Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01645

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,729,508	+		MPMX19_01643	0.75	-0.9
1,729,509	-		MPMX19_01643	0.75	-1.7
1,729,556	+		MPMX19_01643	0.80	+2.3
1,729,556	+		MPMX19_01643	0.80	-1.7
1,729,556	+		MPMX19_01643	0.80	-0.5
1,729,579	+		MPMX19_01643	0.83	-0.1
1,729,579	+		MPMX19_01643	0.83	+0.2
1,729,579	+		MPMX19_01643	0.83	+0.8
1,729,580	-		MPMX19_01643	0.83	+1.3
1,729,580	-		MPMX19_01643	0.83	+0.8
1,729,580	-		MPMX19_01643	0.83	+1.0
1,729,580	-		MPMX19_01643	0.83	-1.6
1,729,580	-		MPMX19_01643	0.83	-1.2
1,729,580	-		MPMX19_01643	0.83	+0.9
1,729,580	-		MPMX19_01643	0.83	-0.4
1,729,591	+		MPMX19_01643	0.84	+0.6
1,729,591	+		MPMX19_01643	0.84	-1.0
1,729,592	-		MPMX19_01643	0.84	-1.2
1,729,592	-		MPMX19_01643	0.84	-0.7
1,729,615	+		MPMX19_01643	0.87	-0.6
1,729,615	+		MPMX19_01643	0.87	-0.6
1,729,615	+		MPMX19_01643	0.87	-0.4
1,729,615	+		MPMX19_01643	0.87	+0.2
1,729,615	+		MPMX19_01643	0.87	-0.8
1,729,616	-		MPMX19_01643	0.87	-1.0
1,729,616	-		MPMX19_01643	0.87	+0.6
1,729,616	-		MPMX19_01643	0.87	+0.2
1,729,616	-		MPMX19_01643	0.87	-2.0
1,729,616	-		MPMX19_01643	0.87	-1.1
1,729,616	-		MPMX19_01643	0.87	+0.9
1,729,616	-		MPMX19_01643	0.87	+0.2
1,729,689	+				+1.6
1,729,863	+		MPMX19_01644	0.37	-1.4
1,729,863	+		MPMX19_01644	0.37	+0.4
1,729,863	+		MPMX19_01644	0.37	+0.8
1,729,863	+		MPMX19_01644	0.37	-2.2
1,729,863	+		MPMX19_01644	0.37	+0.4
1,729,863	+		MPMX19_01644	0.37	+0.7
1,729,863	+		MPMX19_01644	0.37	-1.3
1,729,863	+		MPMX19_01644	0.37	+2.1
1,729,863	+		MPMX19_01644	0.37	-0.6
1,729,863	+		MPMX19_01644	0.37	-0.6
1,729,863	+		MPMX19_01644	0.37	+0.2
1,729,863	+		MPMX19_01644	0.37	+0.9
1,729,863	+		MPMX19_01644	0.37	-0.0
1,729,863	+		MPMX19_01644	0.37	-0.2
1,729,863	+		MPMX19_01644	0.37	-0.2
1,729,863	+		MPMX19_01644	0.37	-0.0
1,729,863	+		MPMX19_01644	0.37	-0.8
1,729,863	+		MPMX19_01644	0.37	+0.3
1,729,863	+		MPMX19_01644	0.37	-0.5
1,729,864	-		MPMX19_01644	0.38	-0.0
1,729,864	-		MPMX19_01644	0.38	-0.7
1,729,864	-		MPMX19_01644	0.38	-0.6
1,729,864	-		MPMX19_01644	0.38	-1.2
1,729,864	-		MPMX19_01644	0.38	+0.2
1,729,864	-		MPMX19_01644	0.38	-0.1
1,729,864	-		MPMX19_01644	0.38	-1.0
1,729,864	-		MPMX19_01644	0.38	+0.7
1,729,864	-		MPMX19_01644	0.38	-0.2
1,729,864	-		MPMX19_01644	0.38	-0.7
1,729,864	-		MPMX19_01644	0.38	+0.5
1,729,864	-		MPMX19_01644	0.38	-0.6
1,729,864	-		MPMX19_01644	0.38	-1.0
1,729,864	-		MPMX19_01644	0.38	+1.3
1,729,864	-		MPMX19_01644	0.38	-0.8
1,729,864	-		MPMX19_01644	0.38	+0.3
1,729,864	-		MPMX19_01644	0.38	-0.4
1,729,864	-		MPMX19_01644	0.38	+1.3
1,729,864	-		MPMX19_01644	0.38	+0.2
1,729,864	-		MPMX19_01644	0.38	-0.0
1,729,864	-		MPMX19_01644	0.38	-0.0
1,729,864	-		MPMX19_01644	0.38	-1.8
1,729,864	-		MPMX19_01644	0.38	+0.9
1,729,864	-		MPMX19_01644	0.38	-1.7
1,729,864	-		MPMX19_01644	0.38	+0.4
1,729,864	-		MPMX19_01644	0.38	+0.1
1,729,864	-		MPMX19_01644	0.38	-1.2
1,729,864	-		MPMX19_01644	0.38	-0.2
1,729,864	-		MPMX19_01644	0.38	-0.5
1,729,869	+		MPMX19_01644	0.39	+0.2
1,729,869	+		MPMX19_01644	0.39	-1.1
1,729,869	+		MPMX19_01644	0.39	-0.2
1,729,869	+		MPMX19_01644	0.39	-1.0
1,729,870	-		MPMX19_01644	0.39	-1.0
1,730,118	+				+0.2
1,730,119	-				+0.3
1,730,119	-				+0.2
1,730,119	-				-2.1
1,730,119	-				+0.4
1,730,167	+				-1.5
1,730,167	+				-0.4
1,730,189	+				-1.4
1,730,189	+				-1.8
1,730,189	+				+1.0
1,730,189	+				-0.6
1,730,189	+				-1.5
1,730,190	-				+0.3
1,730,190	-				-0.8
1,730,190	-				-1.3
1,730,208	+				-1.6
1,730,208	+				-0.6
1,730,208	+				-0.6
1,730,208	+				-1.4
1,730,208	+				+0.3
1,730,208	+				-1.0
1,730,208	+				-2.1
1,730,208	+				-0.6
1,730,208	+				-1.5
1,730,208	+				+0.5
1,730,209	-				+0.3
1,730,209	-				+0.2
1,730,209	-				-1.0
1,730,209	-				-0.9
1,730,209	-				+0.6
1,730,209	-				-0.4
1,730,209	-				+0.7
1,730,209	-				-0.1
1,730,209	-				+0.3
1,730,209	-				-0.8
1,730,209	-				+0.0
1,730,248	+				-0.2
1,730,248	+				+2.3
1,730,248	+				-0.8
1,730,248	+				-1.1
1,730,248	+				-0.2
1,730,248	+				+0.2
1,730,248	+				-0.1
1,730,248	+				-0.9
1,730,249	-				-0.8
1,730,249	-				-1.3
1,730,249	-				-1.2
1,730,249	-				-0.8
1,730,249	-				-0.1
1,730,249	-				-0.3
1,730,249	-				-1.6
1,730,249	-				+0.8
1,730,249	-				-0.9
1,730,249	-				-1.3
1,730,249	-				-2.1
1,730,249	-				-1.7
1,730,249	-				-0.7
1,730,249	-				+0.5
1,730,265	+				+0.2
1,730,265	+				+0.6
1,730,265	+				-0.4
1,730,266	-				-0.2
1,730,266	-				-2.6
1,730,266	-				-1.2
1,730,931	+		MPMX19_01645	0.69	+1.0
1,730,931	+		MPMX19_01645	0.69	-0.8
1,730,931	+		MPMX19_01645	0.69	-1.0
1,730,932	-		MPMX19_01645	0.69	-1.4
1,730,932	-		MPMX19_01645	0.69	-0.8
1,730,932	-		MPMX19_01645	0.69	-1.0
1,731,274	+				+0.2
1,731,300	-				-0.2
1,731,587	+		MPMX19_01646	0.19	-0.1
1,731,588	-		MPMX19_01646	0.19	+0.3
1,731,626	+		MPMX19_01646	0.22	+0.8
1,731,626	+		MPMX19_01646	0.22	-0.6
1,731,626	+		MPMX19_01646	0.22	+1.3
1,731,626	+		MPMX19_01646	0.22	-1.2
1,731,626	+		MPMX19_01646	0.22	-1.0
1,731,626	+		MPMX19_01646	0.22	-0.5
1,731,626	+		MPMX19_01646	0.22	+0.2
1,731,627	-		MPMX19_01646	0.22	+1.0
1,731,627	-		MPMX19_01646	0.22	+0.2
1,731,627	-		MPMX19_01646	0.22	-1.4
1,731,627	-		MPMX19_01646	0.22	-1.2
1,731,627	-		MPMX19_01646	0.22	+0.8
1,731,627	-		MPMX19_01646	0.22	+0.6
1,731,653	+		MPMX19_01646	0.24	-0.3
1,731,653	+		MPMX19_01646	0.24	-0.8
1,731,653	+		MPMX19_01646	0.24	-2.3
1,731,653	+		MPMX19_01646	0.24	-0.2
1,731,653	+		MPMX19_01646	0.24	-0.3
1,731,654	-		MPMX19_01646	0.24	-0.2
1,731,654	-		MPMX19_01646	0.24	+1.8
1,731,677	+		MPMX19_01646	0.26	+0.1
1,731,677	+		MPMX19_01646	0.26	-0.8
1,731,677	+		MPMX19_01646	0.26	-1.0
1,731,677	+		MPMX19_01646	0.26	-0.5
1,731,677	+		MPMX19_01646	0.26	-0.0
1,731,677	+		MPMX19_01646	0.26	+0.4
1,731,677	+		MPMX19_01646	0.26	+0.0
1,731,677	+		MPMX19_01646	0.26	-0.4
1,731,677	+		MPMX19_01646	0.26	+0.2
1,731,678	-		MPMX19_01646	0.26	-1.2
1,731,678	-		MPMX19_01646	0.26	-0.4
1,731,678	-		MPMX19_01646	0.26	+0.8
1,731,678	-		MPMX19_01646	0.26	-1.0
1,731,678	-		MPMX19_01646	0.26	-0.6
1,731,678	-		MPMX19_01646	0.26	-1.0
1,731,678	-		MPMX19_01646	0.26	-0.8
1,731,678	-		MPMX19_01646	0.26	+0.7
1,731,678	-		MPMX19_01646	0.26	-0.6
1,731,678	-		MPMX19_01646	0.26	-0.2
1,731,678	-		MPMX19_01646	0.26	-1.1
1,731,678	-		MPMX19_01646	0.26	-0.1
1,731,992	+		MPMX19_01646	0.51	-0.6
1,731,993	-		MPMX19_01646	0.51	-0.4
1,731,993	-		MPMX19_01646	0.51	+0.7
1,731,993	-		MPMX19_01646	0.51	-0.7
1,731,993	-		MPMX19_01646	0.51	+0.3
1,731,993	-		MPMX19_01646	0.51	-0.8
1,732,031	+		MPMX19_01646	0.54	-0.1
1,732,031	+		MPMX19_01646	0.54	-1.2
1,732,031	+		MPMX19_01646	0.54	-1.5
1,732,031	+		MPMX19_01646	0.54	-1.6
1,732,031	+		MPMX19_01646	0.54	-1.2
1,732,031	+		MPMX19_01646	0.54	-0.8
1,732,031	+		MPMX19_01646	0.54	+2.3
1,732,031	+		MPMX19_01646	0.54	-0.4
1,732,031	+		MPMX19_01646	0.54	+0.4
1,732,031	+		MPMX19_01646	0.54	+0.7
1,732,031	+		MPMX19_01646	0.54	-0.8
1,732,031	+		MPMX19_01646	0.54	-0.5
1,732,031	+		MPMX19_01646	0.54	-0.2
1,732,031	+		MPMX19_01646	0.54	+0.8
1,732,031	+		MPMX19_01646	0.54	+0.0
1,732,031	+		MPMX19_01646	0.54	-1.5
1,732,031	+		MPMX19_01646	0.54	-1.2
1,732,031	+		MPMX19_01646	0.54	+0.8
1,732,031	+		MPMX19_01646	0.54	+1.2
1,732,031	+		MPMX19_01646	0.54	+3.3
1,732,031	+		MPMX19_01646	0.54	-0.7
1,732,031	+		MPMX19_01646	0.54	-0.7
1,732,031	+		MPMX19_01646	0.54	-0.0
1,732,031	+		MPMX19_01646	0.54	+0.2
1,732,031	+		MPMX19_01646	0.54	+0.4
1,732,031	+		MPMX19_01646	0.54	-0.0
1,732,031	+		MPMX19_01646	0.54	-1.8
1,732,031	+		MPMX19_01646	0.54	-0.3
1,732,031	+		MPMX19_01646	0.54	-1.2
1,732,031	+		MPMX19_01646	0.54	-0.2
1,732,031	+		MPMX19_01646	0.54	+0.3
1,732,031	+		MPMX19_01646	0.54	+0.2
1,732,031	+		MPMX19_01646	0.54	-0.8
1,732,031	+		MPMX19_01646	0.54	-0.8
1,732,031	+		MPMX19_01646	0.54	-0.2
1,732,031	+		MPMX19_01646	0.54	-1.2
1,732,031	+		MPMX19_01646	0.54	+0.2
1,732,031	+		MPMX19_01646	0.54	+0.3
1,732,031	+		MPMX19_01646	0.54	+0.0
1,732,031	+		MPMX19_01646	0.54	-0.1
1,732,031	+		MPMX19_01646	0.54	+0.8
1,732,032	-		MPMX19_01646	0.54	-0.6
1,732,032	-		MPMX19_01646	0.54	-1.0
1,732,032	-		MPMX19_01646	0.54	-0.6
1,732,032	-		MPMX19_01646	0.54	+0.6
1,732,032	-		MPMX19_01646	0.54	-0.1
1,732,032	-		MPMX19_01646	0.54	-0.2
1,732,032	-		MPMX19_01646	0.54	+0.4
1,732,032	-		MPMX19_01646	0.54	-1.2
1,732,032	-		MPMX19_01646	0.54	-0.2
1,732,032	-		MPMX19_01646	0.54	-0.2
1,732,032	-		MPMX19_01646	0.54	+0.9
1,732,032	-		MPMX19_01646	0.54	-0.3
1,732,032	-		MPMX19_01646	0.54	-1.0
1,732,032	-		MPMX19_01646	0.54	+1.8
1,732,032	-		MPMX19_01646	0.54	-1.2
1,732,032	-		MPMX19_01646	0.54	+1.6
1,732,032	-		MPMX19_01646	0.54	-1.4
1,732,032	-		MPMX19_01646	0.54	-0.7
1,732,032	-		MPMX19_01646	0.54	+0.5
1,732,032	-		MPMX19_01646	0.54	-0.2
1,732,032	-		MPMX19_01646	0.54	+2.1
1,732,032	-		MPMX19_01646	0.54	-0.2
1,732,032	-		MPMX19_01646	0.54	+0.4
1,732,032	-		MPMX19_01646	0.54	-0.4
1,732,032	-		MPMX19_01646	0.54	-0.7
1,732,032	-		MPMX19_01646	0.54	-0.6
1,732,032	-		MPMX19_01646	0.54	-0.6
1,732,032	-		MPMX19_01646	0.54	-0.3
1,732,032	-		MPMX19_01646	0.54	-2.0
1,732,032	-		MPMX19_01646	0.54	-2.6
1,732,032	-		MPMX19_01646	0.54	+1.2
1,732,032	-		MPMX19_01646	0.54	-0.0
1,732,032	-		MPMX19_01646	0.54	-0.5
1,732,103	+		MPMX19_01646	0.60	-1.0
1,732,104	-		MPMX19_01646	0.60	+0.1
1,732,104	-		MPMX19_01646	0.60	+0.8
1,732,184	+		MPMX19_01646	0.66	-0.0
1,732,184	+		MPMX19_01646	0.66	+0.1
1,732,184	+		MPMX19_01646	0.66	+1.3
1,732,184	+		MPMX19_01646	0.66	-1.1
1,732,184	+		MPMX19_01646	0.66	+0.0
1,732,184	+		MPMX19_01646	0.66	-0.1
1,732,184	+		MPMX19_01646	0.66	-1.5
1,732,184	+		MPMX19_01646	0.66	+0.3
1,732,184	+		MPMX19_01646	0.66	-1.0
1,732,184	+		MPMX19_01646	0.66	+0.8
1,732,184	+		MPMX19_01646	0.66	+0.8
1,732,184	+		MPMX19_01646	0.66	+0.4
1,732,184	+		MPMX19_01646	0.66	+0.8
1,732,184	+		MPMX19_01646	0.66	-2.6
1,732,184	+		MPMX19_01646	0.66	-0.5
1,732,184	+		MPMX19_01646	0.66	+0.2
1,732,184	+		MPMX19_01646	0.66	-1.0
1,732,184	+		MPMX19_01646	0.66	-0.4
1,732,184	+		MPMX19_01646	0.66	+0.3
1,732,185	-		MPMX19_01646	0.67	+0.8
1,732,185	-		MPMX19_01646	0.67	-0.4
1,732,185	-		MPMX19_01646	0.67	+0.7
1,732,185	-		MPMX19_01646	0.67	-1.2
1,732,185	-		MPMX19_01646	0.67	-0.6
1,732,185	-		MPMX19_01646	0.67	-0.4
1,732,185	-		MPMX19_01646	0.67	-0.7
1,732,185	-		MPMX19_01646	0.67	+1.3
1,732,185	-		MPMX19_01646	0.67	-1.2
1,732,223	+		MPMX19_01646	0.70	+0.6
1,732,223	+		MPMX19_01646	0.70	-1.0
1,732,224	-		MPMX19_01646	0.70	-0.0
1,732,224	-		MPMX19_01646	0.70	-1.2
1,732,224	-		MPMX19_01646	0.70	-2.6
1,732,224	-		MPMX19_01646	0.70	+0.5
1,732,224	-		MPMX19_01646	0.70	+0.1
1,732,224	-		MPMX19_01646	0.70	-2.4