	-		MPMX19_01813	0.34	-0.4
1,896,781	+		MPMX19_01813	0.34	-0.9
1,896,781	+		MPMX19_01813	0.34	+1.0
1,896,781	+		MPMX19_01813	0.34	-0.5
1,896,782	-		MPMX19_01813	0.35	+0.2
1,896,830	-		MPMX19_01813	0.37	-1.4
1,896,830	-		MPMX19_01813	0.37	-0.1
1,896,830	-		MPMX19_01813	0.37	+0.5
1,896,830	-		MPMX19_01813	0.37	+0.1
1,896,927	-		MPMX19_01813	0.43	+0.4
1,896,949	-		MPMX19_01813	0.44	-1.4
1,897,108	+		MPMX19_01813	0.54	-1.1
1,897,108	+		MPMX19_01813	0.54	-1.3
1,897,108	+		MPMX19_01813	0.54	-0.0
1,897,108	+		MPMX19_01813	0.54	+0.9
1,897,108	+		MPMX19_01813	0.54	-0.8
1,897,108	+		MPMX19_01813	0.54	+0.6
1,897,108	+		MPMX19_01813	0.54	+0.3
1,897,108	+		MPMX19_01813	0.54	-0.6
1,897,108	+		MPMX19_01813	0.54	-0.6
1,897,108	+		MPMX19_01813	0.54	+0.6
1,897,108	+		MPMX19_01813	0.54	-1.4
1,897,108	+		MPMX19_01813	0.54	-0.1
1,897,108	+		MPMX19_01813	0.54	-0.8
1,897,108	+		MPMX19_01813	0.54	-2.6
1,897,109	-		MPMX19_01813	0.54	+1.2
1,897,109	-		MPMX19_01813	0.54	-0.6
1,897,109	-		MPMX19_01813	0.54	-0.2
1,897,109	-		MPMX19_01813	0.54	+1.1
1,897,109	-		MPMX19_01813	0.54	+0.5
1,897,109	-		MPMX19_01813	0.54	-2.0
1,897,109	-		MPMX19_01813	0.54	+0.6
1,897,109	-		MPMX19_01813	0.54	+0.3
1,897,109	-		MPMX19_01813	0.54	-1.2
1,897,109	-		MPMX19_01813	0.54	+0.5
1,897,492	+		MPMX19_01813	0.77	-0.9
1,897,492	+		MPMX19_01813	0.77	-0.0
1,897,492	+		MPMX19_01813	0.77	-0.7
1,897,492	+		MPMX19_01813	0.77	+0.0
1,897,492	+		MPMX19_01813	0.77	+0.2
1,897,493	-		MPMX19_01813	0.77	+0.8
1,897,493	-		MPMX19_01813	0.77	+1.2
1,897,567	+		MPMX19_01813	0.81	-1.0
1,897,567	+		MPMX19_01813	0.81	+0.0
1,897,567	+		MPMX19_01813	0.81	-0.5
1,897,567	+		MPMX19_01813	0.81	-0.8
1,897,567	+		MPMX19_01813	0.81	+0.0
1,897,567	+		MPMX19_01813	0.81	-0.9
1,897,567	+		MPMX19_01813	0.81	-0.2
1,897,567	+		MPMX19_01813	0.81	-2.9
1,897,567	+		MPMX19_01813	0.81	-1.0
1,897,567	+		MPMX19_01813	0.81	-0.8
1,897,567	+		MPMX19_01813	0.81	+0.6
1,897,567	+		MPMX19_01813	0.81	-2.0
1,897,567	+		MPMX19_01813	0.81	-1.2
1,897,567	+		MPMX19_01813	0.81	+0.0
1,897,567	+		MPMX19_01813	0.81	+0.3
1,897,567	+		MPMX19_01813	0.81	+0.2
1,897,567	+		MPMX19_01813	0.81	-2.5
1,897,567	+		MPMX19_01813	0.81	-1.9
1,897,567	+		MPMX19_01813	0.81	+0.1
1,897,567	+		MPMX19_01813	0.81	-0.0
1,897,568	-		MPMX19_01813	0.81	-1.0
1,897,568	-		MPMX19_01813	0.81	-1.0
1,897,568	-		MPMX19_01813	0.81	-1.8
1,897,568	-		MPMX19_01813	0.81	+0.0
1,897,568	-		MPMX19_01813	0.81	-0.4
1,897,568	-		MPMX19_01813	0.81	-0.2
1,897,568	-		MPMX19_01813	0.81	-0.2
1,897,568	-		MPMX19_01813	0.81	-1.3
1,897,568	-		MPMX19_01813	0.81	+1.8
1,897,568	-		MPMX19_01813	0.81	-1.4
1,897,568	-		MPMX19_01813	0.81	-0.5
1,897,568	-		MPMX19_01813	0.81	-0.0
1,897,568	-		MPMX19_01813	0.81	+0.6
1,897,568	-		MPMX19_01813	0.81	-1.5
1,897,582	+		MPMX19_01813	0.82	+0.8
1,897,582	+		MPMX19_01813	0.82	-0.5
1,897,582	+		MPMX19_01813	0.82	-0.4
1,897,582	+		MPMX19_01813	0.82	-0.4
1,897,582	+		MPMX19_01813	0.82	-2.2
1,897,583	-		MPMX19_01813	0.82	-0.5
1,897,583	-		MPMX19_01813	0.82	+1.3
1,897,583	-		MPMX19_01813	0.82	-2.2
1,897,584	+		MPMX19_01813	0.82	+0.1
1,897,584	+		MPMX19_01813	0.82	+0.3
1,897,584	+		MPMX19_01813	0.82	-0.9
1,897,584	+		MPMX19_01813	0.82	-0.7
1,897,584	+		MPMX19_01813	0.82	-1.3
1,897,585	-		MPMX19_01813	0.82	+0.1
1,897,585	-		MPMX19_01813	0.82	-0.8
1,897,585	-		MPMX19_01813	0.82	-0.5
1,897,585	-		MPMX19_01813	0.82	+0.2
1,897,585	-		MPMX19_01813	0.82	-0.6
1,897,585	-		MPMX19_01813	0.82	-0.9
1,897,831	+				-1.5
1,897,831	+				-0.5
1,897,831	+				+0.6
1,897,832	-				+0.3
1,897,832	-				-1.0
1,897,941	+				-1.0
1,898,299	+				+0.5
1,898,299	+				-1.2
1,898,337	+				+0.5
1,898,337	+				-1.7
1,898,337	+				-0.5