Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01413

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,476,460	+		MPMX19_01411	0.84	-1.1
1,476,460	+		MPMX19_01411	0.84	+0.6
1,476,460	+		MPMX19_01411	0.84	-1.1
1,476,460	+		MPMX19_01411	0.84	-1.0
1,476,460	+		MPMX19_01411	0.84	-0.0
1,476,460	+		MPMX19_01411	0.84	-0.1
1,476,461	-		MPMX19_01411	0.84	-1.1
1,476,461	-		MPMX19_01411	0.84	-0.0
1,476,461	-		MPMX19_01411	0.84	-0.2
1,476,461	-		MPMX19_01411	0.84	+1.1
1,476,461	-		MPMX19_01411	0.84	-0.9
1,476,461	-		MPMX19_01411	0.84	-0.8
1,476,461	-		MPMX19_01411	0.84	-0.4
1,476,634	+				-0.3
1,476,634	+				-1.2
1,476,635	-				-0.3
1,476,635	-				-0.1
1,476,635	-				+0.1
1,476,635	-				-1.0
1,476,664	+				+0.4
1,476,664	+				-0.6
1,476,664	+				+0.7
1,476,664	+				+0.6
1,476,664	+				-0.8
1,476,664	+				-0.1
1,476,664	+				-1.6
1,476,664	+				-1.4
1,476,665	-				+1.5
1,476,665	-				+1.7
1,476,665	-				-1.4
1,476,665	-				+0.4
1,476,665	-				-0.8
1,476,665	-				-0.2
1,476,665	-				-0.1
1,476,665	-				-0.4
1,476,665	-				-0.3
1,476,665	-				+1.0
1,476,665	-				-1.9
1,476,665	-				+0.4
1,476,737	+				-0.1
1,476,737	+				-0.9
1,476,737	+				-2.1
1,476,737	+				-0.7
1,476,737	+				-0.9
1,476,737	+				-1.7
1,476,738	-				-0.1
1,476,738	-				+0.4
1,476,738	-				-0.1
1,476,835	+				-1.3
1,476,835	+				-1.1
1,476,835	+				+1.3
1,476,835	+				-0.2
1,476,836	-				-0.2
1,476,836	-				-0.7
1,476,907	+				-0.7
1,476,907	+				+1.7
1,476,907	+				+0.1
1,476,907	+				+0.4
1,476,907	+				+0.3
1,476,908	-				+0.6
1,476,908	-				+0.7
1,476,908	-				-2.0
1,476,908	-				-1.4
1,476,908	-				-0.8
1,476,908	-				+0.6
1,476,908	-				-0.1
1,476,992	+		MPMX19_01412	0.12	-0.4
1,476,992	+		MPMX19_01412	0.12	-0.4
1,476,992	+		MPMX19_01412	0.12	+0.8
1,476,993	-		MPMX19_01412	0.12	-1.9
1,477,302	+		MPMX19_01412	0.84	+2.0
1,477,302	+		MPMX19_01412	0.84	-0.9
1,477,302	+		MPMX19_01412	0.84	-0.7
1,477,302	+		MPMX19_01412	0.84	-0.2
1,477,302	+		MPMX19_01412	0.84	-0.2
1,477,302	+		MPMX19_01412	0.84	-1.2
1,477,302	+		MPMX19_01412	0.84	+0.1
1,477,302	+		MPMX19_01412	0.84	+0.6
1,477,302	+		MPMX19_01412	0.84	+1.0
1,477,302	+		MPMX19_01412	0.84	-0.4
1,477,302	+		MPMX19_01412	0.84	+1.7
1,477,302	+		MPMX19_01412	0.84	-2.4
1,477,302	+		MPMX19_01412	0.84	-0.4
1,477,302	+		MPMX19_01412	0.84	+0.0
1,477,302	+		MPMX19_01412	0.84	-1.1
1,477,302	+		MPMX19_01412	0.84	+0.6
1,477,302	+		MPMX19_01412	0.84	-0.5
1,477,302	+		MPMX19_01412	0.84	-1.6
1,477,302	+		MPMX19_01412	0.84	+0.2
1,477,302	+		MPMX19_01412	0.84	+1.7
1,477,302	+		MPMX19_01412	0.84	-1.3
1,477,302	+		MPMX19_01412	0.84	-2.3
1,477,302	+		MPMX19_01412	0.84	-0.2
1,477,302	+		MPMX19_01412	0.84	+1.2
1,477,303	-		MPMX19_01412	0.84	-0.1
1,477,303	-		MPMX19_01412	0.84	-2.1
1,477,303	-		MPMX19_01412	0.84	+0.1
1,477,303	-		MPMX19_01412	0.84	-2.6
1,477,303	-		MPMX19_01412	0.84	+0.2
1,477,303	-		MPMX19_01412	0.84	-1.2
1,477,303	-		MPMX19_01412	0.84	+0.8
1,477,303	-		MPMX19_01412	0.84	+0.5
1,477,303	-		MPMX19_01412	0.84	+0.9
1,477,303	-		MPMX19_01412	0.84	+0.7
1,477,303	-		MPMX19_01412	0.84	+0.1
1,477,303	-		MPMX19_01412	0.84	-0.2
1,477,368	+				-0.9
1,477,368	+				-0.2
1,477,369	-				+0.7
1,477,369	-				-0.6
1,477,369	-				-0.0
1,477,369	-				-0.3
1,477,369	-				+0.7
1,477,369	-				-1.0
1,477,402	+				+0.7
1,477,402	+				+0.1
1,477,402	+				+0.8
1,477,403	-				+1.4
1,477,565	+		MPMX19_01413	0.42	+1.0
1,477,565	+		MPMX19_01413	0.42	-1.3
1,477,565	+		MPMX19_01413	0.42	+0.4
1,477,565	+		MPMX19_01413	0.42	-1.3
1,477,565	+		MPMX19_01413	0.42	-0.1
1,477,565	+		MPMX19_01413	0.42	-0.1
1,477,566	-		MPMX19_01413	0.42	+0.4
1,477,566	-		MPMX19_01413	0.42	+0.4
1,477,566	-		MPMX19_01413	0.42	-0.6
1,477,566	-		MPMX19_01413	0.42	-0.3
1,477,566	-		MPMX19_01413	0.42	+0.7
1,477,566	-		MPMX19_01413	0.42	+0.4
1,477,566	-		MPMX19_01413	0.42	-0.7
1,477,566	-		MPMX19_01413	0.42	+0.1
1,477,566	-		MPMX19_01413	0.42	-0.9
1,477,566	-		MPMX19_01413	0.42	+0.6
1,477,656	+		MPMX19_01413	0.62	-1.1
1,477,790	+				+0.4
1,477,790	+				+1.1
1,477,791	-				+0.3
1,477,791	-				-0.2
1,477,791	-				-1.5
1,477,791	-				-1.0
1,477,921	+				-1.1
1,477,921	+				-1.9
1,477,921	+				-1.1
1,477,921	+				+0.4
1,477,921	+				-0.8
1,477,921	+				+0.4
1,477,921	+				-0.3
1,477,921	+				-2.0
1,477,921	+				+1.7
1,477,921	+				-0.3
1,477,921	+				-0.7
1,477,921	+				+0.7
1,477,921	+				+0.5
1,477,921	+				-0.3
1,477,921	+				+1.0
1,477,921	+				-1.0
1,477,922	-				-1.7
1,477,922	-				+0.7
1,477,922	-				+1.0
1,477,922	-				-1.9
1,477,922	-				+0.8
1,477,922	-				-0.5
1,477,922	-				-0.6
1,477,922	-				+0.2
1,477,922	-				+0.2
1,477,922	-				-0.5
1,477,922	-				+1.7
1,477,922	-				-0.7
1,477,922	-				-2.0
1,477,922	-				+0.9
1,477,922	-				+0.1
1,477,922	-				+0.6
1,477,922	-				-0.5
1,477,922	-				-1.2
1,478,141	+		MPMX19_01414	0.26	-0.1
1,478,141	+		MPMX19_01414	0.26	-1.6
1,478,141	+		MPMX19_01414	0.26	+0.1
1,478,141	+		MPMX19_01414	0.26	-0.7
1,478,141	+		MPMX19_01414	0.26	-2.2
1,478,141	+		MPMX19_01414	0.26	-1.4
1,478,142	-		MPMX19_01414	0.27	-1.0
1,478,142	-		MPMX19_01414	0.27	-0.2
1,478,142	-		MPMX19_01414	0.27	-0.1
1,478,142	-		MPMX19_01414	0.27	-1.9
1,478,143	+		MPMX19_01414	0.27	+0.1
1,478,143	+		MPMX19_01414	0.27	+0.5
1,478,143	+		MPMX19_01414	0.27	-0.1
1,478,143	+		MPMX19_01414	0.27	+0.4
1,478,143	+		MPMX19_01414	0.27	+1.1
1,478,143	+		MPMX19_01414	0.27	-0.1
1,478,143	+		MPMX19_01414	0.27	+0.7
1,478,143	+		MPMX19_01414	0.27	-0.3
1,478,143	+		MPMX19_01414	0.27	-1.8
1,478,143	+		MPMX19_01414	0.27	-1.6
1,478,143	+		MPMX19_01414	0.27	-1.4
1,478,143	+		MPMX19_01414	0.27	-0.1
1,478,143	+		MPMX19_01414	0.27	-0.6
1,478,144	-		MPMX19_01414	0.27	-0.5
1,478,144	-		MPMX19_01414	0.27	-1.1
1,478,144	-		MPMX19_01414	0.27	-2.0
1,478,144	-		MPMX19_01414	0.27	-0.3
1,478,144	-		MPMX19_01414	0.27	+2.0
1,478,144	-		MPMX19_01414	0.27	+0.4
1,478,144	-		MPMX19_01414	0.27	-0.5
1,478,144	-		MPMX19_01414	0.27	-1.6
1,478,144	-		MPMX19_01414	0.27	+0.5
1,478,144	-		MPMX19_01414	0.27	-1.0
1,478,144	-		MPMX19_01414	0.27	-1.0
1,478,144	-		MPMX19_01414	0.27	-2.4
1,478,144	-		MPMX19_01414	0.27	+0.9
1,478,144	-		MPMX19_01414	0.27	+0.4
1,478,144	-		MPMX19_01414	0.27	+0.6
1,478,161	+		MPMX19_01414	0.28	+0.1
1,478,161	+		MPMX19_01414	0.28	-2.4
1,478,161	+		MPMX19_01414	0.28	+0.4
1,478,162	-		MPMX19_01414	0.28	-1.7
1,478,162	-		MPMX19_01414	0.28	+0.7
1,478,162	-		MPMX19_01414	0.28	-2.1
1,478,162	-		MPMX19_01414	0.28	+0.0
1,478,162	-		MPMX19_01414	0.28	-0.5
1,478,162	-		MPMX19_01414	0.28	-1.2
1,478,302	+		MPMX19_01414	0.41	-0.3
1,478,302	+		MPMX19_01414	0.41	-1.2
1,478,302	+		MPMX19_01414	0.41	-0.5
1,478,302	+		MPMX19_01414	0.41	-0.4
1,478,303	-		MPMX19_01414	0.41	-0.4
1,478,303	-		MPMX19_01414	0.41	-0.2
1,478,303	-		MPMX19_01414	0.41	-0.4
1,478,473	+		MPMX19_01414	0.57	-1.0
1,478,473	+		MPMX19_01414	0.57	-1.4
1,478,474	-		MPMX19_01414	0.57	-0.6
1,478,474	-		MPMX19_01414	0.57	-1.0
1,478,474	-		MPMX19_01414	0.57	+0.1
1,478,474	-		MPMX19_01414	0.57	+1.1
1,478,773	+		MPMX19_01414	0.84	-1.4
1,478,773	+		MPMX19_01414	0.84	-0.7
1,478,774	-		MPMX19_01414	0.84	-0.7
1,478,774	-		MPMX19_01414	0.84	-0.7
1,478,774	-		MPMX19_01414	0.84	-1.4
1,478,774	-		MPMX19_01414	0.84	-0.7