Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01454

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,524,855	+		MPMX19_01452	0.86	-0.2
1,524,855	+		MPMX19_01452	0.86	-0.3
1,524,855	+		MPMX19_01452	0.86	+0.9
1,524,855	+		MPMX19_01452	0.86	-1.1
1,524,855	+		MPMX19_01452	0.86	+0.7
1,524,855	+		MPMX19_01452	0.86	-1.7
1,524,855	+		MPMX19_01452	0.86	-0.8
1,524,855	+		MPMX19_01452	0.86	-0.8
1,524,855	+		MPMX19_01452	0.86	+1.0
1,524,856	-		MPMX19_01452	0.86	-0.4
1,524,856	-		MPMX19_01452	0.86	-1.8
1,524,856	-		MPMX19_01452	0.86	-1.1
1,524,856	-		MPMX19_01452	0.86	-0.8
1,524,856	-		MPMX19_01452	0.86	-0.3
1,524,856	-		MPMX19_01452	0.86	-2.1
1,524,856	-		MPMX19_01452	0.86	-0.3
1,524,856	-		MPMX19_01452	0.86	-0.7
1,524,856	-		MPMX19_01452	0.86	-2.0
1,525,290	+				-1.8
1,525,290	+				+1.1
1,525,290	+				-0.1
1,525,290	+				+0.0
1,525,291	-				-1.3
1,525,291	-				+0.6
1,525,291	-				+0.0
1,525,291	-				+1.2
1,525,291	-				+0.0
1,525,291	-				-1.6
1,525,291	-				+0.4
1,525,291	-				-0.4
1,525,291	-				+0.6
1,525,291	-				-1.0
1,525,291	-				+0.4
1,525,291	-				+0.6
1,525,305	+				-0.8
1,525,305	+				-0.6
1,525,317	+				+0.3
1,525,317	+				-0.4
1,525,317	+				+0.5
1,525,317	+				+0.1
1,525,317	+				-1.8
1,525,317	+				+1.0
1,525,317	+				-0.3
1,525,317	+				+0.9
1,525,317	+				-0.1
1,525,317	+				-1.7
1,525,317	+				+1.3
1,525,318	-				+0.3
1,525,318	-				-0.7
1,525,318	-				+0.7
1,525,320	+				-0.8
1,525,320	+				-0.4
1,525,320	+				+1.5
1,525,320	+				-0.6
1,525,320	+				-0.3
1,525,320	+				+0.3
1,525,320	+				+0.9
1,525,320	+				-0.3
1,525,321	-				+0.6
1,525,321	-				-1.0
1,525,321	-				-0.2
1,525,321	-				-0.8
1,525,321	-				+0.4
1,525,321	-				-0.8
1,525,321	-				-0.3
1,525,321	-				+0.4
1,525,321	-				-0.0
1,525,321	-				-0.5
1,525,321	-				+0.0
1,525,324	+				-0.2
1,525,324	+				+2.3
1,525,324	+				-0.5
1,525,324	+				-0.7
1,525,324	+				-0.3
1,525,324	+				-0.8
1,525,324	+				-1.4
1,525,324	+				-0.1
1,525,324	+				-2.2
1,525,324	+				-2.5
1,525,324	+				-1.3
1,525,324	+				-2.0
1,525,324	+				+0.5
1,525,324	+				-1.4
1,525,324	+				-0.2
1,525,324	+				-0.3
1,525,324	+				+1.4
1,525,325	-				-0.6
1,525,325	-				-0.5
1,525,325	-				-1.8
1,525,325	-				-0.8
1,525,325	-				-0.6
1,525,325	-				-1.8
1,525,325	-				-1.4
1,525,325	-				-0.8
1,525,325	-				+0.2
1,525,325	-				+0.2
1,525,325	-				+1.2
1,525,325	-				-0.4
1,525,325	-				+0.1
1,525,325	-				-0.3
1,525,325	-				-0.4
1,525,325	-				-0.2
1,525,358	+				-1.4
1,525,358	+				-1.4
1,525,359	-				+0.4
1,525,399	+				-0.3
1,525,399	+				-3.0
1,525,399	+				-0.2
1,525,399	+				+0.3
1,525,399	+				+0.2
1,525,399	+				+0.2
1,525,399	+				-1.6
1,525,399	+				+1.1
1,525,399	+				-1.7
1,525,399	+				-1.3
1,525,399	+				-0.4
1,525,399	+				-1.4
1,525,399	+				+0.5
1,525,399	+				+0.4
1,525,399	+				-0.4
1,525,399	+				+0.7
1,525,399	+				+0.9
1,525,399	+				-0.3
1,525,399	+				-1.6
1,525,399	+				+0.7
1,525,400	-				-0.1
1,525,400	-				-0.8
1,525,400	-				+0.5
1,525,400	-				-1.2
1,525,400	-				-0.4
1,525,400	-				+0.2
1,525,400	-				+0.4
1,525,400	-				-1.6
1,525,400	-				-0.1
1,525,400	-				+0.7
1,525,400	-				-0.8
1,525,400	-				-1.3
1,525,400	-				-1.4
1,525,400	-				+0.0
1,525,400	-				-1.4
1,525,400	-				-1.3
1,525,400	-				-1.0
1,525,400	-				-0.0
1,525,517	+		MPMX19_01453	0.19	+0.3
1,525,517	+		MPMX19_01453	0.19	+0.7
1,525,517	+		MPMX19_01453	0.19	-1.2
1,525,517	+		MPMX19_01453	0.19	-2.0
1,525,517	+		MPMX19_01453	0.19	+0.7
1,525,517	+		MPMX19_01453	0.19	-0.7
1,525,517	+		MPMX19_01453	0.19	+2.1
1,525,517	+		MPMX19_01453	0.19	+0.3
1,525,517	+		MPMX19_01453	0.19	-0.6
1,525,517	+		MPMX19_01453	0.19	-0.3
1,525,517	+		MPMX19_01453	0.19	+0.7
1,525,517	+		MPMX19_01453	0.19	-0.4
1,525,517	+		MPMX19_01453	0.19	-0.4
1,525,517	+		MPMX19_01453	0.19	-0.0
1,525,517	+		MPMX19_01453	0.19	+0.3
1,525,517	+		MPMX19_01453	0.19	-0.4
1,525,517	+		MPMX19_01453	0.19	-1.1
1,525,517	+		MPMX19_01453	0.19	-1.3
1,525,517	+		MPMX19_01453	0.19	-0.4
1,525,517	+		MPMX19_01453	0.19	-0.7
1,525,517	+		MPMX19_01453	0.19	+0.4
1,525,517	+		MPMX19_01453	0.19	-0.7
1,525,517	+		MPMX19_01453	0.19	+0.2
1,525,517	+		MPMX19_01453	0.19	-1.0
1,525,518	-		MPMX19_01453	0.19	-1.6
1,525,518	-		MPMX19_01453	0.19	-2.0
1,525,518	-		MPMX19_01453	0.19	-1.6
1,525,518	-		MPMX19_01453	0.19	-0.3
1,525,518	-		MPMX19_01453	0.19	-1.4
1,525,518	-		MPMX19_01453	0.19	-1.4
1,525,518	-		MPMX19_01453	0.19	-0.4
1,525,518	-		MPMX19_01453	0.19	-0.5
1,525,518	-		MPMX19_01453	0.19	-0.2
1,525,518	-		MPMX19_01453	0.19	-0.2
1,525,518	-		MPMX19_01453	0.19	+0.7
1,525,518	-		MPMX19_01453	0.19	-1.6
1,525,518	-		MPMX19_01453	0.19	-0.2
1,525,518	-		MPMX19_01453	0.19	+0.7
1,525,518	-		MPMX19_01453	0.19	-0.6
1,525,518	-		MPMX19_01453	0.19	+0.3
1,525,518	-		MPMX19_01453	0.19	+0.0
1,525,775	+		MPMX19_01453	0.89	-0.3
1,525,776	-		MPMX19_01453	0.89	+0.0
1,525,776	-		MPMX19_01453	0.89	-1.2
1,525,776	-		MPMX19_01453	0.89	+0.1
1,526,001	+		MPMX19_01454	0.36	-1.1
1,526,001	+		MPMX19_01454	0.36	+0.2
1,526,001	+		MPMX19_01454	0.36	+1.2
1,526,001	+		MPMX19_01454	0.36	-0.6
1,526,108	+		MPMX19_01454	0.57	-0.1
1,526,109	-		MPMX19_01454	0.57	+0.7
1,526,109	-		MPMX19_01454	0.57	+0.2
1,526,393	+				+0.5
1,526,393	+				-0.4
1,526,393	+				+0.0
1,526,393	+				-2.1
1,526,394	-				-0.8
1,526,394	-				+0.0
1,526,394	-				-1.1
1,526,394	-				-1.4
1,526,394	-				+0.6
1,526,998	-				-0.5
1,526,998	-				+0.2
1,527,000	-				+0.2
1,527,000	-				+1.5
1,527,193	+				+0.8