Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01357

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,410,116	+		MPMX19_01355	0.31	+0.2
1,410,116	+		MPMX19_01355	0.31	-2.5
1,410,116	+		MPMX19_01355	0.31	-0.9
1,410,116	+		MPMX19_01355	0.31	+0.1
1,410,117	-		MPMX19_01355	0.31	-0.2
1,410,117	-		MPMX19_01355	0.31	-0.3
1,410,117	-		MPMX19_01355	0.31	+1.1
1,410,117	-		MPMX19_01355	0.31	-0.3
1,410,117	-		MPMX19_01355	0.31	+0.9
1,410,117	-		MPMX19_01355	0.31	-0.1
1,410,117	-		MPMX19_01355	0.31	-2.1
1,410,117	-		MPMX19_01355	0.31	+0.4
1,410,117	-		MPMX19_01355	0.31	-0.9
1,410,117	-		MPMX19_01355	0.31	-2.2
1,410,117	-		MPMX19_01355	0.31	+0.3
1,410,117	-		MPMX19_01355	0.31	+0.5
1,410,117	-		MPMX19_01355	0.31	+0.4
1,410,117	-		MPMX19_01355	0.31	+1.1
1,410,117	-		MPMX19_01355	0.31	-0.3
1,410,118	+		MPMX19_01355	0.31	-0.4
1,410,118	+		MPMX19_01355	0.31	+0.1
1,410,118	+		MPMX19_01355	0.31	-0.3
1,410,118	+		MPMX19_01355	0.31	+0.7
1,410,118	+		MPMX19_01355	0.31	-1.1
1,410,118	+		MPMX19_01355	0.31	-0.9
1,410,118	+		MPMX19_01355	0.31	+0.4
1,410,118	+		MPMX19_01355	0.31	-1.3
1,410,118	+		MPMX19_01355	0.31	-0.0
1,410,118	+		MPMX19_01355	0.31	-0.0
1,410,118	+		MPMX19_01355	0.31	+0.4
1,410,118	+		MPMX19_01355	0.31	+0.4
1,410,118	+		MPMX19_01355	0.31	+0.1
1,410,119	-		MPMX19_01355	0.31	+1.0
1,410,119	-		MPMX19_01355	0.31	-1.1
1,410,119	-		MPMX19_01355	0.31	-1.2
1,410,119	-		MPMX19_01355	0.31	-1.2
1,410,119	-		MPMX19_01355	0.31	-0.1
1,410,119	-		MPMX19_01355	0.31	-0.7
1,410,119	-		MPMX19_01355	0.31	-0.2
1,410,119	-		MPMX19_01355	0.31	-0.5
1,410,119	-		MPMX19_01355	0.31	+0.3
1,410,119	-		MPMX19_01355	0.31	-0.9
1,410,119	-		MPMX19_01355	0.31	-0.9
1,410,119	-		MPMX19_01355	0.31	-0.7
1,410,119	-		MPMX19_01355	0.31	+0.4
1,410,119	-		MPMX19_01355	0.31	-0.4
1,410,119	-		MPMX19_01355	0.31	+0.7
1,410,119	-		MPMX19_01355	0.31	-0.3
1,410,197	+		MPMX19_01355	0.51	-0.5
1,410,197	+		MPMX19_01355	0.51	-2.3
1,410,197	+		MPMX19_01355	0.51	+0.0
1,410,197	+		MPMX19_01355	0.51	-0.1
1,410,198	-		MPMX19_01355	0.51	+1.1
1,410,198	-		MPMX19_01355	0.51	-0.7
1,410,209	+		MPMX19_01355	0.54	-0.7
1,410,209	+		MPMX19_01355	0.54	+0.1
1,410,209	+		MPMX19_01355	0.54	-1.3
1,410,209	+		MPMX19_01355	0.54	-1.0
1,410,209	+		MPMX19_01355	0.54	-1.6
1,410,209	+		MPMX19_01355	0.54	-3.0
1,410,209	+		MPMX19_01355	0.54	-1.7
1,410,210	-		MPMX19_01355	0.54	-2.0
1,410,210	-		MPMX19_01355	0.54	-0.7
1,410,210	-		MPMX19_01355	0.54	-1.1
1,410,210	-		MPMX19_01355	0.54	-2.0
1,410,210	-		MPMX19_01355	0.54	-1.9
1,410,210	-		MPMX19_01355	0.54	+1.3
1,410,210	-		MPMX19_01355	0.54	-0.7
1,410,210	-		MPMX19_01355	0.54	+0.7
1,410,210	-		MPMX19_01355	0.54	-1.1
1,410,210	-		MPMX19_01355	0.54	-2.2
1,410,210	-		MPMX19_01355	0.54	-1.6
1,410,210	-		MPMX19_01355	0.54	-0.5
1,410,210	-		MPMX19_01355	0.54	-0.9
1,410,210	-		MPMX19_01355	0.54	-1.3
1,410,210	-		MPMX19_01355	0.54	-2.1
1,410,346	+		MPMX19_01355	0.89	-0.1
1,410,346	+		MPMX19_01355	0.89	+0.0
1,410,346	+		MPMX19_01355	0.89	-1.3
1,410,346	+		MPMX19_01355	0.89	+0.4
1,410,346	+		MPMX19_01355	0.89	-0.0
1,410,346	+		MPMX19_01355	0.89	-2.1
1,410,346	+		MPMX19_01355	0.89	-0.6
1,410,346	+		MPMX19_01355	0.89	-1.1
1,410,346	+		MPMX19_01355	0.89	+0.7
1,410,346	+		MPMX19_01355	0.89	+0.1
1,410,347	-		MPMX19_01355	0.89	+1.0
1,410,347	-		MPMX19_01355	0.89	+0.5
1,410,347	-		MPMX19_01355	0.89	-0.3
1,410,347	-		MPMX19_01355	0.89	-0.7
1,410,347	-		MPMX19_01355	0.89	+1.4
1,410,422	+				-0.7
1,410,422	+				+0.3
1,410,422	+				-1.5
1,410,422	+				+0.0
1,410,422	+				-0.3
1,410,422	+				+0.3
1,410,422	+				-1.9
1,410,422	+				+0.2
1,410,422	+				+0.4
1,410,422	+				-0.1
1,410,422	+				-0.5
1,410,423	-				-2.0
1,410,423	-				-0.6
1,410,423	-				+1.1
1,410,423	-				-0.2
1,410,423	-				+1.3
1,410,676	+		MPMX19_01356	0.29	-0.2
1,410,676	+		MPMX19_01356	0.29	+0.6
1,410,676	+		MPMX19_01356	0.29	+0.3
1,410,676	+		MPMX19_01356	0.29	-1.4
1,410,677	-		MPMX19_01356	0.29	-0.6
1,410,677	-		MPMX19_01356	0.29	+0.3
1,410,856	+		MPMX19_01356	0.63	-2.1
1,410,856	+		MPMX19_01356	0.63	-0.5
1,410,856	+		MPMX19_01356	0.63	-0.4
1,410,856	+		MPMX19_01356	0.63	+1.1
1,410,856	+		MPMX19_01356	0.63	+1.3
1,410,856	+		MPMX19_01356	0.63	-0.1
1,410,856	+		MPMX19_01356	0.63	-0.6
1,410,856	+		MPMX19_01356	0.63	-0.4
1,410,856	+		MPMX19_01356	0.63	-2.4
1,410,856	+		MPMX19_01356	0.63	-0.0
1,410,856	+		MPMX19_01356	0.63	+0.7
1,410,856	+		MPMX19_01356	0.63	-1.0
1,410,856	+		MPMX19_01356	0.63	-1.4
1,410,856	+		MPMX19_01356	0.63	-0.3
1,410,856	+		MPMX19_01356	0.63	-0.6
1,410,856	+		MPMX19_01356	0.63	-1.6
1,410,856	+		MPMX19_01356	0.63	+0.1
1,410,856	+		MPMX19_01356	0.63	-0.8
1,410,856	+		MPMX19_01356	0.63	+0.5
1,410,856	+		MPMX19_01356	0.63	-1.6
1,410,856	+		MPMX19_01356	0.63	+2.1
1,410,856	+		MPMX19_01356	0.63	-0.9
1,410,856	+		MPMX19_01356	0.63	+0.5
1,410,856	+		MPMX19_01356	0.63	+0.7
1,410,856	+		MPMX19_01356	0.63	-2.4
1,410,856	+		MPMX19_01356	0.63	+1.0
1,410,856	+		MPMX19_01356	0.63	-1.5
1,410,856	+		MPMX19_01356	0.63	-0.2
1,410,856	+		MPMX19_01356	0.63	+0.8
1,410,856	+		MPMX19_01356	0.63	-0.4
1,410,856	+		MPMX19_01356	0.63	-0.3
1,410,856	+		MPMX19_01356	0.63	-2.1
1,410,856	+		MPMX19_01356	0.63	+1.3
1,410,856	+		MPMX19_01356	0.63	-0.4
1,410,856	+		MPMX19_01356	0.63	-0.4
1,410,856	+		MPMX19_01356	0.63	-0.8
1,410,856	+		MPMX19_01356	0.63	-1.2
1,410,857	-		MPMX19_01356	0.63	-0.0
1,410,857	-		MPMX19_01356	0.63	+1.0
1,410,857	-		MPMX19_01356	0.63	+2.0
1,410,857	-		MPMX19_01356	0.63	-0.4
1,410,857	-		MPMX19_01356	0.63	+0.5
1,410,857	-		MPMX19_01356	0.63	-0.5
1,410,857	-		MPMX19_01356	0.63	-0.5
1,410,857	-		MPMX19_01356	0.63	-1.6
1,410,857	-		MPMX19_01356	0.63	-0.9
1,410,857	-		MPMX19_01356	0.63	-1.0
1,410,857	-		MPMX19_01356	0.63	+1.0
1,410,857	-		MPMX19_01356	0.63	+1.3
1,410,857	-		MPMX19_01356	0.63	-2.5
1,410,857	-		MPMX19_01356	0.63	-0.6
1,410,857	-		MPMX19_01356	0.63	+0.0
1,410,857	-		MPMX19_01356	0.63	+0.3
1,410,857	-		MPMX19_01356	0.63	-0.8
1,410,857	-		MPMX19_01356	0.63	-0.7
1,410,857	-		MPMX19_01356	0.63	-0.9
1,410,857	-		MPMX19_01356	0.63	-1.5
1,410,857	-		MPMX19_01356	0.63	-1.0
1,410,857	-		MPMX19_01356	0.63	-0.6
1,410,857	-		MPMX19_01356	0.63	-0.7
1,410,857	-		MPMX19_01356	0.63	+0.7
1,410,857	-		MPMX19_01356	0.63	-1.0
1,410,857	-		MPMX19_01356	0.63	-0.7
1,410,857	-		MPMX19_01356	0.63	-2.1
1,410,857	-		MPMX19_01356	0.63	-0.9
1,410,857	-		MPMX19_01356	0.63	-0.3
1,410,857	-		MPMX19_01356	0.63	-2.1
1,410,857	-		MPMX19_01356	0.63	+0.3
1,410,857	-		MPMX19_01356	0.63	+0.7
1,410,857	-		MPMX19_01356	0.63	+1.2
1,410,857	-		MPMX19_01356	0.63	-0.4
1,410,857	-		MPMX19_01356	0.63	-0.5
1,410,857	-		MPMX19_01356	0.63	-0.6
1,411,058	+				+0.3
1,411,058	+				-1.3
1,411,058	+				-1.5
1,411,059	-				-1.1
1,411,059	-				-2.5
1,411,130	-				+0.1
1,411,130	-				-0.1
1,411,130	-				+0.5
1,411,130	-				-0.7
1,411,130	-				-1.6
1,411,130	-				-0.6
1,411,130	-				-0.3
1,411,130	-				+0.4
1,411,130	-				-1.7
1,411,130	-				-0.3
1,411,130	-				-0.5
1,411,130	-				-0.5
1,411,960	+		MPMX19_01358	0.11	+0.3
1,411,960	+		MPMX19_01358	0.11	-2.6
1,411,960	+		MPMX19_01358	0.11	+1.2
1,411,960	+		MPMX19_01358	0.11	-0.4
1,411,960	+		MPMX19_01358	0.11	+0.2
1,411,960	+		MPMX19_01358	0.11	+0.4
1,412,023	-		MPMX19_01358	0.18	+0.8
1,412,624	+		MPMX19_01358	0.82	-1.7
1,412,624	+		MPMX19_01358	0.82	-1.6
1,412,624	+		MPMX19_01358	0.82	-0.5
1,412,624	+		MPMX19_01358	0.82	+0.5
1,412,624	+		MPMX19_01358	0.82	-1.0
1,412,624	+		MPMX19_01358	0.82	-0.1