Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01772

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,859,434	+		MPMX19_01772	0.15	-1.5
1,859,434	+		MPMX19_01772	0.15	+0.7
1,859,434	+		MPMX19_01772	0.15	+0.2
1,859,434	+		MPMX19_01772	0.15	+0.2
1,859,434	+		MPMX19_01772	0.15	+0.5
1,859,434	+		MPMX19_01772	0.15	+0.5
1,859,434	+		MPMX19_01772	0.15	+0.8
1,859,435	-		MPMX19_01772	0.15	-0.8
1,859,435	-		MPMX19_01772	0.15	-0.9
1,859,435	-		MPMX19_01772	0.15	-1.7
1,859,435	-		MPMX19_01772	0.15	-2.7
1,859,435	-		MPMX19_01772	0.15	-0.9
1,859,435	-		MPMX19_01772	0.15	+1.6
1,859,435	-		MPMX19_01772	0.15	-0.7
1,859,485	+		MPMX19_01772	0.20	-0.1
1,859,485	+		MPMX19_01772	0.20	+0.4
1,859,485	+		MPMX19_01772	0.20	-1.2
1,859,485	+		MPMX19_01772	0.20	-2.1
1,859,485	+		MPMX19_01772	0.20	-1.7
1,859,485	+		MPMX19_01772	0.20	-1.3
1,859,486	-		MPMX19_01772	0.20	-0.6
1,859,486	-		MPMX19_01772	0.20	-0.0
1,859,486	-		MPMX19_01772	0.20	-0.2
1,859,490	+		MPMX19_01772	0.21	+0.5
1,859,490	+		MPMX19_01772	0.21	-0.3
1,859,490	+		MPMX19_01772	0.21	-2.1
1,859,490	+		MPMX19_01772	0.21	+0.1
1,859,490	+		MPMX19_01772	0.21	-0.2
1,859,490	+		MPMX19_01772	0.21	-0.6
1,859,490	+		MPMX19_01772	0.21	-1.7
1,859,490	+		MPMX19_01772	0.21	-0.4
1,859,490	+		MPMX19_01772	0.21	+1.4
1,859,490	+		MPMX19_01772	0.21	-0.2
1,859,490	+		MPMX19_01772	0.21	-2.7
1,859,490	+		MPMX19_01772	0.21	-0.7
1,859,490	+		MPMX19_01772	0.21	-0.7
1,859,491	-		MPMX19_01772	0.21	-0.8
1,859,491	-		MPMX19_01772	0.21	-1.4
1,859,491	-		MPMX19_01772	0.21	-0.8
1,859,491	-		MPMX19_01772	0.21	+0.0
1,859,689	+		MPMX19_01772	0.42	-1.9
1,859,689	+		MPMX19_01772	0.42	-0.7
1,859,689	+		MPMX19_01772	0.42	-1.7
1,859,690	-		MPMX19_01772	0.43	+0.8
1,859,936	+		MPMX19_01772	0.69	-0.4
1,859,936	+		MPMX19_01772	0.69	-0.3
1,860,118	+		MPMX19_01772	0.89	-1.1
1,860,118	+		MPMX19_01772	0.89	-0.9
1,860,118	+		MPMX19_01772	0.89	-0.5
1,860,118	+		MPMX19_01772	0.89	-0.3
1,860,119	-		MPMX19_01772	0.89	-0.5
1,860,119	-		MPMX19_01772	0.89	-2.2
1,860,119	-		MPMX19_01772	0.89	-0.5
1,860,119	-		MPMX19_01772	0.89	+0.1
1,860,119	-		MPMX19_01772	0.89	-0.8
1,860,119	-		MPMX19_01772	0.89	-1.4
1,860,119	-		MPMX19_01772	0.89	-1.1
1,860,119	-		MPMX19_01772	0.89	+0.4
1,860,119	-		MPMX19_01772	0.89	-1.0
1,860,119	-		MPMX19_01772	0.89	+1.0
1,860,337	+				-0.4
1,860,337	+				-0.2
1,860,349	+				-0.6
1,860,349	+				-0.1
1,860,349	+				-0.4
1,860,349	+				-1.7
1,860,349	+				+0.1
1,860,350	-				-0.2
1,860,350	-				-0.2
1,860,350	-				-0.0
1,860,350	-				+1.4
1,860,350	-				+0.3
1,860,350	-				-0.4
1,860,581	+		MPMX19_01773	0.32	+0.2
1,860,581	+		MPMX19_01773	0.32	-0.4
1,860,581	+		MPMX19_01773	0.32	-0.2
1,860,581	+		MPMX19_01773	0.32	-0.3
1,860,582	-		MPMX19_01773	0.33	-0.8
1,860,582	-		MPMX19_01773	0.33	-0.6
1,860,582	-		MPMX19_01773	0.33	-0.2
1,860,582	-		MPMX19_01773	0.33	-1.1
1,860,584	+		MPMX19_01773	0.33	-0.1
1,860,710	+		MPMX19_01773	0.50	+0.8
1,860,710	+		MPMX19_01773	0.50	+1.2
1,860,710	+		MPMX19_01773	0.50	-0.9
1,860,710	+		MPMX19_01773	0.50	-0.8
1,860,710	+		MPMX19_01773	0.50	+0.2
1,860,710	+		MPMX19_01773	0.50	-0.0
1,860,710	+		MPMX19_01773	0.50	-0.4
1,860,711	-		MPMX19_01773	0.50	-1.0
1,860,711	-		MPMX19_01773	0.50	-2.8
1,860,711	-		MPMX19_01773	0.50	+0.8
1,860,711	-		MPMX19_01773	0.50	-1.3
1,860,711	-		MPMX19_01773	0.50	-0.9
1,860,711	-		MPMX19_01773	0.50	-1.7
1,860,711	-		MPMX19_01773	0.50	+0.1
1,860,711	-		MPMX19_01773	0.50	-1.4
1,860,711	-		MPMX19_01773	0.50	+1.0