Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01811

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,893,279	+		MPMX19_01811	0.23	-0.8
1,893,279	+		MPMX19_01811	0.23	-1.4
1,893,279	+		MPMX19_01811	0.23	-1.4
1,893,279	+		MPMX19_01811	0.23	-0.2
1,893,279	+		MPMX19_01811	0.23	+1.8
1,893,279	+		MPMX19_01811	0.23	-0.9
1,893,280	-		MPMX19_01811	0.23	-1.0
1,893,280	-		MPMX19_01811	0.23	-1.1
1,893,280	-		MPMX19_01811	0.23	-0.3
1,893,682	+				-1.7
1,893,682	+				-0.1
1,893,683	-				+1.0
1,893,727	+				-0.5
1,893,727	+				-0.2
1,893,727	+				+0.2
1,893,727	+				-0.5
1,893,727	+				-1.2
1,893,727	+				-0.0
1,893,727	+				+1.2
1,893,727	+				-0.0
1,893,727	+				-0.1
1,893,727	+				-0.5
1,893,727	+				+0.0
1,893,727	+				+0.8
1,893,727	+				+0.5
1,893,727	+				+0.0
1,893,727	+				-1.2
1,893,727	+				+0.3
1,893,727	+				-1.4
1,893,727	+				+0.1
1,893,727	+				+1.2
1,893,727	+				+2.8
1,893,727	+				-0.1
1,893,727	+				-1.0
1,893,727	+				-0.8
1,893,727	+				-1.5
1,893,727	+				-0.7
1,893,727	+				+1.0
1,893,727	+				-0.5
1,893,727	+				+2.2
1,893,727	+				-1.0
1,893,727	+				-0.0
1,893,727	+				-1.3
1,893,727	+				+0.5
1,893,727	+				+0.8
1,893,727	+				+1.1
1,893,727	+				+0.6
1,893,727	+				+0.8
1,893,727	+				+0.0
1,893,727	+				-0.7
1,893,727	+				-0.6
1,893,728	-				+0.6
1,893,728	-				-0.1
1,893,728	-				-0.7
1,893,728	-				+0.3
1,893,728	-				+0.2
1,893,728	-				+0.4
1,893,728	-				-1.5
1,893,728	-				-1.5
1,893,728	-				+0.7
1,893,728	-				-0.9
1,893,728	-				-0.1
1,893,728	-				-2.1
1,893,728	-				+0.8
1,893,728	-				-0.2
1,893,728	-				+0.5
1,893,728	-				-0.8
1,893,728	-				-0.8
1,893,728	-				+0.3
1,893,728	-				-0.8
1,893,728	-				+0.5
1,893,728	-				+0.5
1,893,728	-				+1.0
1,893,728	-				+0.5
1,893,728	-				-1.0
1,893,728	-				+0.5
1,893,728	-				-0.8
1,893,728	-				+0.6
1,893,728	-				+0.3
1,893,728	-				+0.5
1,893,729	+				-0.8
1,893,729	+				+0.5
1,893,729	+				-0.5
1,893,729	+				-1.8
1,893,729	+				-0.0
1,893,729	+				+1.2
1,893,729	+				-1.2
1,893,729	+				-0.4
1,893,729	+				-1.8
1,893,729	+				-1.0
1,893,729	+				-0.8
1,893,729	+				+1.0
1,893,729	+				+1.0
1,893,729	+				+0.3
1,893,729	+				+0.5
1,893,729	+				-0.5
1,893,729	+				+0.6
1,893,729	+				-0.6
1,893,729	+				+0.2
1,893,729	+				-0.2
1,893,729	+				-0.8
1,893,729	+				+0.2
1,893,729	+				+0.3
1,893,729	+				-0.8
1,893,729	+				-0.7
1,893,729	+				-0.2
1,893,730	-				-0.7
1,893,730	-				+1.1
1,893,730	-				+0.8
1,893,730	-				+0.8
1,893,730	-				-0.8
1,893,730	-				-0.5
1,893,730	-				-0.6
1,893,730	-				-1.3
1,893,730	-				-1.4
1,893,730	-				+0.6
1,893,730	-				-0.3
1,893,730	-				+0.5
1,893,730	-				-1.1
1,893,730	-				+1.0
1,893,730	-				-1.4
1,893,730	-				-0.1
1,893,730	-				+0.9
1,893,730	-				-0.5
1,893,730	-				+2.8
1,893,730	-				+0.7
1,893,730	-				-0.1
1,893,730	-				-1.1
1,893,730	-				-1.0
1,893,730	-				+0.4
1,893,730	-				-1.7
1,893,730	-				-1.5
1,893,730	-				+1.0
1,893,730	-				+0.6
1,893,730	-				-0.2
1,893,730	-				-0.9
1,893,730	-				-1.1
1,893,730	-				+1.7
1,893,730	-				-0.9
1,893,730	-				-0.7
1,893,730	-				-0.3
1,893,730	-				+0.5
1,893,731	+				-0.3
1,893,731	+				-1.4
1,893,731	+				-1.2
1,893,731	+				-0.5
1,893,731	+				-1.0
1,893,731	+				-0.4
1,893,731	+				-1.5
1,893,731	+				+1.0
1,893,731	+				+0.0
1,893,731	+				-0.0
1,893,731	+				-0.9
1,893,731	+				+0.3
1,893,731	+				-0.2
1,893,731	+				-0.0
1,893,731	+				-0.8
1,893,731	+				-1.0
1,893,731	+				+0.5
1,893,731	+				-2.2
1,893,731	+				+0.6
1,893,731	+				-0.7
1,893,731	+				-0.3
1,893,731	+				-0.5
1,893,731	+				-2.4
1,893,731	+				-0.6
1,893,731	+				+0.6
1,893,731	+				+0.1
1,893,731	+				+2.3
1,893,731	+				-0.2
1,893,731	+				-1.7
1,893,731	+				+0.2
1,893,731	+				+0.7
1,893,731	+				+0.6
1,893,731	+				-0.1
1,893,731	+				+0.4
1,893,731	+				+0.3
1,893,731	+				+0.2
1,893,731	+				+0.6
1,893,731	+				-0.4
1,893,731	+				+0.4
1,893,731	+				+0.4
1,893,731	+				+0.8
1,893,731	+				-0.7
1,893,732	-				-1.8
1,893,732	-				+1.0
1,893,732	-				-0.2
1,893,732	-				+0.4
1,893,732	-				+0.5
1,893,732	-				-0.0
1,893,732	-				-1.9
1,893,732	-				-0.4
1,893,732	-				-0.5
1,893,732	-				+0.7
1,893,732	-				-0.4
1,893,732	-				-1.2
1,893,732	-				-0.4
1,893,732	-				-1.0
1,893,732	-				-0.5
1,893,732	-				+1.6
1,893,732	-				+1.4
1,893,732	-				+0.5
1,893,732	-				+0.5
1,893,732	-				+0.2
1,893,732	-				+1.3
1,893,732	-				-1.8
1,893,732	-				-1.5
1,893,732	-				-0.4
1,893,732	-				-1.5
1,893,732	-				-0.0
1,893,732	-				-0.0
1,893,732	-				+0.1
1,893,732	-				-1.1
1,893,732	-				-0.2
1,893,732	-				+0.6
1,893,732	-				-0.4
1,893,732	-				-0.7
1,893,732	-				+0.4
1,893,732	-				-1.5
1,893,732	-				-0.1
1,893,732	-				+0.2
1,893,732	-				+1.6
1,893,737	+				-0.5
1,893,737	+				+0.4
1,893,737	+				+0.8
1,893,737	+				+0.8
1,893,737	+				-0.8
1,893,737	+				-1.4
1,893,737	+				-0.8
1,893,738	-				-0.5
1,893,738	-				-2.3
1,893,738	-				-0.8
1,893,933	-				+0.2
1,894,176	+		MPMX19_01812	0.19	+0.3
1,894,176	+		MPMX19_01812	0.19	-0.7
1,894,176	+		MPMX19_01812	0.19	-1.2
1,894,176	+		MPMX19_01812	0.19	-1.4
1,894,177	-		MPMX19_01812	0.19	-0.9
1,894,177	-		MPMX19_01812	0.19	+0.8
1,894,236	+		MPMX19_01812	0.22	-0.3
1,894,677	+		MPMX19_01812	0.42	-0.2
1,894,677	+		MPMX19_01812	0.42	-2.0
1,894,677	+		MPMX19_01812	0.42	+0.2
1,894,677	+		MPMX19_01812	0.42	-0.2
1,894,677	+		MPMX19_01812	0.42	-0.5
1,894,677	+		MPMX19_01812	0.42	-0.0
1,894,677	+		MPMX19_01812	0.42	-1.0
1,894,677	+		MPMX19_01812	0.42	-0.4
1,894,677	+		MPMX19_01812	0.42	-2.0
1,894,677	+		MPMX19_01812	0.42	-2.7
1,894,677	+		MPMX19_01812	0.42	-0.0
1,894,678	-		MPMX19_01812	0.42	-0.3
1,894,678	-		MPMX19_01812	0.42	-2.5
1,894,678	-		MPMX19_01812	0.42	-0.7
1,894,678	-		MPMX19_01812	0.42	+0.4
1,894,678	-		MPMX19_01812	0.42	-0.4
1,894,678	-		MPMX19_01812	0.42	+0.6
1,894,678	-		MPMX19_01812	0.42	-2.5
1,894,678	-		MPMX19_01812	0.42	+1.5
1,894,680	+		MPMX19_01812	0.42	-1.2
1,894,680	+		MPMX19_01812	0.42	+0.5
1,894,680	+		MPMX19_01812	0.42	-0.9
1,894,680	+		MPMX19_01812	0.42	+0.6
1,894,680	+		MPMX19_01812	0.42	-0.2
1,894,680	+		MPMX19_01812	0.42	-1.9
1,894,680	+		MPMX19_01812	0.42	+0.2
1,894,680	+		MPMX19_01812	0.42	-1.7
1,894,680	+		MPMX19_01812	0.42	+0.8
1,894,680	+		MPMX19_01812	0.42	+1.8
1,894,680	+		MPMX19_01812	0.42	-0.9
1,894,680	+		MPMX19_01812	0.42	-1.5
1,894,681	-		MPMX19_01812	0.42	+0.3
1,894,681	-		MPMX19_01812	0.42	-0.1
1,894,681	-		MPMX19_01812	0.42	+0.2
1,894,681	-		MPMX19_01812	0.42	-0.4
1,894,681	-		MPMX19_01812	0.42	+0.6
1,894,681	-		MPMX19_01812	0.42	+1.8
1,894,681	-		MPMX19_01812	0.42	-1.0
1,894,681	-		MPMX19_01812	0.42	-0.5
1,894,681	-		MPMX19_01812	0.42	-1.0
1,894,681	-		MPMX19_01812	0.42	+0.3
1,894,681	-		MPMX19_01812	0.42	-0.0
1,894,681	-		MPMX19_01812	0.42	-0.8
1,894,681	-		MPMX19_01812	0.42	+0.0
1,894,681	-		MPMX19_01812	0.42	-0.3
1,894,681	-		MPMX19_01812	0.42	-0.8
1,894,681	-		MPMX19_01812	0.42	-1.3
1,894,716	+		MPMX19_01812	0.44	-0.4