Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01193

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,241,119	+		MPMX19_01192	0.82	-1.1
1,241,440	-				-0.1
1,241,440	-				-2.4
1,241,440	-				-0.6
1,241,440	-				-0.5
1,241,442	-				-0.4
1,241,442	-				-0.3
1,241,442	-				+0.1
1,241,442	-				-0.1
1,241,442	-				-1.1
1,241,442	-				-0.6
1,241,442	-				+0.4
1,241,442	-				-0.2
1,241,442	-				-1.5
1,241,442	-				-0.0
1,241,442	-				+0.6
1,241,442	-				-0.8
1,241,442	-				-0.1
1,241,442	-				-0.5
1,241,442	-				-3.0
1,241,501	-				-0.6
1,241,501	-				-0.5
1,241,501	-				-0.3
1,241,501	-				-1.8
1,241,501	-				-0.1
1,241,501	-				-0.3
1,241,501	-				-1.7
1,241,501	-				+0.8
1,241,501	-				-1.2
1,241,501	-				+0.1
1,241,501	-				-0.3
1,241,501	-				+0.1
1,241,504	+				+1.3
1,241,505	-				-1.4
1,241,505	-				-1.0
1,241,505	-				+1.1
1,241,505	-				+0.5
1,241,505	-				-2.9
1,241,505	-				-0.5
1,241,505	-				-0.3
1,241,505	-				-0.5
1,241,505	-				-0.9
1,241,505	-				+0.5
1,241,505	-				+0.0
1,241,505	-				+0.4
1,241,505	-				+0.1
1,241,505	-				-0.5
1,241,505	-				-0.6
1,241,505	-				-2.3
1,241,505	-				-0.9
1,241,505	-				-0.8
1,241,505	-				+0.7
1,241,505	-				-0.1
1,241,505	-				-1.5
1,241,505	-				+0.5
1,241,505	-				-1.1
1,241,505	-				-0.1
1,241,505	-				-0.7
1,241,505	-				+0.1
1,241,505	-				-0.4
1,241,505	-				-0.6
1,241,505	-				+0.0
1,241,572	+				+1.0
1,241,572	+				-0.3
1,241,573	-				+0.0
1,241,573	-				-2.1
1,241,573	-				-1.0
1,241,573	-				+1.7
1,241,573	-				-1.0
1,241,573	-				-0.9
1,241,573	-				+0.2
1,241,573	-				-1.9
1,241,573	-				-0.6
1,241,573	-				-1.2
1,242,657	-				-1.6
1,242,686	-				-0.3
1,242,801	-				-1.9
1,242,801	-				-0.7
1,242,801	-				-0.5
1,242,801	-				+2.7
1,242,839	-				-2.3
1,242,860	-				-0.8
1,242,860	-				-0.2
1,242,860	-				-0.3
1,242,860	-				-1.3
1,242,892	-				-0.9
1,242,941	+				-0.3
1,242,941	+				-0.6
1,242,941	+				+0.4
1,242,941	+				-0.2
1,242,941	+				-0.8
1,242,941	+				-0.8
1,242,941	+				+1.9
1,242,941	+				+0.8
1,242,941	+				-0.6
1,242,941	+				-1.2
1,242,941	+				-1.1
1,242,941	+				+0.4
1,242,942	-				-0.1
1,242,942	-				-1.7
1,242,942	-				-1.3
1,242,942	-				-1.7
1,242,942	-				+0.7
1,242,942	-				-1.3
1,242,942	-				-0.7
1,242,942	-				-1.9
1,242,942	-				-1.8
1,242,942	-				-1.0
1,242,942	-				-1.8
1,242,963	+				+0.6
1,242,963	+				-1.3
1,242,963	+				-2.6
1,242,964	-				-0.9
1,242,964	-				-0.4
1,242,964	-				-0.9
1,242,964	-				-1.3
1,242,964	-				-0.1
1,242,964	-				-1.5
1,242,964	-				-1.9
1,242,964	-				-0.2
1,242,976	+				-0.6
1,242,976	+				-0.8
1,242,977	-				-0.9
1,242,977	-				-1.4
1,243,050	+				-0.0
1,243,050	+				-0.1
1,243,050	+				-0.5
1,243,084	-				-0.8
1,243,084	-				+0.6
1,243,084	-				-1.8
1,243,084	-				-0.4
1,243,152	+		MPMX19_01194	0.10	+1.3
1,243,485	+		MPMX19_01194	0.23	-0.9
1,243,485	+		MPMX19_01194	0.23	-1.6
1,243,485	+		MPMX19_01194	0.23	-1.1
1,243,485	+		MPMX19_01194	0.23	-0.9
1,243,485	+		MPMX19_01194	0.23	-3.2
1,243,485	+		MPMX19_01194	0.23	+1.1
1,243,485	+		MPMX19_01194	0.23	-0.5
1,243,485	+		MPMX19_01194	0.23	+0.1
1,243,485	+		MPMX19_01194	0.23	-1.3
1,243,485	+		MPMX19_01194	0.23	-1.0
1,243,485	+		MPMX19_01194	0.23	+0.3
1,243,485	+		MPMX19_01194	0.23	-0.2
1,243,485	+		MPMX19_01194	0.23	+0.4
1,243,485	+		MPMX19_01194	0.23	-0.9
1,243,485	+		MPMX19_01194	0.23	-0.9
1,243,485	+		MPMX19_01194	0.23	-0.8
1,243,486	-		MPMX19_01194	0.23	-0.1
1,243,486	-		MPMX19_01194	0.23	+0.2
1,243,486	-		MPMX19_01194	0.23	-0.3
1,243,486	-		MPMX19_01194	0.23	-2.3
1,243,486	-		MPMX19_01194	0.23	-0.8
1,243,486	-		MPMX19_01194	0.23	-0.2
1,243,486	-		MPMX19_01194	0.23	+0.9
1,243,486	-		MPMX19_01194	0.23	-0.5
1,243,486	-		MPMX19_01194	0.23	+1.3
1,243,486	-		MPMX19_01194	0.23	-3.1
1,243,486	-		MPMX19_01194	0.23	-1.4
1,243,486	-		MPMX19_01194	0.23	+0.1
1,243,486	-		MPMX19_01194	0.23	-1.1
1,243,486	-		MPMX19_01194	0.23	-0.5
1,243,486	-		MPMX19_01194	0.23	-1.0
1,243,486	-		MPMX19_01194	0.23	-0.2
1,243,486	-		MPMX19_01194	0.23	-0.4
1,243,486	-		MPMX19_01194	0.23	-0.6
1,243,486	-		MPMX19_01194	0.23	+0.5
1,243,486	-		MPMX19_01194	0.23	-0.2
1,243,486	-		MPMX19_01194	0.23	-1.8
1,243,486	-		MPMX19_01194	0.23	-0.4
1,243,590	+		MPMX19_01194	0.28	-2.3
1,243,590	+		MPMX19_01194	0.28	-0.3
1,243,590	+		MPMX19_01194	0.28	+0.1
1,243,590	+		MPMX19_01194	0.28	+0.0
1,243,590	+		MPMX19_01194	0.28	-1.5
1,243,590	+		MPMX19_01194	0.28	-0.3
1,243,591	-		MPMX19_01194	0.28	-0.9
1,243,591	-		MPMX19_01194	0.28	-1.5
1,243,591	-		MPMX19_01194	0.28	-0.5
1,243,591	-		MPMX19_01194	0.28	+0.7
1,243,591	-		MPMX19_01194	0.28	-1.5
1,243,591	-		MPMX19_01194	0.28	-1.5
1,243,591	-		MPMX19_01194	0.28	+0.5