Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01112

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,145,429	+		MPMX19_01111	0.59	+0.9
1,145,446	+		MPMX19_01111	0.60	-1.8
1,145,446	+		MPMX19_01111	0.60	-1.1
1,145,572	+		MPMX19_01111	0.71	-2.6
1,145,572	+		MPMX19_01111	0.71	-0.3
1,145,572	+		MPMX19_01111	0.71	-0.2
1,145,572	+		MPMX19_01111	0.71	-2.0
1,145,572	+		MPMX19_01111	0.71	+0.1
1,145,572	+		MPMX19_01111	0.71	-1.9
1,145,830	+				-0.0
1,145,830	+				-0.1
1,145,830	+				-0.6
1,145,830	+				-0.8
1,145,830	+				+0.3
1,145,830	+				+0.1
1,145,830	+				-2.2
1,145,830	+				-0.4
1,145,830	+				-0.3
1,145,830	+				-0.5
1,145,830	+				-2.0
1,145,845	+				+0.8
1,145,845	+				-1.2
1,145,845	+				+2.1
1,145,845	+				-1.4
1,145,845	+				+0.5
1,145,845	+				+0.1
1,145,845	+				+0.1
1,146,748	+		MPMX19_01112	0.57	-0.6
1,146,748	+		MPMX19_01112	0.57	-1.1
1,146,748	+		MPMX19_01112	0.57	-1.8
1,147,368	+				-2.3
1,147,368	+				-0.2
1,147,368	+				+0.1
1,147,368	+				-0.9
1,147,369	-				-0.8
1,147,481	+				+0.9
1,147,481	+				+0.1
1,147,481	+				-0.9
1,147,481	+				-0.3
1,147,482	-				-0.1
1,147,482	-				-0.4
1,147,482	-				-0.4
1,147,482	-				-0.6
1,147,482	-				-0.4
1,147,482	-				-0.4
1,147,482	-				-1.3
1,147,482	-				-0.5
1,147,482	-				-2.8
1,147,482	-				-1.6
1,147,482	-				-1.4
1,147,517	+				+0.9
1,147,518	-				-2.1
1,147,595	+				-0.4
1,147,748	+				-0.3
1,147,748	+				-0.3
1,147,748	+				+1.7
1,147,748	+				+0.5
1,147,748	+				+0.5
1,147,748	+				-2.2
1,147,748	+				+0.9
1,147,748	+				-0.9
1,147,997	+		MPMX19_01113	0.17	-1.5
1,147,997	+		MPMX19_01113	0.17	-0.3
1,147,997	+		MPMX19_01113	0.17	-1.1
1,147,997	+		MPMX19_01113	0.17	-0.6
1,147,997	+		MPMX19_01113	0.17	+1.1
1,148,072	+		MPMX19_01113	0.20	-1.6
1,148,264	+		MPMX19_01113	0.28	-0.6
1,148,266	+		MPMX19_01113	0.28	+0.5
1,148,266	+		MPMX19_01113	0.28	+0.1
1,148,266	+		MPMX19_01113	0.28	+0.7