Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01460

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,532,686	+		MPMX19_01459	0.50	-0.3
1,532,686	+		MPMX19_01459	0.50	-0.7
1,532,687	-		MPMX19_01459	0.50	-0.3
1,532,687	-		MPMX19_01459	0.50	+0.0
1,532,857	+		MPMX19_01459	0.59	+0.9
1,532,858	-		MPMX19_01459	0.59	+1.5
1,532,858	-		MPMX19_01459	0.59	+2.1
1,532,858	-		MPMX19_01459	0.59	+1.7
1,533,014	+		MPMX19_01459	0.68	-1.3
1,533,014	+		MPMX19_01459	0.68	-2.8
1,533,015	-		MPMX19_01459	0.68	-0.7
1,533,244	+		MPMX19_01459	0.80	-0.3
1,533,244	+		MPMX19_01459	0.80	-1.0
1,533,244	+		MPMX19_01459	0.80	-0.8
1,533,244	+		MPMX19_01459	0.80	-1.3
1,533,244	+		MPMX19_01459	0.80	-0.6
1,533,244	+		MPMX19_01459	0.80	+1.2
1,533,244	+		MPMX19_01459	0.80	+0.4
1,533,244	+		MPMX19_01459	0.80	+0.3
1,533,244	+		MPMX19_01459	0.80	-0.3
1,533,244	+		MPMX19_01459	0.80	+1.3
1,533,244	+		MPMX19_01459	0.80	-0.3
1,533,244	+		MPMX19_01459	0.80	+0.4
1,533,244	+		MPMX19_01459	0.80	-0.2
1,533,244	+		MPMX19_01459	0.80	-1.7
1,533,244	+		MPMX19_01459	0.80	-0.5
1,533,244	+		MPMX19_01459	0.80	+0.2
1,533,244	+		MPMX19_01459	0.80	-2.2
1,533,244	+		MPMX19_01459	0.80	-0.2
1,533,245	-		MPMX19_01459	0.80	+2.7
1,533,245	-		MPMX19_01459	0.80	-2.0
1,533,245	-		MPMX19_01459	0.80	+1.7
1,533,245	-		MPMX19_01459	0.80	+0.6
1,533,245	-		MPMX19_01459	0.80	+1.4
1,533,245	-		MPMX19_01459	0.80	+0.2
1,533,245	-		MPMX19_01459	0.80	-0.5
1,533,245	-		MPMX19_01459	0.80	-0.7
1,533,245	-		MPMX19_01459	0.80	+0.2
1,533,245	-		MPMX19_01459	0.80	-0.4
1,533,245	-		MPMX19_01459	0.80	+0.6
1,533,265	+		MPMX19_01459	0.81	+0.5
1,533,274	+		MPMX19_01459	0.81	-0.7
1,533,274	+		MPMX19_01459	0.81	-1.4
1,533,275	-		MPMX19_01459	0.81	-0.8
1,533,343	-		MPMX19_01459	0.85	-0.8
1,533,490	+				+2.1
1,533,490	+				+1.2
1,533,490	+				-1.2
1,533,490	+				+0.9
1,533,490	+				-1.4
1,533,490	+				-1.3
1,533,490	+				+1.0
1,533,490	+				-1.7
1,533,490	+				+0.2
1,533,490	+				-2.1
1,533,490	+				+0.5
1,533,490	+				-0.4
1,533,490	+				+0.2
1,533,490	+				+0.2
1,533,491	-				-2.7
1,533,491	-				-0.1
1,533,491	-				+1.7
1,533,491	-				+0.8
1,533,491	-				-0.8
1,533,491	-				+0.1
1,533,493	-				+0.3
1,533,595	+				+0.3
1,533,596	-				-0.4
1,533,800	+		MPMX19_01460	0.24	+1.9
1,533,800	+		MPMX19_01460	0.24	-0.8
1,533,801	-		MPMX19_01460	0.25	-0.3
1,533,898	+		MPMX19_01460	0.38	+3.5
1,533,898	+		MPMX19_01460	0.38	-0.6
1,533,899	-		MPMX19_01460	0.38	+0.9
1,533,930	+		MPMX19_01460	0.42	+0.4
1,533,930	+		MPMX19_01460	0.42	-1.6
1,533,930	+		MPMX19_01460	0.42	+0.4
1,533,930	+		MPMX19_01460	0.42	+0.3
1,533,930	+		MPMX19_01460	0.42	+0.7
1,533,930	+		MPMX19_01460	0.42	-2.0
1,533,930	+		MPMX19_01460	0.42	-0.7
1,533,930	+		MPMX19_01460	0.42	-0.5
1,533,930	+		MPMX19_01460	0.42	+1.6
1,533,930	+		MPMX19_01460	0.42	-0.6
1,533,930	+		MPMX19_01460	0.42	+3.3
1,533,930	+		MPMX19_01460	0.42	-2.3
1,533,930	+		MPMX19_01460	0.42	+0.4
1,533,930	+		MPMX19_01460	0.42	+0.7
1,533,930	+		MPMX19_01460	0.42	+1.0
1,533,931	-		MPMX19_01460	0.43	-1.3
1,533,931	-		MPMX19_01460	0.43	+0.3
1,533,931	-		MPMX19_01460	0.43	-0.3
1,533,931	-		MPMX19_01460	0.43	-0.6
1,533,931	-		MPMX19_01460	0.43	+1.5
1,533,931	-		MPMX19_01460	0.43	-0.6
1,533,931	-		MPMX19_01460	0.43	+0.3
1,533,931	-		MPMX19_01460	0.43	+1.4
1,534,148	+		MPMX19_01460	0.73	+0.4
1,534,148	+		MPMX19_01460	0.73	-1.7
1,534,148	+		MPMX19_01460	0.73	-0.4
1,534,148	+		MPMX19_01460	0.73	-1.7
1,534,149	-		MPMX19_01460	0.73	-1.3
1,534,149	-		MPMX19_01460	0.73	+0.2
1,534,305	+				-2.1
1,534,305	+				-1.2
1,534,305	+				-1.6
1,534,305	+				+1.2
1,534,305	+				-0.4
1,534,305	+				+0.7
1,534,305	+				-1.4
1,534,305	+				-0.3
1,534,306	-				+1.0
1,534,306	-				-1.7
1,534,341	+				-0.1
1,534,341	+				-0.1
1,534,341	+				+0.2
1,534,341	+				+0.3
1,534,342	-				+0.6
1,534,624	+		MPMX19_01461	0.39	-0.7
1,534,624	+		MPMX19_01461	0.39	-0.0
1,534,624	+		MPMX19_01461	0.39	-2.8
1,534,624	+		MPMX19_01461	0.39	-0.7
1,534,624	+		MPMX19_01461	0.39	+0.8
1,534,625	-		MPMX19_01461	0.39	+0.2
1,534,625	-		MPMX19_01461	0.39	-0.1
1,534,625	-		MPMX19_01461	0.39	+0.2
1,534,736	+		MPMX19_01461	0.58	-0.6
1,534,736	+		MPMX19_01461	0.58	+0.7
1,534,737	-		MPMX19_01461	0.58	+0.4
1,534,737	-		MPMX19_01461	0.58	+0.8
1,534,858	+		MPMX19_01461	0.79	+0.5
1,534,858	+		MPMX19_01461	0.79	+0.4
1,534,858	+		MPMX19_01461	0.79	-0.9
1,534,858	+		MPMX19_01461	0.79	-0.5
1,534,858	+		MPMX19_01461	0.79	-2.3
1,534,858	+		MPMX19_01461	0.79	+0.6
1,534,858	+		MPMX19_01461	0.79	+0.5
1,534,858	+		MPMX19_01461	0.79	-1.3
1,534,858	+		MPMX19_01461	0.79	-0.4
1,534,858	+		MPMX19_01461	0.79	-0.6
1,534,859	-		MPMX19_01461	0.79	+0.0
1,534,859	-		MPMX19_01461	0.79	-0.3
1,534,859	-		MPMX19_01461	0.79	+2.3
1,534,859	-		MPMX19_01461	0.79	-0.8
1,534,859	-		MPMX19_01461	0.79	+0.7
1,534,859	-		MPMX19_01461	0.79	+0.4
1,534,859	-		MPMX19_01461	0.79	-1.5
1,534,859	-		MPMX19_01461	0.79	-0.1
1,534,859	-		MPMX19_01461	0.79	-1.4
1,534,984	+				+1.2
1,534,985	-				+0.5
1,534,985	-				+0.6
1,534,985	-				-0.7
1,534,985	-				+0.0
1,534,985	-				+0.0
1,534,985	-				+0.2
1,535,008	-				+1.2
1,535,008	-				+0.9
1,535,037	+				-0.9
1,535,037	+				-1.0
1,535,049	+				-0.1
1,535,049	+				-0.1
1,535,049	+				-0.5
1,535,049	+				-0.0
1,535,049	+				+0.7
1,535,049	+				-0.1
1,535,049	+				-0.4
1,535,049	+				+0.3
1,535,049	+				+1.0
1,535,049	+				+1.4
1,535,049	+				-0.3
1,535,049	+				+0.9
1,535,049	+				-0.4
1,535,049	+				-0.7
1,535,049	+				-0.8
1,535,049	+				+0.8
1,535,049	+				-1.3
1,535,049	+				-1.4
1,535,049	+				-0.6
1,535,049	+				+1.7
1,535,049	+				-1.6
1,535,049	+				-2.2
1,535,050	-				+0.0
1,535,050	-				-1.4
1,535,050	-				+1.3
1,535,050	-				-0.4
1,535,050	-				-0.8
1,535,050	-				-1.4
1,535,050	-				-0.6
1,535,050	-				-0.0
1,535,050	-				-0.8
1,535,050	-				+0.4
1,535,050	-				-1.4
1,535,050	-				+0.0
1,535,050	-				-0.1
1,535,050	-				+0.5
1,535,050	-				-0.8
1,535,050	-				+0.0
1,535,050	-				-1.3
1,535,050	-				-0.6
1,535,050	-				-0.8
1,535,050	-				-0.3
1,535,133	+		MPMX19_01462	0.27	-0.1
1,535,133	+		MPMX19_01462	0.27	-1.5
1,535,133	+		MPMX19_01462	0.27	+0.2
1,535,133	+		MPMX19_01462	0.27	-2.1
1,535,134	-		MPMX19_01462	0.28	-0.5
1,535,211	+		MPMX19_01462	0.47	-0.6
1,535,211	+		MPMX19_01462	0.47	+1.3
1,535,211	+		MPMX19_01462	0.47	+0.4
1,535,211	+		MPMX19_01462	0.47	+0.7
1,535,211	+		MPMX19_01462	0.47	-1.0
1,535,211	+		MPMX19_01462	0.47	-0.0
1,535,211	+		MPMX19_01462	0.47	+0.3
1,535,211	+		MPMX19_01462	0.47	-1.0
1,535,211	+		MPMX19_01462	0.47	-0.2
1,535,211	+		MPMX19_01462	0.47	-0.6
1,535,212	-		MPMX19_01462	0.48	-0.1
1,535,212	-		MPMX19_01462	0.48	-1.1
1,535,212	-		MPMX19_01462	0.48	-2.3
1,535,212	-		MPMX19_01462	0.48	-1.1
1,535,212	-		MPMX19_01462	0.48	+0.6
1,535,212	-		MPMX19_01462	0.48	+0.6
1,535,212	-		MPMX19_01462	0.48	-0.1