Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01395

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,459,961	+		MPMX19_01393	0.47	+0.5
1,460,009	+		MPMX19_01393	0.59	+1.2
1,460,009	+		MPMX19_01393	0.59	-1.0
1,460,010	-		MPMX19_01393	0.59	-1.2
1,460,010	-		MPMX19_01393	0.59	-0.5
1,460,010	-		MPMX19_01393	0.59	+0.3
1,460,010	-		MPMX19_01393	0.59	-0.9
1,460,010	-		MPMX19_01393	0.59	-0.6
1,460,010	-		MPMX19_01393	0.59	-0.8
1,460,010	-		MPMX19_01393	0.59	+0.1
1,460,090	+		MPMX19_01393	0.78	-0.7
1,460,090	+		MPMX19_01393	0.78	-0.5
1,460,090	+		MPMX19_01393	0.78	-1.6
1,460,090	+		MPMX19_01393	0.78	+0.5
1,460,090	+		MPMX19_01393	0.78	+0.2
1,460,090	+		MPMX19_01393	0.78	+0.2
1,460,091	-		MPMX19_01393	0.79	+0.0
1,460,091	-		MPMX19_01393	0.79	+0.8
1,460,091	-		MPMX19_01393	0.79	-0.3
1,460,091	-		MPMX19_01393	0.79	-1.5
1,460,091	-		MPMX19_01393	0.79	-0.8
1,460,091	-		MPMX19_01393	0.79	-0.1
1,460,091	-		MPMX19_01393	0.79	+1.2
1,460,091	-		MPMX19_01393	0.79	-1.9
1,460,476	+		MPMX19_01394	0.43	-2.0
1,460,476	+		MPMX19_01394	0.43	+0.7
1,460,477	-		MPMX19_01394	0.43	+0.1
1,460,477	-		MPMX19_01394	0.43	-0.6
1,460,764	+				-0.6
1,460,764	+				+0.7
1,460,765	-				-0.3
1,460,765	-				+2.3
1,460,765	-				-0.6
1,460,788	+				+2.1
1,460,788	+				+0.8
1,460,788	+				-1.3
1,460,789	-				-0.3
1,460,789	-				+0.1
1,460,801	+				+0.3
1,460,801	+				+0.1
1,460,801	+				+0.2
1,460,802	-				-0.3
1,460,822	-				-0.7
1,460,850	+				+0.7
1,460,851	-				-0.5
1,460,897	+				-0.6
1,460,897	+				+0.6
1,460,897	+				-0.6
1,460,897	+				-1.1
1,460,897	+				-0.9
1,460,897	+				+0.7
1,460,897	+				-2.5
1,460,897	+				+0.7
1,460,897	+				-0.2
1,460,897	+				-1.0
1,460,897	+				-0.1
1,460,897	+				-0.8
1,460,898	-				-2.0
1,460,898	-				-0.9
1,460,898	-				+0.2
1,460,898	-				-0.7
1,460,898	-				-1.2
1,460,898	-				-1.2
1,460,898	-				-0.9
1,460,898	-				+0.1
1,460,898	-				-0.9
1,461,245	+		MPMX19_01395	0.50	-1.7
1,461,393	-		MPMX19_01395	0.71	-1.4
1,461,429	+		MPMX19_01395	0.76	-3.4
1,461,429	+		MPMX19_01395	0.76	-0.4
1,461,625	+				+1.1
1,461,625	+				-0.3
1,461,625	+				-0.7
1,461,625	+				+0.1
1,461,625	+				-0.9
1,461,625	+				-0.9
1,461,625	+				-0.7
1,461,625	+				-0.1
1,461,625	+				+0.5
1,461,625	+				-0.9
1,461,625	+				-0.3
1,461,625	+				-1.5
1,461,625	+				-0.2
1,461,626	-				+0.5
1,461,626	-				-1.6
1,461,626	-				+1.7
1,461,626	-				-0.6
1,461,626	-				-0.5
1,461,626	-				+0.1
1,461,626	-				+0.5
1,461,626	-				-1.3
1,461,626	-				-2.2
1,461,626	-				+0.9
1,461,626	-				+0.2
1,461,626	-				-0.9
1,461,626	-				+0.2
1,461,627	+				-1.9
1,461,627	+				+0.1
1,461,627	+				-0.1
1,461,627	+				-0.8
1,461,627	+				+0.1
1,461,627	+				-1.2
1,461,627	+				+0.6
1,461,627	+				-1.5
1,461,627	+				+1.7
1,461,627	+				+1.4
1,461,627	+				+1.9
1,461,627	+				-0.3
1,461,627	+				-1.3
1,461,627	+				-0.6
1,461,627	+				-1.0
1,461,627	+				-1.1
1,461,627	+				-2.5
1,461,627	+				-0.1
1,461,627	+				+0.1
1,461,627	+				-0.3
1,461,627	+				+1.5
1,461,627	+				-0.3
1,461,627	+				+1.5
1,461,627	+				+0.2
1,461,627	+				+0.5
1,461,627	+				-1.4
1,461,627	+				-0.4
1,461,627	+				+1.3
1,461,627	+				+0.4
1,461,627	+				+0.7
1,461,627	+				+0.1
1,461,627	+				-1.4
1,461,627	+				+0.1
1,461,627	+				-0.3
1,461,627	+				-1.5
1,461,627	+				+0.1
1,461,627	+				-0.0
1,461,627	+				-1.5
1,461,627	+				-0.1
1,461,627	+				+0.8
1,461,627	+				+0.5
1,461,627	+				+0.2
1,461,627	+				-0.8
1,461,627	+				-0.5
1,461,627	+				-0.0
1,461,627	+				+0.4
1,461,627	+				+0.9
1,461,627	+				+0.7
1,461,627	+				+0.7
1,461,627	+				+0.5
1,461,627	+				-1.1
1,461,627	+				+0.7
1,461,627	+				+0.8
1,461,627	+				-0.5
1,461,627	+				-0.1
1,461,627	+				-0.5
1,461,627	+				+0.5
1,461,627	+				-1.3
1,461,627	+				+0.5
1,461,627	+				-1.7
1,461,627	+				-0.7
1,461,627	+				+2.3
1,461,627	+				+0.1
1,461,627	+				-1.1
1,461,627	+				-1.7
1,461,628	-				+0.9
1,461,628	-				-0.7
1,461,628	-				-0.3
1,461,628	-				+1.0
1,461,628	-				+0.0
1,461,628	-				-0.1
1,461,628	-				-0.2
1,461,628	-				+0.5
1,461,628	-				-0.0
1,461,628	-				+0.1
1,461,628	-				-0.3
1,461,628	-				-1.5
1,461,628	-				+1.4
1,461,628	-				+1.0
1,461,628	-				-0.4
1,461,628	-				+0.4
1,461,628	-				-0.5
1,461,628	-				-0.2
1,461,628	-				-1.6
1,461,628	-				-0.9
1,461,628	-				-1.6
1,461,628	-				-0.3
1,461,628	-				-0.6
1,461,628	-				-0.3
1,461,628	-				-0.4
1,461,628	-				-0.6
1,461,628	-				+0.1
1,461,628	-				-1.9
1,461,628	-				-1.4
1,461,628	-				+0.2
1,461,628	-				-0.4
1,461,628	-				-2.2
1,461,628	-				+0.7
1,461,628	-				+0.7
1,461,628	-				-0.4
1,461,628	-				+0.5
1,461,711	+				-0.6
1,461,711	+				+0.5
1,461,711	+				-1.0
1,461,711	+				-0.9
1,461,711	+				-0.0
1,461,711	+				-0.0
1,461,712	-				-2.0
1,461,712	-				-0.6
1,461,712	-				-0.4
1,461,712	-				-0.9
1,461,712	-				-1.5
1,461,712	-				+0.1
1,461,991	-		MPMX19_01396	0.66	-0.3
1,462,160	-				+0.9
1,462,202	+				+0.1
1,462,202	+				-2.4
1,462,202	+				-0.1
1,462,202	+				-0.6
1,462,203	-				+0.8
1,462,226	+				-0.6
1,462,226	+				+0.7
1,462,227	-				-0.7
1,462,227	-				-0.3
1,462,227	-				-0.9
1,462,227	-				-1.3
1,462,227	-				+0.3
1,462,265	+		MPMX19_01397	0.11	+1.0
1,462,265	+		MPMX19_01397	0.11	-0.3
1,462,266	-		MPMX19_01397	0.11	-0.4
1,462,266	-		MPMX19_01397	0.11	+0.4
1,462,266	-		MPMX19_01397	0.11	-0.7
1,462,266	-		MPMX19_01397	0.11	-1.3
1,462,266	-		MPMX19_01397	0.11	+0.1
1,462,282	-		MPMX19_01397	0.14	-1.8
1,462,282	-		MPMX19_01397	0.14	-0.5
1,462,282	-		MPMX19_01397	0.14	+0.3
1,462,282	-		MPMX19_01397	0.14	+0.4
1,462,282	-		MPMX19_01397	0.14	-1.5
1,462,282	-		MPMX19_01397	0.14	+0.4
1,462,282	-		MPMX19_01397	0.14	-0.9
1,462,293	+		MPMX19_01397	0.15	-1.4
1,462,299	+		MPMX19_01397	0.16	-0.4
1,462,313	+		MPMX19_01397	0.18	-0.3
1,462,328	+		MPMX19_01397	0.20	+0.6
1,462,328	+		MPMX19_01397	0.20	-0.5
1,462,328	+		MPMX19_01397	0.20	-0.2
1,462,329	-		MPMX19_01397	0.20	-0.1
1,462,329	-		MPMX19_01397	0.20	-0.9
1,462,349	+		MPMX19_01397	0.23	-1.0
1,462,349	+		MPMX19_01397	0.23	-1.1
1,462,349	+		MPMX19_01397	0.23	+0.7
1,462,350	-		MPMX19_01397	0.23	+1.5
1,462,350	-		MPMX19_01397	0.23	+0.1
1,462,403	+		MPMX19_01397	0.31	+0.1
1,462,404	-		MPMX19_01397	0.31	-1.7
1,462,410	+		MPMX19_01397	0.32	-0.4
1,462,469	+		MPMX19_01397	0.41	-0.6
1,462,472	-		MPMX19_01397	0.41	-0.6
1,462,472	-		MPMX19_01397	0.41	+0.1
1,462,475	+		MPMX19_01397	0.42	-0.9
1,462,476	-		MPMX19_01397	0.42	-2.5
1,462,476	-		MPMX19_01397	0.42	+0.4
1,462,488	-		MPMX19_01397	0.44	+0.0
1,462,488	-		MPMX19_01397	0.44	-0.4
1,462,537	+		MPMX19_01397	0.51	+0.6
1,462,537	+		MPMX19_01397	0.51	+0.4
1,462,537	+		MPMX19_01397	0.51	-1.7
1,462,537	+		MPMX19_01397	0.51	+1.0
1,462,537	+		MPMX19_01397	0.51	-1.3
1,462,537	+		MPMX19_01397	0.51	-1.4
1,462,538	-		MPMX19_01397	0.51	+0.4
1,462,564	+		MPMX19_01397	0.55	-1.7
1,462,564	+		MPMX19_01397	0.55	-0.1
1,462,565	-		MPMX19_01397	0.55	+0.7
1,462,593	-		MPMX19_01397	0.59	-0.7