Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01547 and MPMX19_01548 are separated by 286 nucleotides MPMX19_01548 and MPMX19_01549 are separated by 112 nucleotides
MPMX19_01547: MPMX19_01547 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 1,621,722 to 1,622,984
_01547
MPMX19_01548: MPMX19_01548 - ATP-dependent Clp protease proteolytic subunit, at 1,623,271 to 1,623,897
_01548
MPMX19_01549: MPMX19_01549 - Trigger factor, at 1,624,010 to 1,625,353
_01549
Position (kb)
1623
1624 Strain fitness (log2 ratio)
-2
-1
0
1 at 1623.060 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.984 kb on - strand at 1624.012 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 1,623,060 - +0.2 1,623,959 - +0.4 1,623,959 - -0.1 1,623,959 - -0.8 1,623,959 - -1.8 1,623,959 - +0.0 1,623,959 - -0.1 1,623,959 - -1.3 1,623,959 - -0.1 1,623,959 - -0.3 1,623,959 - -0.8 1,623,959 - -0.4 1,623,959 - -0.6 1,623,959 - -1.4 1,623,959 - +0.4 1,623,959 - +0.3 1,623,961 - -0.7 1,623,961 - -0.8 1,623,961 - +0.4 1,623,961 - -0.3 1,623,961 - -1.7 1,623,961 - +1.3 1,623,961 - +0.5 1,623,961 - -1.6 1,623,961 - +0.6 1,623,984 - -0.5 1,624,012 - -0.8
Or see this region's nucleotide sequence