Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01586

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,658,236	+		MPMX19_01584	0.86	-1.6
1,658,236	+		MPMX19_01584	0.86	-0.6
1,658,236	+		MPMX19_01584	0.86	+0.2
1,658,236	+		MPMX19_01584	0.86	-1.3
1,658,236	+		MPMX19_01584	0.86	-1.0
1,658,237	-		MPMX19_01584	0.86	-0.8
1,658,237	-		MPMX19_01584	0.86	-1.5
1,658,237	-		MPMX19_01584	0.86	+0.7
1,658,237	-		MPMX19_01584	0.86	-2.2
1,658,237	-		MPMX19_01584	0.86	-1.1
1,658,237	-		MPMX19_01584	0.86	+0.4
1,658,237	-		MPMX19_01584	0.86	-1.4
1,658,237	-		MPMX19_01584	0.86	-1.2
1,658,237	-		MPMX19_01584	0.86	-0.2
1,658,237	-		MPMX19_01584	0.86	-2.0
1,658,237	-		MPMX19_01584	0.86	+1.2
1,658,237	-		MPMX19_01584	0.86	-0.9
1,658,237	-		MPMX19_01584	0.86	-1.3
1,658,237	-		MPMX19_01584	0.86	-0.4
1,658,237	-		MPMX19_01584	0.86	-1.0
1,658,248	+		MPMX19_01584	0.87	-0.5
1,658,248	+		MPMX19_01584	0.87	-2.1
1,658,248	+		MPMX19_01584	0.87	-0.4
1,658,248	+		MPMX19_01584	0.87	+0.2
1,658,248	+		MPMX19_01584	0.87	-1.4
1,658,248	+		MPMX19_01584	0.87	-0.6
1,658,249	-		MPMX19_01584	0.87	+0.2
1,658,249	-		MPMX19_01584	0.87	-2.2
1,658,249	-		MPMX19_01584	0.87	-1.4
1,658,249	-		MPMX19_01584	0.87	-0.7
1,658,249	-		MPMX19_01584	0.87	-0.6
1,658,249	-		MPMX19_01584	0.87	-0.7
1,658,350	+				-0.0
1,658,351	-				+0.4
1,658,404	+				-0.1
1,658,404	+				-1.3
1,658,404	+				-1.6
1,658,404	+				-1.3
1,658,404	+				-1.6
1,658,404	+				-0.5
1,658,404	+				-0.8
1,658,404	+				-1.1
1,658,404	+				-2.7
1,658,404	+				+0.1
1,658,404	+				-0.1
1,658,405	-				-0.1
1,658,405	-				-1.5
1,658,405	-				-0.9
1,658,405	-				-1.1
1,658,405	-				+0.0
1,658,405	-				-0.3
1,658,405	-				-1.2
1,658,405	-				+0.6
1,658,501	-				+0.0
1,658,706	+				+1.3
1,658,739	+				-1.3
1,658,739	+				+0.1
1,658,739	+				-0.8
1,658,739	+				-0.8
1,658,739	+				+1.2
1,658,739	+				-0.9
1,658,740	-				+1.3
1,658,740	-				-0.5
1,658,740	-				-0.3
1,658,740	-				-0.7
1,658,740	-				-1.6
1,658,740	-				-1.4
1,658,740	-				+0.4
1,658,740	-				-0.6
1,658,740	-				-1.3
1,658,866	+		MPMX19_01585	0.31	+0.5
1,658,867	-		MPMX19_01585	0.31	-0.6
1,658,867	-		MPMX19_01585	0.31	-0.6
1,658,926	+		MPMX19_01585	0.44	-0.7
1,658,926	+		MPMX19_01585	0.44	+1.9
1,658,926	+		MPMX19_01585	0.44	-1.7
1,658,989	+		MPMX19_01585	0.57	+0.4
1,658,989	+		MPMX19_01585	0.57	-0.5
1,658,989	+		MPMX19_01585	0.57	-0.9
1,658,989	+		MPMX19_01585	0.57	-2.4
1,658,990	-		MPMX19_01585	0.58	-0.1
1,659,816	+		MPMX19_01586	0.54	-1.3
1,659,816	+		MPMX19_01586	0.54	-1.4
1,659,816	+		MPMX19_01586	0.54	-1.3
1,659,816	+		MPMX19_01586	0.54	-1.8
1,659,816	+		MPMX19_01586	0.54	+0.6
1,659,816	+		MPMX19_01586	0.54	-2.2
1,659,816	+		MPMX19_01586	0.54	-0.8
1,659,816	+		MPMX19_01586	0.54	-2.3
1,659,816	+		MPMX19_01586	0.54	-0.8
1,659,817	-		MPMX19_01586	0.54	+0.9
1,659,817	-		MPMX19_01586	0.54	-0.1
1,659,870	+		MPMX19_01586	0.58	-1.3
1,659,871	-		MPMX19_01586	0.59	-0.3
1,659,871	-		MPMX19_01586	0.59	-0.6
1,660,353	+				-1.3
1,660,353	+				+0.3
1,660,353	+				+1.2
1,660,353	+				+0.5
1,660,353	+				-1.3
1,660,353	+				-1.0
1,660,354	-				-0.1
1,660,354	-				-1.4
1,660,354	-				-0.3
1,660,354	-				+0.3
1,660,354	-				+0.0
1,660,354	-				+1.1
1,660,354	-				+0.1
1,660,354	-				-0.7
1,660,354	-				+2.3
1,660,409	+				-1.0
1,660,409	+				-1.6
1,660,409	+				-0.8
1,660,409	+				-0.8
1,660,409	+				+0.3
1,660,409	+				-0.3
1,660,409	+				-0.6
1,660,409	+				-0.2
1,660,409	+				-1.4
1,660,410	-				-1.8
1,660,410	-				-1.4
1,660,410	-				+0.5
1,660,410	-				-0.3
1,660,410	-				-1.0
1,660,410	-				+0.4
1,660,410	-				-1.9
1,660,410	-				-1.3
1,660,410	-				-0.6
1,660,410	-				+0.2
1,660,410	-				-0.8
1,660,410	-				-0.8
1,660,410	-				-0.8
1,660,410	-				+0.3
1,660,508	+				+1.2
1,660,508	+				+0.2
1,660,509	-				+0.3
1,660,509	-				-1.1
1,660,827	+		MPMX19_01587	0.21	-0.6
1,660,934	-		MPMX19_01587	0.27	+0.6
1,660,934	-		MPMX19_01587	0.27	+0.7
1,661,018	+		MPMX19_01587	0.31	+1.7
1,661,018	+		MPMX19_01587	0.31	+0.7
1,661,018	+		MPMX19_01587	0.31	+0.6
1,661,018	+		MPMX19_01587	0.31	-1.3
1,661,018	+		MPMX19_01587	0.31	+0.5
1,661,019	-		MPMX19_01587	0.31	-1.6
1,661,019	-		MPMX19_01587	0.31	-1.8
1,661,019	-		MPMX19_01587	0.31	-1.2
1,661,019	-		MPMX19_01587	0.31	-0.1
1,661,019	-		MPMX19_01587	0.31	+0.4
1,661,019	-		MPMX19_01587	0.31	+0.1
1,661,019	-		MPMX19_01587	0.31	-0.6
1,661,019	-		MPMX19_01587	0.31	+1.2
1,661,019	-		MPMX19_01587	0.31	+1.1
1,661,295	-		MPMX19_01587	0.45	-1.6
1,661,295	-		MPMX19_01587	0.45	-0.4
1,661,295	-		MPMX19_01587	0.45	+0.9