Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01598

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,672,055	+		MPMX19_01596	0.86	-0.6
1,672,055	+		MPMX19_01596	0.86	+0.8
1,672,055	+		MPMX19_01596	0.86	-0.5
1,672,055	+		MPMX19_01596	0.86	+0.5
1,672,055	+		MPMX19_01596	0.86	+0.3
1,672,055	+		MPMX19_01596	0.86	-0.6
1,672,056	-		MPMX19_01596	0.86	-0.2
1,672,056	-		MPMX19_01596	0.86	+0.8
1,672,056	-		MPMX19_01596	0.86	-1.7
1,672,056	-		MPMX19_01596	0.86	+0.2
1,672,150	+				-0.8
1,672,150	+				-0.2
1,672,150	+				-1.2
1,672,150	+				-0.4
1,672,150	+				-0.3
1,672,150	+				+0.8
1,672,151	-				-0.4
1,672,151	-				-2.1
1,672,151	-				-1.1
1,672,151	-				-0.5
1,672,377	+		MPMX19_01597	0.25	+1.3
1,672,377	+		MPMX19_01597	0.25	-0.8
1,672,377	+		MPMX19_01597	0.25	-1.2
1,672,377	+		MPMX19_01597	0.25	-0.8
1,672,378	-		MPMX19_01597	0.25	-0.6
1,672,742	+		MPMX19_01597	0.73	+0.0
1,672,743	-		MPMX19_01597	0.73	-1.2
1,672,743	-		MPMX19_01597	0.73	-2.3
1,672,931	+				-1.1
1,672,932	-				-0.4
1,672,932	-				-1.2
1,672,932	-				-0.2
1,672,932	-				-0.1
1,672,950	-				-0.6
1,672,994	+				-1.6
1,673,099	+				+1.4
1,673,099	+				-0.2
1,673,404	+		MPMX19_01598	0.16	-1.5
1,673,404	+		MPMX19_01598	0.16	-0.7
1,673,404	+		MPMX19_01598	0.16	+0.7
1,673,404	+		MPMX19_01598	0.16	+0.4
1,673,405	-		MPMX19_01598	0.16	-0.9
1,673,459	+		MPMX19_01598	0.18	-0.4
1,673,459	+		MPMX19_01598	0.18	+0.2
1,673,459	+		MPMX19_01598	0.18	-2.1
1,673,459	+		MPMX19_01598	0.18	+1.1
1,673,459	+		MPMX19_01598	0.18	-0.7
1,673,459	+		MPMX19_01598	0.18	-0.2
1,673,459	+		MPMX19_01598	0.18	+0.6
1,673,459	+		MPMX19_01598	0.18	-1.5
1,673,459	+		MPMX19_01598	0.18	-0.4
1,673,459	+		MPMX19_01598	0.18	-0.1
1,673,459	+		MPMX19_01598	0.18	+0.2
1,673,459	+		MPMX19_01598	0.18	-1.3
1,673,459	+		MPMX19_01598	0.18	-0.5
1,673,460	-		MPMX19_01598	0.18	-1.6
1,673,460	-		MPMX19_01598	0.18	+0.5
1,673,460	-		MPMX19_01598	0.18	+0.1
1,673,460	-		MPMX19_01598	0.18	-0.1
1,673,460	-		MPMX19_01598	0.18	+0.3
1,673,460	-		MPMX19_01598	0.18	+0.4
1,673,460	-		MPMX19_01598	0.18	-0.6
1,673,460	-		MPMX19_01598	0.18	-0.3
1,673,460	-		MPMX19_01598	0.18	-0.2
1,673,460	-		MPMX19_01598	0.18	-0.7
1,673,460	-		MPMX19_01598	0.18	+0.2
1,673,460	-		MPMX19_01598	0.18	+0.8
1,673,460	-		MPMX19_01598	0.18	+0.5
1,673,460	-		MPMX19_01598	0.18	-0.4
1,673,460	-		MPMX19_01598	0.18	-0.7
1,673,648	+		MPMX19_01598	0.26	-2.3
1,673,648	+		MPMX19_01598	0.26	-1.8
1,673,648	+		MPMX19_01598	0.26	-0.7
1,673,648	+		MPMX19_01598	0.26	-1.4
1,673,649	-		MPMX19_01598	0.26	-0.2
1,673,649	-		MPMX19_01598	0.26	-0.9
1,673,649	-		MPMX19_01598	0.26	-0.7
1,673,649	-		MPMX19_01598	0.26	+1.3
1,673,649	-		MPMX19_01598	0.26	+0.3
1,673,649	-		MPMX19_01598	0.26	-1.7
1,673,649	-		MPMX19_01598	0.26	-0.4
1,673,765	+		MPMX19_01598	0.30	-0.1
1,673,765	+		MPMX19_01598	0.30	+0.2
1,673,765	+		MPMX19_01598	0.30	+0.2
1,673,765	+		MPMX19_01598	0.30	+0.8
1,673,765	+		MPMX19_01598	0.30	-1.1
1,673,765	+		MPMX19_01598	0.30	+0.6
1,673,765	+		MPMX19_01598	0.30	-1.3
1,673,765	+		MPMX19_01598	0.30	-0.9
1,673,765	+		MPMX19_01598	0.30	+0.9
1,673,765	+		MPMX19_01598	0.30	+0.8
1,673,765	+		MPMX19_01598	0.30	+0.9
1,673,766	-		MPMX19_01598	0.30	+0.8
1,673,766	-		MPMX19_01598	0.30	+0.2
1,673,766	-		MPMX19_01598	0.30	-0.1
1,673,766	-		MPMX19_01598	0.30	-2.2
1,673,766	-		MPMX19_01598	0.30	-0.7
1,674,179	+		MPMX19_01598	0.47	+0.5
1,674,179	+		MPMX19_01598	0.47	-0.3
1,674,179	+		MPMX19_01598	0.47	-0.5
1,674,179	+		MPMX19_01598	0.47	-1.8
1,674,179	+		MPMX19_01598	0.47	-0.1
1,674,180	-		MPMX19_01598	0.47	-1.4
1,674,180	-		MPMX19_01598	0.47	-0.2
1,674,180	-		MPMX19_01598	0.47	-1.6
1,674,180	-		MPMX19_01598	0.47	-2.4
1,674,180	-		MPMX19_01598	0.47	-0.5
1,674,251	+		MPMX19_01598	0.49	+0.5
1,674,252	-		MPMX19_01598	0.49	+0.5
1,674,252	-		MPMX19_01598	0.49	-1.2
1,674,353	+		MPMX19_01598	0.53	+0.8
1,674,353	+		MPMX19_01598	0.53	-0.7
1,674,353	+		MPMX19_01598	0.53	+0.0
1,674,353	+		MPMX19_01598	0.53	-0.2
1,674,353	+		MPMX19_01598	0.53	-0.8
1,674,353	+		MPMX19_01598	0.53	-0.6
1,674,353	+		MPMX19_01598	0.53	-1.1
1,674,353	+		MPMX19_01598	0.53	+0.6
1,674,353	+		MPMX19_01598	0.53	+1.3
1,674,353	+		MPMX19_01598	0.53	+1.1
1,674,353	+		MPMX19_01598	0.53	-0.7
1,674,354	-		MPMX19_01598	0.53	-0.6
1,674,354	-		MPMX19_01598	0.53	+0.5
1,674,354	-		MPMX19_01598	0.53	+1.0
1,674,354	-		MPMX19_01598	0.53	-0.1
1,674,354	-		MPMX19_01598	0.53	+1.8
1,674,354	-		MPMX19_01598	0.53	+0.5
1,674,432	+		MPMX19_01598	0.56	-0.8
1,674,432	+		MPMX19_01598	0.56	-0.2
1,674,432	+		MPMX19_01598	0.56	-1.0
1,674,432	+		MPMX19_01598	0.56	-2.1
1,674,432	+		MPMX19_01598	0.56	-1.6
1,674,432	+		MPMX19_01598	0.56	+0.4
1,674,432	+		MPMX19_01598	0.56	-0.2
1,674,432	+		MPMX19_01598	0.56	+0.1
1,674,432	+		MPMX19_01598	0.56	+0.8
1,674,432	+		MPMX19_01598	0.56	-0.6
1,674,433	-		MPMX19_01598	0.56	-0.9
1,674,433	-		MPMX19_01598	0.56	-0.3
1,674,433	-		MPMX19_01598	0.56	-1.8
1,674,433	-		MPMX19_01598	0.56	-1.1
1,674,433	-		MPMX19_01598	0.56	-1.6
1,674,433	-		MPMX19_01598	0.56	-1.8
1,674,433	-		MPMX19_01598	0.56	+0.5
1,674,776	+		MPMX19_01598	0.70	+1.6
1,674,776	+		MPMX19_01598	0.70	+1.0
1,674,777	-		MPMX19_01598	0.70	-0.7
1,674,777	-		MPMX19_01598	0.70	+0.1
1,674,777	-		MPMX19_01598	0.70	-1.6
1,674,777	-		MPMX19_01598	0.70	-0.4
1,674,777	-		MPMX19_01598	0.70	-1.5
1,674,777	-		MPMX19_01598	0.70	+1.2
1,674,914	+		MPMX19_01598	0.75	+0.5
1,674,914	+		MPMX19_01598	0.75	+0.7
1,674,914	+		MPMX19_01598	0.75	-0.2
1,674,914	+		MPMX19_01598	0.75	+0.5
1,674,914	+		MPMX19_01598	0.75	-2.1
1,674,914	+		MPMX19_01598	0.75	-0.2
1,674,914	+		MPMX19_01598	0.75	+0.8
1,674,914	+		MPMX19_01598	0.75	-1.2
1,674,915	-		MPMX19_01598	0.75	-0.2
1,674,915	-		MPMX19_01598	0.75	+0.9
1,674,915	-		MPMX19_01598	0.75	-1.4
1,674,915	-		MPMX19_01598	0.75	-0.8
1,674,915	-		MPMX19_01598	0.75	+0.1
1,674,915	-		MPMX19_01598	0.75	-1.8
1,674,915	-		MPMX19_01598	0.75	-0.7
1,674,915	-		MPMX19_01598	0.75	-0.6
1,674,953	+		MPMX19_01598	0.77	+0.9
1,675,034	+		MPMX19_01598	0.80	-0.5
1,675,034	+		MPMX19_01598	0.80	+0.4
1,675,034	+		MPMX19_01598	0.80	-0.5
1,675,034	+		MPMX19_01598	0.80	+0.5
1,675,034	+		MPMX19_01598	0.80	-1.6
1,675,035	-		MPMX19_01598	0.80	+0.2
1,675,035	-		MPMX19_01598	0.80	-1.0
1,675,035	-		MPMX19_01598	0.80	+1.4
1,675,035	-		MPMX19_01598	0.80	+0.9
1,675,035	-		MPMX19_01598	0.80	-2.1
1,675,035	-		MPMX19_01598	0.80	-0.8
1,675,381	+				+0.9
1,675,381	+				-0.4
1,675,381	+				-0.0
1,675,382	-				-0.9
1,675,382	-				+0.4
1,675,467	+				-0.4
1,675,468	-				+0.2
1,675,524	+				+1.8
1,675,524	+				-1.5
1,675,524	+				-0.1
1,675,524	+				-0.2
1,675,525	-				-2.1
1,675,525	-				+0.5
1,675,632	+				+0.2
1,675,633	-				-0.9
1,675,633	-				-0.8
1,675,633	-				-0.7
1,675,672	-				-1.2
1,675,684	+				+0.9
1,675,684	+				-1.4
1,675,684	+				+0.9
1,675,684	+				-1.6
1,675,684	+				+0.8
1,675,684	+				+0.2
1,675,684	+				-1.6
1,675,684	+				-0.8
1,675,684	+				-1.5
1,675,685	-				-0.9
1,675,685	-				-0.2
1,675,685	-				+0.4
1,675,685	-				-1.4
1,675,685	-				+1.0
1,675,685	-				+1.8
1,675,685	-				-1.5
1,675,685	-				-1.4
1,675,698	+				-0.8
1,675,703	+				-1.4
1,675,704	-				+0.4
1,675,708	+				-0.7
1,675,708	+				-0.9
1,675,708	+				-0.2
1,675,708	+				+0.4
1,675,708	+				-0.2
1,675,708	+				-1.9
1,675,708	+				+0.2
1,675,708	+				+0.1
1,675,708	+				-0.7
1,675,709	-				-0.2
1,675,709	-				+1.5
1,675,709	-				+0.4
1,675,709	-				-0.9
1,675,709	-				-1.2
1,675,714	-				-2.2
1,675,740	+				-0.8
1,675,740	+				-2.1
1,675,740	+				-1.1
1,675,740	+				+0.8
1,675,740	+				-0.1
1,675,741	-				-1.3
1,675,741	-				+0.5
1,675,741	-				-1.3
1,675,741	-				-0.6
1,675,809	+				-0.8
1,675,810	-				+1.1
1,675,810	-				+0.6
1,676,024	+		MPMX19_01599	0.14	-0.4
1,676,024	+		MPMX19_01599	0.14	-0.4
1,676,024	+		MPMX19_01599	0.14	-1.1
1,676,024	+		MPMX19_01599	0.14	-0.0
1,676,024	+		MPMX19_01599	0.14	-1.1
1,676,024	+		MPMX19_01599	0.14	-0.2
1,676,024	+		MPMX19_01599	0.14	-1.1
1,676,024	+		MPMX19_01599	0.14	+1.2
1,676,024	+		MPMX19_01599	0.14	-0.5
1,676,024	+		MPMX19_01599	0.14	-0.5
1,676,024	+		MPMX19_01599	0.14	-0.3
1,676,025	-		MPMX19_01599	0.14	+0.9
1,676,025	-		MPMX19_01599	0.14	+0.6
1,676,025	-		MPMX19_01599	0.14	-1.2
1,676,025	-		MPMX19_01599	0.14	-1.4
1,676,025	-		MPMX19_01599	0.14	-1.7
1,676,025	-		MPMX19_01599	0.14	+0.8
1,676,082	+		MPMX19_01599	0.24	-1.1
1,676,082	+		MPMX19_01599	0.24	-1.0
1,676,083	-		MPMX19_01599	0.24	+1.8
1,676,083	-		MPMX19_01599	0.24	+0.2
1,676,096	+		MPMX19_01599	0.26	-1.6
1,676,096	+		MPMX19_01599	0.26	-0.7
1,676,096	+		MPMX19_01599	0.26	-0.1
1,676,096	+		MPMX19_01599	0.26	-1.2
1,676,096	+		MPMX19_01599	0.26	+0.2
1,676,096	+		MPMX19_01599	0.26	-1.4
1,676,096	+		MPMX19_01599	0.26	+0.5
1,676,096	+		MPMX19_01599	0.26	-1.4
1,676,096	+		MPMX19_01599	0.26	+0.9
1,676,096	+		MPMX19_01599	0.26	+0.9
1,676,096	+		MPMX19_01599	0.26	-0.0
1,676,096	+		MPMX19_01599	0.26	+0.8
1,676,096	+		MPMX19_01599	0.26	+0.6
1,676,096	+		MPMX19_01599	0.26	-1.2
1,676,096	+		MPMX19_01599	0.26	-0.4
1,676,097	-		MPMX19_01599	0.26	-1.1
1,676,097	-		MPMX19_01599	0.26	+0.3
1,676,097	-		MPMX19_01599	0.26	+0.8
1,676,097	-		MPMX19_01599	0.26	+0.4
1,676,097	-		MPMX19_01599	0.26	+0.2
1,676,097	-		MPMX19_01599	0.26	-0.2
1,676,097	-		MPMX19_01599	0.26	+0.7
1,676,097	-		MPMX19_01599	0.26	+0.4
1,676,097	-		MPMX19_01599	0.26	+0.5
1,676,097	-		MPMX19_01599	0.26	-0.3
1,676,129	+		MPMX19_01599	0.31	-0.0
1,676,129	+		MPMX19_01599	0.31	-0.7
1,676,129	+		MPMX19_01599	0.31	+1.3
1,676,130	-		MPMX19_01599	0.31	-0.2
1,676,130	-		MPMX19_01599	0.31	-1.2
1,676,130	-		MPMX19_01599	0.31	+0.2
1,676,130	-		MPMX19_01599	0.31	-0.9
1,676,130	-		MPMX19_01599	0.31	+0.8
1,676,183	+		MPMX19_01599	0.40	-2.1
1,676,183	+		MPMX19_01599	0.40	-0.5
1,676,183	+		MPMX19_01599	0.40	-0.8
1,676,183	+		MPMX19_01599	0.40	-0.6
1,676,183	+		MPMX19_01599	0.40	-0.6
1,676,184	-		MPMX19_01599	0.40	+0.5
1,676,184	-		MPMX19_01599	0.40	-0.1
1,676,184	-		MPMX19_01599	0.40	-0.4
1,676,184	-		MPMX19_01599	0.40	-0.3
1,676,184	-		MPMX19_01599	0.40	-0.6
1,676,184	-		MPMX19_01599	0.40	+0.4
1,676,519	+				-1.2
1,676,519	+				-0.5
1,676,519	+				-0.4
1,676,519	+				+1.2
1,676,519	+				-0.2
1,676,519	+				+0.1
1,676,519	+				+1.0
1,676,519	+				-0.1
1,676,519	+				-1.2
1,676,519	+				-0.8
1,676,520	-				-1.3
1,676,520	-				+0.3
1,676,520	-				-0.1
1,676,520	-				+0.7
1,676,520	-				-0.2
1,676,520	-				-1.6
1,676,520	-				-0.2
1,676,520	-				-0.3
1,676,520	-				+0.2
1,676,520	-				-0.6
1,676,520	-				+0.4