Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01799

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,882,674	-				-0.5
1,883,258	-				+0.2
1,883,294	-				-0.5
1,883,294	-				-0.1
1,883,356	-				-1.7
1,883,356	-				-0.6
1,883,356	-				-2.4
1,883,356	-				-0.4
1,883,388	+				-1.0
1,883,388	+				+0.4
1,883,388	+				-0.1
1,883,388	+				-0.8
1,883,388	+				-1.1
1,883,388	+				+0.1
1,883,388	+				-1.8
1,883,388	+				+0.2
1,883,388	+				-2.4
1,883,388	+				+0.8
1,883,388	+				-0.5
1,883,388	+				-0.1
1,883,388	+				-0.0
1,883,388	+				-0.1
1,883,388	+				+0.7
1,883,388	+				-0.2
1,883,389	-				+0.5
1,883,389	-				-0.4
1,883,389	-				-0.7
1,883,389	-				+0.6
1,883,389	-				-1.2
1,883,389	-				-1.1
1,883,389	-				-0.2
1,883,389	-				-0.7
1,883,389	-				+0.4
1,883,389	-				-0.7
1,883,389	-				-0.8
1,883,465	+		MPMX19_01799	0.15	-1.1
1,883,465	+		MPMX19_01799	0.15	-0.1
1,883,465	+		MPMX19_01799	0.15	-0.0
1,883,465	+		MPMX19_01799	0.15	+2.5
1,883,465	+		MPMX19_01799	0.15	+0.3
1,883,465	+		MPMX19_01799	0.15	-0.1
1,883,465	+		MPMX19_01799	0.15	-1.2
1,883,465	+		MPMX19_01799	0.15	-1.8
1,883,465	+		MPMX19_01799	0.15	+0.1
1,883,466	-		MPMX19_01799	0.15	-1.1
1,883,466	-		MPMX19_01799	0.15	-0.1
1,883,466	-		MPMX19_01799	0.15	+0.6
1,883,466	-		MPMX19_01799	0.15	+0.9
1,883,466	-		MPMX19_01799	0.15	-0.3
1,883,466	-		MPMX19_01799	0.15	-0.3
1,883,466	-		MPMX19_01799	0.15	-2.3
1,883,466	-		MPMX19_01799	0.15	-1.0
1,883,466	-		MPMX19_01799	0.15	-0.8
1,883,483	+		MPMX19_01799	0.19	-1.2
1,883,483	+		MPMX19_01799	0.19	-1.1
1,883,483	+		MPMX19_01799	0.19	+0.4
1,883,483	+		MPMX19_01799	0.19	-1.0
1,883,483	+		MPMX19_01799	0.19	+0.1
1,883,483	+		MPMX19_01799	0.19	+0.5
1,883,484	-		MPMX19_01799	0.19	+0.4
1,883,484	-		MPMX19_01799	0.19	-0.7
1,883,484	-		MPMX19_01799	0.19	-0.6
1,883,484	-		MPMX19_01799	0.19	+0.2
1,883,484	-		MPMX19_01799	0.19	-1.3
1,883,510	+		MPMX19_01799	0.25	-1.8
1,883,510	+		MPMX19_01799	0.25	-0.1
1,883,510	+		MPMX19_01799	0.25	-0.2
1,883,511	-		MPMX19_01799	0.25	-3.0
1,883,511	-		MPMX19_01799	0.25	-0.4
1,883,511	-		MPMX19_01799	0.25	+1.0
1,883,511	-		MPMX19_01799	0.25	+0.3
1,883,511	-		MPMX19_01799	0.25	-0.8
1,883,511	-		MPMX19_01799	0.25	-0.1
1,883,579	+		MPMX19_01799	0.41	-0.0
1,883,579	+		MPMX19_01799	0.41	-1.5
1,883,580	-		MPMX19_01799	0.41	-1.1
1,883,600	+		MPMX19_01799	0.46	-1.2
1,883,600	+		MPMX19_01799	0.46	-0.2
1,883,600	+		MPMX19_01799	0.46	-0.0
1,883,600	+		MPMX19_01799	0.46	+0.1
1,883,600	+		MPMX19_01799	0.46	+0.3
1,883,600	+		MPMX19_01799	0.46	-0.2
1,883,600	+		MPMX19_01799	0.46	-2.7
1,883,600	+		MPMX19_01799	0.46	+0.6
1,883,600	+		MPMX19_01799	0.46	+0.8
1,883,600	+		MPMX19_01799	0.46	-0.0
1,883,600	+		MPMX19_01799	0.46	+0.9
1,883,600	+		MPMX19_01799	0.46	-1.4
1,883,600	+		MPMX19_01799	0.46	-0.6
1,883,600	+		MPMX19_01799	0.46	+0.1
1,883,600	+		MPMX19_01799	0.46	-2.4
1,883,600	+		MPMX19_01799	0.46	-1.5
1,883,600	+		MPMX19_01799	0.46	+0.1
1,883,600	+		MPMX19_01799	0.46	-0.8
1,883,600	+		MPMX19_01799	0.46	+0.5
1,883,600	+		MPMX19_01799	0.46	-0.3
1,883,600	+		MPMX19_01799	0.46	+0.4
1,883,600	+		MPMX19_01799	0.46	-1.1
1,883,600	+		MPMX19_01799	0.46	-0.0
1,883,601	-		MPMX19_01799	0.46	+1.1
1,883,601	-		MPMX19_01799	0.46	+1.0
1,883,601	-		MPMX19_01799	0.46	-0.7
1,883,601	-		MPMX19_01799	0.46	-0.1
1,883,601	-		MPMX19_01799	0.46	+0.4
1,883,601	-		MPMX19_01799	0.46	-0.4
1,883,601	-		MPMX19_01799	0.46	+1.4
1,883,601	-		MPMX19_01799	0.46	-0.7
1,883,601	-		MPMX19_01799	0.46	-2.0
1,883,601	-		MPMX19_01799	0.46	-0.5
1,883,601	-		MPMX19_01799	0.46	-0.6
1,883,601	-		MPMX19_01799	0.46	-1.1
1,883,601	-		MPMX19_01799	0.46	-0.7
1,883,601	-		MPMX19_01799	0.46	-0.7
1,883,601	-		MPMX19_01799	0.46	-1.1
1,883,601	-		MPMX19_01799	0.46	-1.2
1,883,601	-		MPMX19_01799	0.46	-0.5
1,883,601	-		MPMX19_01799	0.46	+0.7
1,883,601	-		MPMX19_01799	0.46	-0.1
1,883,601	-		MPMX19_01799	0.46	-0.9
1,883,601	-		MPMX19_01799	0.46	-0.3
1,883,601	-		MPMX19_01799	0.46	-0.7
1,883,601	-		MPMX19_01799	0.46	-0.7
1,883,601	-		MPMX19_01799	0.46	-2.2
1,883,714	+		MPMX19_01799	0.72	+0.5
1,883,714	+		MPMX19_01799	0.72	-2.3
1,883,714	+		MPMX19_01799	0.72	-1.2
1,883,714	+		MPMX19_01799	0.72	-0.9
1,883,714	+		MPMX19_01799	0.72	+0.0
1,883,714	+		MPMX19_01799	0.72	-0.1
1,883,714	+		MPMX19_01799	0.72	-0.3
1,883,714	+		MPMX19_01799	0.72	-1.2
1,883,714	+		MPMX19_01799	0.72	-0.1
1,883,715	-		MPMX19_01799	0.72	-1.1
1,883,715	-		MPMX19_01799	0.72	-1.2
1,883,715	-		MPMX19_01799	0.72	-0.8
1,883,715	-		MPMX19_01799	0.72	+0.8
1,883,715	-		MPMX19_01799	0.72	+0.0
1,883,715	-		MPMX19_01799	0.72	-0.3
1,883,715	-		MPMX19_01799	0.72	-0.2
1,883,715	-		MPMX19_01799	0.72	-0.7
1,883,715	-		MPMX19_01799	0.72	+1.8
1,883,715	-		MPMX19_01799	0.72	+0.9
1,883,715	-		MPMX19_01799	0.72	-1.7
1,883,715	-		MPMX19_01799	0.72	-2.4
1,883,715	-		MPMX19_01799	0.72	-0.2
1,883,715	-		MPMX19_01799	0.72	-0.5
1,883,715	-		MPMX19_01799	0.72	-0.8
1,883,715	-		MPMX19_01799	0.72	-0.9
1,883,715	-		MPMX19_01799	0.72	+0.8
1,883,720	+		MPMX19_01799	0.74	-0.2
1,883,720	+		MPMX19_01799	0.74	-0.7
1,883,720	+		MPMX19_01799	0.74	-0.0
1,883,720	+		MPMX19_01799	0.74	+0.2
1,883,721	-		MPMX19_01799	0.74	-0.3
1,883,721	-		MPMX19_01799	0.74	+0.3
1,883,721	-		MPMX19_01799	0.74	-0.2
1,883,721	-		MPMX19_01799	0.74	+0.7
1,883,721	-		MPMX19_01799	0.74	-0.8
1,883,721	-		MPMX19_01799	0.74	-0.0
1,883,721	-		MPMX19_01799	0.74	+0.4
1,883,721	-		MPMX19_01799	0.74	+0.6
1,883,744	+		MPMX19_01799	0.79	+0.1
1,883,745	-		MPMX19_01799	0.79	-1.1
1,883,745	-		MPMX19_01799	0.79	+0.1
1,883,745	-		MPMX19_01799	0.79	-2.1
1,883,759	+		MPMX19_01799	0.83	-0.0
1,883,759	+		MPMX19_01799	0.83	+1.8
1,883,759	+		MPMX19_01799	0.83	-1.5
1,883,759	+		MPMX19_01799	0.83	-1.2
1,883,759	+		MPMX19_01799	0.83	-0.2
1,883,759	+		MPMX19_01799	0.83	-0.0
1,883,760	-		MPMX19_01799	0.83	+1.2
1,883,760	-		MPMX19_01799	0.83	+0.1
1,883,760	-		MPMX19_01799	0.83	-0.9
1,883,760	-		MPMX19_01799	0.83	-1.0
1,883,760	-		MPMX19_01799	0.83	-1.0
1,883,760	-		MPMX19_01799	0.83	-1.1
1,883,760	-		MPMX19_01799	0.83	-0.2
1,883,760	-		MPMX19_01799	0.83	-0.4
1,883,760	-		MPMX19_01799	0.83	-1.1
1,883,760	-		MPMX19_01799	0.83	-0.2
1,883,760	-		MPMX19_01799	0.83	-0.4
1,883,831	+				+0.2
1,883,831	+				-0.4
1,883,832	-				-0.9
1,883,832	-				+0.1
1,883,900	+				+0.7
1,883,900	+				-2.0
1,883,900	+				-1.1
1,883,900	+				+0.5
1,883,900	+				+0.6
1,883,900	+				-0.5
1,883,900	+				-0.2
1,883,900	+				-1.0
1,883,900	+				+0.8
1,883,900	+				-0.3
1,883,901	-				-0.3
1,883,901	-				-0.3
1,883,901	-				-1.0
1,883,901	-				-3.2
1,883,901	-				-1.4
1,883,901	-				-1.0
1,883,901	-				-0.8
1,883,901	-				+1.8
1,883,901	-				+0.0
1,883,901	-				-1.0
1,883,901	-				-2.0
1,883,901	-				+1.0
1,883,901	-				-0.1
1,883,901	-				-0.1
1,883,901	-				-0.5
1,883,901	-				-0.8
1,884,115	-		MPMX19_01801	0.14	-0.1
1,884,446	+				+0.2
1,884,446	+				+1.5
1,884,446	+				-1.5
1,884,446	+				+0.6
1,884,447	-				-0.5
1,884,447	-				+0.2
1,884,447	-				+0.6
1,884,447	-				-0.3
1,884,447	-				-0.9
1,884,447	-				-0.8
1,884,447	-				-0.0
1,884,537	+				+0.6
1,884,537	+				-0.2
1,884,537	+				-0.4
1,884,537	+				-1.2
1,884,537	+				-0.7
1,884,537	+				-1.4
1,884,537	+				-0.4
1,884,537	+				-0.1
1,884,561	+				-0.5
1,884,561	+				-0.2
1,884,561	+				-0.9
1,884,561	+				-2.0
1,884,561	+				-0.9
1,884,561	+				-0.4
1,884,561	+				-0.8
1,884,561	+				-1.9
1,884,561	+				-0.4
1,884,561	+				-0.8
1,884,561	+				-1.2
1,884,561	+				+3.1
1,884,561	+				-0.5
1,884,561	+				+0.2
1,884,561	+				-0.5
1,884,561	+				+2.1
1,884,561	+				+1.4
1,884,561	+				-0.4
1,884,561	+				+0.4
1,884,561	+				+0.8
1,884,561	+				-1.1
1,884,561	+				-0.8
1,884,561	+				-0.5
1,884,561	+				-2.4
1,884,561	+				+0.5
1,884,561	+				-0.4
1,884,561	+				+0.0
1,884,561	+				+0.9
1,884,561	+				-0.8
1,884,561	+				-1.0
1,884,561	+				-0.6
1,884,561	+				+0.2
1,884,561	+				-0.5
1,884,561	+				+0.5
1,884,561	+				-0.5
1,884,561	+				+0.8
1,884,561	+				+0.5
1,884,561	+				+0.6
1,884,561	+				+0.6
1,884,561	+				-0.8
1,884,561	+				+0.5
1,884,561	+				-1.1
1,884,561	+				-0.7
1,884,561	+				+0.6
1,884,680	+		MPMX19_01802	0.11	+0.4