Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01563

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,640,878	+				+0.7
1,640,878	+				-1.6
1,640,878	+				-3.6
1,640,878	+				-0.8
1,640,878	+				-0.8
1,640,878	+				-0.8
1,640,879	-				-1.5
1,640,879	-				+0.2
1,640,919	-				-1.0
1,640,919	-				+0.4
1,640,919	-				-0.6
1,640,921	-				-0.9
1,640,921	-				+1.0
1,640,921	-				-0.6
1,640,921	-				-2.8
1,640,921	-				-1.1
1,640,921	-				+0.9
1,640,921	-				-0.1
1,640,921	-				-0.2
1,640,921	-				-0.0
1,640,921	-				-2.2
1,640,921	-				+0.2
1,640,921	-				+0.5
1,640,921	-				-1.4
1,640,921	-				+1.3
1,640,921	-				-1.0
1,640,921	-				-1.6
1,640,921	-				-3.1
1,640,921	-				-0.4
1,640,921	-				-0.4
1,640,921	-				-1.8
1,640,921	-				-1.6
1,640,921	-				-0.2
1,640,921	-				-2.1
1,640,921	-				-2.0
1,640,921	-				+0.3
1,640,921	-				-1.4
1,640,921	-				-1.1
1,640,921	-				-0.7
1,640,921	-				+0.0
1,640,921	-				-1.4
1,640,921	-				-0.1
1,640,921	-				+0.7
1,640,921	-				-0.3
1,640,921	-				-0.2
1,640,931	-				+0.4
1,641,766	+				+0.6
1,641,766	+				-2.0
1,641,766	+				-0.4
1,641,766	+				-0.1
1,641,766	+				-0.5
1,641,766	+				-0.4
1,641,766	+				-0.2
1,641,775	+				-1.8
1,641,775	+				-1.8
1,641,775	+				+0.3
1,641,775	+				-0.1
1,641,775	+				-1.3
1,641,775	+				-1.5
1,641,775	+				-1.2
1,641,880	+		MPMX19_01563	0.12	-1.3
1,641,880	+		MPMX19_01563	0.12	+0.2
1,641,881	-		MPMX19_01563	0.12	-1.0
1,641,881	-		MPMX19_01563	0.12	-0.7
1,641,881	-		MPMX19_01563	0.12	-1.3
1,641,881	-		MPMX19_01563	0.12	-2.2
1,642,034	+		MPMX19_01563	0.28	-0.1
1,642,034	+		MPMX19_01563	0.28	-1.7
1,642,034	+		MPMX19_01563	0.28	-1.6
1,642,034	+		MPMX19_01563	0.28	-0.6
1,642,034	+		MPMX19_01563	0.28	-0.7
1,642,035	-		MPMX19_01563	0.28	-0.3
1,642,035	-		MPMX19_01563	0.28	-0.7
1,642,035	-		MPMX19_01563	0.28	+0.7
1,642,035	-		MPMX19_01563	0.28	-0.7
1,642,075	+		MPMX19_01563	0.33	-0.7
1,642,075	+		MPMX19_01563	0.33	-1.1
1,642,076	-		MPMX19_01563	0.33	-0.6
1,642,076	-		MPMX19_01563	0.33	+1.3
1,642,134	+		MPMX19_01563	0.39	-0.8
1,642,189	+		MPMX19_01563	0.45	-0.4
1,642,190	-		MPMX19_01563	0.45	-1.3
1,642,190	-		MPMX19_01563	0.45	-0.3
1,642,190	-		MPMX19_01563	0.45	-0.6
1,642,190	-		MPMX19_01563	0.45	-1.0
1,642,190	-		MPMX19_01563	0.45	-0.4
1,642,267	+		MPMX19_01563	0.54	-0.0
1,642,267	+		MPMX19_01563	0.54	-0.6
1,642,267	+		MPMX19_01563	0.54	-1.7
1,642,267	+		MPMX19_01563	0.54	+0.0
1,642,267	+		MPMX19_01563	0.54	-1.3
1,642,267	+		MPMX19_01563	0.54	+0.7
1,642,267	+		MPMX19_01563	0.54	-1.0
1,642,267	+		MPMX19_01563	0.54	+0.4
1,642,267	+		MPMX19_01563	0.54	-0.4
1,642,267	+		MPMX19_01563	0.54	-1.9
1,642,268	-		MPMX19_01563	0.54	-0.3
1,642,268	-		MPMX19_01563	0.54	-2.1
1,642,268	-		MPMX19_01563	0.54	-1.4
1,642,268	-		MPMX19_01563	0.54	-0.5
1,642,268	-		MPMX19_01563	0.54	+0.7
1,642,268	-		MPMX19_01563	0.54	-0.5
1,642,342	+		MPMX19_01563	0.62	-0.2
1,642,342	+		MPMX19_01563	0.62	-0.3
1,642,342	+		MPMX19_01563	0.62	-0.1
1,642,342	+		MPMX19_01563	0.62	-0.3
1,642,342	+		MPMX19_01563	0.62	-1.2
1,642,342	+		MPMX19_01563	0.62	-0.4
1,642,342	+		MPMX19_01563	0.62	+0.5
1,642,343	-		MPMX19_01563	0.62	-1.6
1,642,343	-		MPMX19_01563	0.62	-2.5
1,642,343	-		MPMX19_01563	0.62	+0.9
1,642,343	-		MPMX19_01563	0.62	-1.5
1,642,343	-		MPMX19_01563	0.62	+0.7
1,642,343	-		MPMX19_01563	0.62	-0.9
1,642,343	-		MPMX19_01563	0.62	-2.4
1,642,441	+		MPMX19_01563	0.73	-1.3
1,642,441	+		MPMX19_01563	0.73	-1.3
1,642,441	+		MPMX19_01563	0.73	+0.4
1,642,441	+		MPMX19_01563	0.73	-0.1
1,642,441	+		MPMX19_01563	0.73	-0.7
1,642,441	+		MPMX19_01563	0.73	-0.1
1,642,441	+		MPMX19_01563	0.73	-0.7
1,642,441	+		MPMX19_01563	0.73	-0.1
1,642,441	+		MPMX19_01563	0.73	-0.2
1,642,441	+		MPMX19_01563	0.73	-1.1
1,642,442	-		MPMX19_01563	0.73	-0.6
1,642,442	-		MPMX19_01563	0.73	-0.8
1,642,442	-		MPMX19_01563	0.73	-0.6
1,642,442	-		MPMX19_01563	0.73	-1.1
1,642,442	-		MPMX19_01563	0.73	+0.9
1,642,442	-		MPMX19_01563	0.73	+2.1
1,642,442	-		MPMX19_01563	0.73	+0.2
1,642,442	-		MPMX19_01563	0.73	-0.6
1,642,442	-		MPMX19_01563	0.73	+0.4
1,642,442	-		MPMX19_01563	0.73	+0.3
1,642,442	-		MPMX19_01563	0.73	-0.7
1,642,442	-		MPMX19_01563	0.73	+0.5
1,642,661	+				-0.0
1,642,661	+				-0.4
1,642,662	-				-1.6
1,642,662	-				+1.4
1,642,781	+				-0.7
1,642,781	+				-0.6
1,642,781	+				-1.4
1,642,782	-				-0.7
1,642,795	-				-1.1
1,642,812	-				+0.6
1,642,869	-				-1.0
1,642,877	+				-0.7
1,642,877	+				-0.1
1,642,877	+				+0.2
1,642,877	+				-0.7
1,642,878	-				-2.0
1,642,880	+				-0.1
1,642,880	+				-1.4
1,643,119	+		MPMX19_01564	0.62	+1.7
1,643,120	-		MPMX19_01564	0.62	+0.7
1,643,120	-		MPMX19_01564	0.62	-1.5
1,643,120	-		MPMX19_01564	0.62	-0.7
1,643,158	+		MPMX19_01564	0.75	-0.3
1,643,158	+		MPMX19_01564	0.75	-0.8
1,643,158	+		MPMX19_01564	0.75	-0.8
1,643,158	+		MPMX19_01564	0.75	+0.5
1,643,159	-		MPMX19_01564	0.75	-1.4
1,643,159	-		MPMX19_01564	0.75	+0.6
1,643,159	-		MPMX19_01564	0.75	-0.1
1,643,159	-		MPMX19_01564	0.75	-1.2
1,643,159	-		MPMX19_01564	0.75	-1.1
1,643,159	-		MPMX19_01564	0.75	+3.2
1,643,159	-		MPMX19_01564	0.75	-0.0
1,643,167	+		MPMX19_01564	0.78	-0.8
1,643,167	+		MPMX19_01564	0.78	-0.1
1,643,167	+		MPMX19_01564	0.78	+0.7
1,643,167	+		MPMX19_01564	0.78	+0.4
1,643,167	+		MPMX19_01564	0.78	-1.1
1,643,167	+		MPMX19_01564	0.78	-0.3
1,643,168	-		MPMX19_01564	0.78	-2.1
1,643,168	-		MPMX19_01564	0.78	+0.2
1,643,168	-		MPMX19_01564	0.78	-0.0
1,643,168	-		MPMX19_01564	0.78	-0.1
1,643,168	-		MPMX19_01564	0.78	-0.4
1,643,168	-		MPMX19_01564	0.78	-1.8
1,643,168	-		MPMX19_01564	0.78	+0.1
1,643,168	-		MPMX19_01564	0.78	-1.7
1,643,168	-		MPMX19_01564	0.78	+0.8
1,643,168	-		MPMX19_01564	0.78	+0.2
1,643,168	-		MPMX19_01564	0.78	-0.1
1,643,168	-		MPMX19_01564	0.78	-1.0
1,643,168	-		MPMX19_01564	0.78	-0.7
1,643,235	+				-0.9
1,643,235	+				-1.1
1,643,235	+				-2.0
1,643,235	+				+0.7
1,643,235	+				-0.4
1,643,235	+				-1.2
1,643,235	+				-1.1
1,643,235	+				-1.7
1,643,235	+				+2.3
1,643,235	+				+0.3
1,643,235	+				-0.6
1,643,236	-				+0.4
1,643,236	-				-0.4
1,643,236	-				-0.6
1,643,236	-				+0.2
1,643,236	-				-1.7
1,643,236	-				-0.2
1,643,236	-				-0.3
1,643,236	-				+1.3
1,643,236	-				+0.8
1,643,236	-				-0.8
1,643,236	-				-1.4
1,643,236	-				-2.3
1,643,236	-				+1.1
1,643,236	-				-1.8
1,643,236	-				-0.7
1,643,236	-				-0.6
1,643,236	-				+0.8
1,643,236	-				+0.2
1,643,236	-				+0.0
1,643,236	-				+1.2
1,643,236	-				+0.2
1,643,236	-				+0.2
1,643,236	-				+0.5
1,643,236	-				-0.8
1,643,236	-				+0.3
1,643,266	+				+0.9
1,643,266	+				-0.6
1,643,266	+				-0.4
1,643,266	+				-0.8
1,643,266	+				-2.3
1,643,266	+				-0.3
1,643,266	+				+0.1
1,643,266	+				+0.9
1,643,266	+				-1.8
1,643,266	+				+1.1
1,643,266	+				+0.0
1,643,266	+				-1.8
1,643,266	+				-1.0
1,643,266	+				-2.5
1,643,266	+				-1.4
1,643,266	+				-0.5
1,643,266	+				-0.4
1,643,266	+				-1.3
1,643,266	+				+0.5
1,643,266	+				-0.1
1,643,266	+				-0.2
1,643,266	+				-1.2
1,643,266	+				+0.9
1,643,266	+				-0.4
1,643,266	+				-0.5
1,643,266	+				-0.6
1,643,266	+				+0.3
1,643,266	+				-0.8
1,643,267	-				+1.0
1,643,267	-				-1.4
1,643,267	-				-0.3
1,643,267	-				+0.4
1,643,267	-				-2.0
1,643,267	-				-1.3
1,643,267	-				+1.0
1,643,267	-				+1.7
1,643,267	-				+1.7
1,643,267	-				-1.4
1,643,267	-				-0.4
1,643,267	-				+1.7
1,643,267	-				+1.3
1,643,267	-				-0.8
1,643,267	-				-0.3
1,643,267	-				-0.1
1,643,267	-				-0.3
1,643,267	-				-0.3
1,643,267	-				-0.8
1,643,267	-				-0.7
1,643,267	-				-1.4
1,643,267	-				+0.7
1,643,267	-				-1.1
1,643,267	-				-1.1
1,643,313	+				+0.3
1,643,314	-				+0.2
1,643,343	+				-0.5
1,643,343	+				-1.2
1,643,343	+				-2.0
1,643,343	+				-0.3
1,643,344	-				+0.2
1,643,344	-				+0.2
1,643,376	+				-0.3
1,643,432	+				-1.4
1,643,432	+				-1.4
1,643,432	+				-0.3
1,643,432	+				-0.6
1,643,433	-				-0.3
1,643,433	-				-0.9
1,643,433	-				-1.1
1,643,476	-		MPMX19_01565	0.29	-0.6
1,643,544	+		MPMX19_01565	0.64	-0.1
1,643,544	+		MPMX19_01565	0.64	+0.5
1,643,544	+		MPMX19_01565	0.64	+0.2
1,643,544	+		MPMX19_01565	0.64	+0.2
1,643,545	-		MPMX19_01565	0.65	+0.4
1,643,610	+				+0.7
1,643,626	-				-1.8