Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01304

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,361,288	-				-1.0
1,361,288	-				-1.0
1,361,288	-				+0.3
1,361,288	-				-1.0
1,361,288	-				-0.7
1,361,315	-				-1.5
1,361,315	-				-1.1
1,361,315	-				-0.6
1,361,315	-				-1.8
1,361,315	-				-1.6
1,361,315	-				-0.9
1,361,317	-				+1.0
1,361,317	-				-0.8
1,361,317	-				-0.6
1,361,317	-				-1.2
1,361,317	-				-1.1
1,361,317	-				-3.0
1,361,317	-				-1.0
1,361,317	-				-0.9
1,361,318	+				-0.1
1,361,318	+				+0.1
1,361,318	+				+1.3
1,361,318	+				+0.0
1,361,318	+				-1.1
1,361,318	+				-1.8
1,361,318	+				-1.3
1,361,318	+				-1.1
1,361,318	+				-1.8
1,361,318	+				-1.4
1,361,318	+				+0.3
1,361,318	+				-0.6
1,361,318	+				-0.3
1,361,318	+				-0.9
1,361,318	+				-0.8
1,361,318	+				-1.7
1,361,318	+				-0.6
1,361,318	+				+0.1
1,361,318	+				-0.9
1,361,318	+				-1.5
1,361,319	-				-1.1
1,361,319	-				-0.8
1,361,319	-				+0.3
1,361,319	-				-1.2
1,361,319	-				-0.8
1,361,319	-				+0.3
1,361,319	-				-2.1
1,361,319	-				-0.6
1,361,319	-				+0.5
1,361,319	-				-1.9
1,361,319	-				-0.6
1,361,319	-				-1.9
1,361,319	-				-0.9
1,361,319	-				-0.8
1,361,338	+				-1.2
1,361,339	-				-2.2
1,361,339	-				-1.1
1,361,357	+				-2.0
1,361,357	+				+0.7
1,361,357	+				-0.2
1,361,357	+				-1.3
1,361,357	+				+0.7
1,361,357	+				-0.6
1,361,357	+				-0.3
1,361,357	+				-0.9
1,361,357	+				-1.0
1,361,357	+				-1.1
1,361,357	+				-0.3
1,361,357	+				-1.4
1,361,357	+				-1.5
1,361,358	-				-0.5
1,361,358	-				-1.6
1,361,358	-				-2.2
1,361,358	-				-0.6
1,361,358	-				+0.2
1,361,358	-				-1.6
1,361,358	-				-1.5
1,361,358	-				-0.2
1,361,358	-				-2.5
1,361,358	-				-2.3
1,361,358	-				-0.1
1,361,359	+				-1.9
1,361,359	+				+0.1
1,361,359	+				-1.1
1,361,359	+				-1.2
1,361,359	+				-1.4
1,361,359	+				-0.8
1,361,359	+				-0.6
1,361,359	+				+0.4
1,361,359	+				+1.0
1,361,360	-				+0.4
1,361,360	-				-0.9
1,361,360	-				-2.2
1,361,360	-				-3.1
1,361,360	-				-0.6
1,361,375	+				-0.6
1,361,375	+				-0.9
1,361,375	+				+0.0
1,361,375	+				-2.5
1,361,375	+				-1.6
1,361,376	-				+0.2
1,361,376	-				-0.5
1,361,376	-				-0.2
1,361,675	+		MPMX19_01304	0.29	-1.8
1,361,675	+		MPMX19_01304	0.29	-1.2
1,361,675	+		MPMX19_01304	0.29	-0.6
1,361,675	+		MPMX19_01304	0.29	-0.7
1,361,675	+		MPMX19_01304	0.29	-0.2
1,361,676	-		MPMX19_01304	0.29	+0.1
1,361,676	-		MPMX19_01304	0.29	-1.0
1,361,676	-		MPMX19_01304	0.29	-2.1
1,361,676	-		MPMX19_01304	0.29	-0.8
1,361,676	-		MPMX19_01304	0.29	-1.5
1,361,678	+		MPMX19_01304	0.30	-1.8
1,361,678	+		MPMX19_01304	0.30	-1.9
1,361,678	+		MPMX19_01304	0.30	+0.1
1,361,678	+		MPMX19_01304	0.30	+0.5
1,361,678	+		MPMX19_01304	0.30	-0.6
1,361,678	+		MPMX19_01304	0.30	-1.0
1,361,678	+		MPMX19_01304	0.30	+0.1
1,361,679	-		MPMX19_01304	0.30	-0.7
1,361,679	-		MPMX19_01304	0.30	-0.9
1,361,679	-		MPMX19_01304	0.30	+0.2
1,361,798	+		MPMX19_01304	0.41	-0.8
1,361,798	+		MPMX19_01304	0.41	-1.7
1,361,798	+		MPMX19_01304	0.41	-2.3
1,361,798	+		MPMX19_01304	0.41	-0.4
1,361,798	+		MPMX19_01304	0.41	-1.0
1,361,798	+		MPMX19_01304	0.41	-1.6
1,361,798	+		MPMX19_01304	0.41	+0.2
1,361,798	+		MPMX19_01304	0.41	-1.4
1,361,798	+		MPMX19_01304	0.41	-0.1
1,361,798	+		MPMX19_01304	0.41	-0.4
1,361,798	+		MPMX19_01304	0.41	-1.8
1,361,799	-		MPMX19_01304	0.41	-2.6
1,361,799	-		MPMX19_01304	0.41	-0.6
1,361,799	-		MPMX19_01304	0.41	+0.1
1,361,799	-		MPMX19_01304	0.41	-1.8
1,361,799	-		MPMX19_01304	0.41	-0.8
1,361,799	-		MPMX19_01304	0.41	-1.5
1,361,799	-		MPMX19_01304	0.41	+0.5
1,361,799	-		MPMX19_01304	0.41	-1.8
1,361,799	-		MPMX19_01304	0.41	-1.1
1,361,799	-		MPMX19_01304	0.41	-1.0
1,361,799	-		MPMX19_01304	0.41	-0.6
1,361,799	-		MPMX19_01304	0.41	-0.2
1,361,799	-		MPMX19_01304	0.41	-0.4
1,361,813	+		MPMX19_01304	0.42	+0.1
1,361,813	+		MPMX19_01304	0.42	-0.5
1,361,814	-		MPMX19_01304	0.42	-1.2
1,361,814	-		MPMX19_01304	0.42	-1.3
1,361,814	-		MPMX19_01304	0.42	-1.0
1,361,814	-		MPMX19_01304	0.42	-1.1
1,361,975	+		MPMX19_01304	0.58	+0.1
1,361,976	-		MPMX19_01304	0.58	-1.8
1,362,044	+		MPMX19_01304	0.64	-1.8
1,362,044	+		MPMX19_01304	0.64	-1.3
1,362,044	+		MPMX19_01304	0.64	-0.0
1,362,044	+		MPMX19_01304	0.64	-0.4
1,362,044	+		MPMX19_01304	0.64	-0.7
1,362,044	+		MPMX19_01304	0.64	-1.0
1,362,044	+		MPMX19_01304	0.64	-0.6
1,362,044	+		MPMX19_01304	0.64	-0.3
1,362,044	+		MPMX19_01304	0.64	-1.1
1,362,044	+		MPMX19_01304	0.64	-0.7
1,362,044	+		MPMX19_01304	0.64	-1.1
1,362,045	-		MPMX19_01304	0.64	-1.6
1,362,045	-		MPMX19_01304	0.64	+0.1
1,362,045	-		MPMX19_01304	0.64	-2.4
1,362,045	-		MPMX19_01304	0.64	+0.4
1,362,045	-		MPMX19_01304	0.64	-1.3
1,362,045	-		MPMX19_01304	0.64	-1.8
1,362,045	-		MPMX19_01304	0.64	-0.3
1,362,045	-		MPMX19_01304	0.64	-1.0
1,362,045	-		MPMX19_01304	0.64	-0.7
1,362,045	-		MPMX19_01304	0.64	-0.9
1,362,045	-		MPMX19_01304	0.64	-0.6
1,362,045	-		MPMX19_01304	0.64	-0.4
1,362,045	-		MPMX19_01304	0.64	-1.3
1,362,045	-		MPMX19_01304	0.64	-1.4
1,362,234	-		MPMX19_01304	0.82	-1.3
1,362,234	-		MPMX19_01304	0.82	-1.9
1,362,422	+				+0.1
1,362,433	+				-0.6
1,362,433	+				-0.6
1,362,433	+				-0.9
1,362,433	+				-1.3
1,362,433	+				+0.0
1,362,434	-				-1.0
1,362,869	+		MPMX19_01305	0.64	-0.1
1,362,869	+		MPMX19_01305	0.64	-1.5
1,362,870	-		MPMX19_01305	0.64	+0.5
1,362,870	-		MPMX19_01305	0.64	-0.3
1,362,873	+		MPMX19_01305	0.64	-1.8
1,362,874	-		MPMX19_01305	0.64	-0.1
1,363,109	+				-1.1
1,363,110	-				-1.3
1,363,110	-				+0.7
1,363,110	-				-2.1
1,363,377	+				-0.8
1,363,377	+				-0.0
1,363,377	+				+0.7
1,363,378	-				-1.8
1,363,378	-				-0.3