Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01146 and MPMX19_01147 are separated by 433 nucleotides MPMX19_01147 and MPMX19_01148 are separated by 70 nucleotides
MPMX19_01146: MPMX19_01146 - hypothetical protein, at 1,181,787 to 1,182,998
_01146
MPMX19_01147: MPMX19_01147 - A-factor type gamma-butyrolactone 1'-reductase (1S-forming), at 1,183,432 to 1,184,196
_01147
MPMX19_01148: MPMX19_01148 - Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, at 1,184,267 to 1,185,835
_01148
Position (kb)
1183
1184
1185 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.877 kb on + strand at 1182.877 kb on + strand at 1182.878 kb on - strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.986 kb on + strand at 1182.986 kb on + strand at 1182.986 kb on + strand at 1183.100 kb on + strand at 1183.100 kb on + strand at 1183.100 kb on + strand at 1183.101 kb on - strand at 1183.101 kb on - strand at 1183.101 kb on - strand at 1183.177 kb on + strand at 1183.177 kb on + strand at 1183.177 kb on + strand at 1183.177 kb on + strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.285 kb on + strand at 1183.330 kb on + strand at 1183.331 kb on - strand at 1183.331 kb on - strand at 1183.771 kb on - strand, within MPMX19_01147 at 1183.771 kb on - strand, within MPMX19_01147 at 1183.873 kb on - strand, within MPMX19_01147 at 1183.873 kb on - strand, within MPMX19_01147 at 1183.901 kb on - strand, within MPMX19_01147 at 1183.954 kb on + strand, within MPMX19_01147 at 1183.954 kb on + strand, within MPMX19_01147 at 1183.954 kb on + strand, within MPMX19_01147 at 1183.954 kb on + strand, within MPMX19_01147 at 1183.954 kb on + strand, within MPMX19_01147 at 1183.955 kb on - strand, within MPMX19_01147 at 1183.955 kb on - strand, within MPMX19_01147 at 1184.005 kb on - strand, within MPMX19_01147 at 1184.085 kb on + strand, within MPMX19_01147 at 1184.085 kb on + strand, within MPMX19_01147 at 1184.085 kb on + strand, within MPMX19_01147 at 1184.085 kb on + strand, within MPMX19_01147 at 1184.085 kb on + strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.117 kb on - strand, within MPMX19_01147 at 1184.254 kb on + strand at 1184.254 kb on + strand at 1184.255 kb on - strand at 1184.255 kb on - strand at 1184.255 kb on - strand at 1184.268 kb on + strand at 1184.571 kb on + strand, within MPMX19_01148 at 1184.571 kb on + strand, within MPMX19_01148 at 1184.634 kb on + strand, within MPMX19_01148 at 1184.635 kb on - strand, within MPMX19_01148 at 1184.878 kb on - strand, within MPMX19_01148 at 1184.878 kb on - strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.118 kb on + strand, within MPMX19_01148 at 1185.118 kb on + strand, within MPMX19_01148 at 1185.118 kb on + strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.160 kb on - strand, within MPMX19_01148
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 1,182,613 + MPMX19_01146 0.68 -1.0 1,182,613 + MPMX19_01146 0.68 +0.5 1,182,613 + MPMX19_01146 0.68 -0.4 1,182,613 + MPMX19_01146 0.68 -0.2 1,182,613 + MPMX19_01146 0.68 +0.6 1,182,613 + MPMX19_01146 0.68 -1.3 1,182,613 + MPMX19_01146 0.68 +0.2 1,182,613 + MPMX19_01146 0.68 +1.7 1,182,613 + MPMX19_01146 0.68 -2.1 1,182,613 + MPMX19_01146 0.68 -0.2 1,182,613 + MPMX19_01146 0.68 -2.4 1,182,613 + MPMX19_01146 0.68 +0.5 1,182,613 + MPMX19_01146 0.68 +0.3 1,182,613 + MPMX19_01146 0.68 +0.1 1,182,613 + MPMX19_01146 0.68 -0.3 1,182,613 + MPMX19_01146 0.68 -0.0 1,182,614 - MPMX19_01146 0.68 -0.4 1,182,614 - MPMX19_01146 0.68 -1.5 1,182,614 - MPMX19_01146 0.68 -0.1 1,182,614 - MPMX19_01146 0.68 -1.3 1,182,614 - MPMX19_01146 0.68 +0.1 1,182,614 - MPMX19_01146 0.68 -1.8 1,182,614 - MPMX19_01146 0.68 -0.1 1,182,614 - MPMX19_01146 0.68 -0.4 1,182,614 - MPMX19_01146 0.68 -0.7 1,182,614 - MPMX19_01146 0.68 -0.8 1,182,614 - MPMX19_01146 0.68 -0.5 1,182,614 - MPMX19_01146 0.68 -2.5 1,182,614 - MPMX19_01146 0.68 -1.9 1,182,614 - MPMX19_01146 0.68 -0.9 1,182,614 - MPMX19_01146 0.68 +0.5 1,182,614 - MPMX19_01146 0.68 -0.6 1,182,877 + -0.9 1,182,877 + -0.5 1,182,878 - +0.0 1,182,904 + -0.8 1,182,904 + -0.5 1,182,904 + -0.7 1,182,904 + -1.6 1,182,904 + -0.7 1,182,904 + -0.4 1,182,904 + -1.2 1,182,904 + +0.1 1,182,904 + -1.5 1,182,904 + -0.3 1,182,904 + -1.0 1,182,905 - +0.1 1,182,905 - -1.0 1,182,905 - -1.1 1,182,905 - +0.3 1,182,905 - +0.1 1,182,905 - -0.3 1,182,905 - -0.9 1,182,905 - -1.4 1,182,905 - -0.6 1,182,905 - -0.9 1,182,905 - -0.4 1,182,905 - +1.4 1,182,986 + -0.1 1,182,986 + -1.3 1,182,986 + -0.7 1,183,100 + -0.9 1,183,100 + -0.8 1,183,100 + -0.4 1,183,101 - -0.2 1,183,101 - -0.6 1,183,101 - +0.0 1,183,177 + -0.0 1,183,177 + +1.4 1,183,177 + -0.1 1,183,177 + -0.8 1,183,178 - -0.3 1,183,178 - -0.1 1,183,178 - +0.4 1,183,178 - -1.8 1,183,178 - +0.3 1,183,178 - -1.3 1,183,178 - -0.5 1,183,178 - -1.1 1,183,250 + -0.2 1,183,250 + -0.6 1,183,250 + +0.2 1,183,250 + -1.3 1,183,250 + -1.1 1,183,250 + +2.3 1,183,250 + +1.2 1,183,250 + -0.5 1,183,250 + -0.7 1,183,250 + +0.3 1,183,250 + -0.3 1,183,250 + -0.8 1,183,251 - -0.4 1,183,251 - -0.0 1,183,251 - -0.2 1,183,251 - +1.3 1,183,251 - -1.2 1,183,251 - +0.4 1,183,251 - -0.3 1,183,251 - +0.4 1,183,251 - -0.3 1,183,251 - -0.4 1,183,251 - -1.3 1,183,251 - -1.3 1,183,285 + +0.7 1,183,330 + -0.6 1,183,331 - -0.4 1,183,331 - +0.3 1,183,771 - MPMX19_01147 0.44 -0.3 1,183,771 - MPMX19_01147 0.44 -0.5 1,183,873 - MPMX19_01147 0.58 -0.1 1,183,873 - MPMX19_01147 0.58 -0.2 1,183,901 - MPMX19_01147 0.61 +1.1 1,183,954 + MPMX19_01147 0.68 -0.9 1,183,954 + MPMX19_01147 0.68 -0.8 1,183,954 + MPMX19_01147 0.68 -1.3 1,183,954 + MPMX19_01147 0.68 -0.9 1,183,954 + MPMX19_01147 0.68 -0.8 1,183,955 - MPMX19_01147 0.68 -0.1 1,183,955 - MPMX19_01147 0.68 -0.5 1,184,005 - MPMX19_01147 0.75 -2.1 1,184,085 + MPMX19_01147 0.85 -1.2 1,184,085 + MPMX19_01147 0.85 -1.1 1,184,085 + MPMX19_01147 0.85 -0.2 1,184,085 + MPMX19_01147 0.85 -0.9 1,184,085 + MPMX19_01147 0.85 -0.1 1,184,086 - MPMX19_01147 0.85 +0.9 1,184,086 - MPMX19_01147 0.85 -1.3 1,184,086 - MPMX19_01147 0.85 +0.3 1,184,086 - MPMX19_01147 0.85 -1.4 1,184,086 - MPMX19_01147 0.85 -0.9 1,184,086 - MPMX19_01147 0.85 -0.9 1,184,086 - MPMX19_01147 0.85 +0.4 1,184,086 - MPMX19_01147 0.85 -0.5 1,184,086 - MPMX19_01147 0.85 +0.5 1,184,086 - MPMX19_01147 0.85 -1.1 1,184,116 + MPMX19_01147 0.89 +0.4 1,184,116 + MPMX19_01147 0.89 -0.9 1,184,116 + MPMX19_01147 0.89 -1.1 1,184,116 + MPMX19_01147 0.89 -1.6 1,184,116 + MPMX19_01147 0.89 -0.9 1,184,116 + MPMX19_01147 0.89 -0.9 1,184,116 + MPMX19_01147 0.89 +0.4 1,184,117 - MPMX19_01147 0.90 -0.0 1,184,254 + -1.3 1,184,254 + +0.1 1,184,255 - +0.3 1,184,255 - -0.7 1,184,255 - +1.4 1,184,268 + -0.7 1,184,571 + MPMX19_01148 0.19 -1.4 1,184,571 + MPMX19_01148 0.19 -1.3 1,184,634 + MPMX19_01148 0.23 +0.7 1,184,635 - MPMX19_01148 0.23 +0.0 1,184,878 - MPMX19_01148 0.39 -0.3 1,184,878 - MPMX19_01148 0.39 -0.1 1,185,078 + MPMX19_01148 0.52 -2.2 1,185,078 + MPMX19_01148 0.52 +0.9 1,185,078 + MPMX19_01148 0.52 -0.5 1,185,078 + MPMX19_01148 0.52 +0.4 1,185,078 + MPMX19_01148 0.52 -0.6 1,185,078 + MPMX19_01148 0.52 +0.7 1,185,078 + MPMX19_01148 0.52 -0.7 1,185,078 + MPMX19_01148 0.52 +1.1 1,185,078 + MPMX19_01148 0.52 -1.6 1,185,078 + MPMX19_01148 0.52 -0.1 1,185,078 + MPMX19_01148 0.52 -1.9 1,185,078 + MPMX19_01148 0.52 +0.3 1,185,079 - MPMX19_01148 0.52 +0.6 1,185,079 - MPMX19_01148 0.52 -1.0 1,185,079 - MPMX19_01148 0.52 +1.1 1,185,079 - MPMX19_01148 0.52 -0.1 1,185,079 - MPMX19_01148 0.52 +1.7 1,185,079 - MPMX19_01148 0.52 -1.8 1,185,079 - MPMX19_01148 0.52 -1.1 1,185,079 - MPMX19_01148 0.52 +1.7 1,185,079 - MPMX19_01148 0.52 +0.7 1,185,079 - MPMX19_01148 0.52 -0.3 1,185,079 - MPMX19_01148 0.52 -1.1 1,185,079 - MPMX19_01148 0.52 -0.1 1,185,118 + MPMX19_01148 0.54 -0.3 1,185,118 + MPMX19_01148 0.54 -0.9 1,185,118 + MPMX19_01148 0.54 +0.4 1,185,119 - MPMX19_01148 0.54 +1.0 1,185,119 - MPMX19_01148 0.54 +0.1 1,185,119 - MPMX19_01148 0.54 -2.2 1,185,119 - MPMX19_01148 0.54 -1.3 1,185,119 - MPMX19_01148 0.54 +0.1 1,185,119 - MPMX19_01148 0.54 -0.9 1,185,119 - MPMX19_01148 0.54 +0.2 1,185,160 - MPMX19_01148 0.57 +0.5
Or see this region's nucleotide sequence