Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01107

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,140,108	+				-0.5
1,140,108	+				-0.8
1,140,109	-				+0.1
1,140,109	-				+0.1
1,140,109	-				-0.3
1,140,553	+				-0.5
1,140,553	+				-1.1
1,140,749	+		MPMX19_01106	0.69	-1.0
1,140,822	+				+0.2
1,140,822	+				-0.4
1,140,947	+		MPMX19_01107	0.19	-1.5
1,140,947	+		MPMX19_01107	0.19	+0.8
1,140,947	+		MPMX19_01107	0.19	+0.6
1,140,947	+		MPMX19_01107	0.19	+0.1
1,140,947	+		MPMX19_01107	0.19	-1.9
1,140,947	+		MPMX19_01107	0.19	-1.5
1,140,947	+		MPMX19_01107	0.19	+0.9
1,140,947	+		MPMX19_01107	0.19	+1.0
1,140,947	+		MPMX19_01107	0.19	-1.6
1,140,947	+		MPMX19_01107	0.19	+0.3
1,140,948	-		MPMX19_01107	0.19	-1.6
1,140,948	-		MPMX19_01107	0.19	-0.5
1,140,948	-		MPMX19_01107	0.19	-0.8
1,140,948	-		MPMX19_01107	0.19	+1.1
1,140,948	-		MPMX19_01107	0.19	-0.6
1,140,948	-		MPMX19_01107	0.19	-0.8
1,140,948	-		MPMX19_01107	0.19	+0.7
1,140,948	-		MPMX19_01107	0.19	+0.8
1,140,948	-		MPMX19_01107	0.19	-1.6
1,140,948	-		MPMX19_01107	0.19	+0.3
1,140,948	-		MPMX19_01107	0.19	+0.1
1,140,948	-		MPMX19_01107	0.19	+0.4
1,140,948	-		MPMX19_01107	0.19	-0.4
1,140,992	+		MPMX19_01107	0.28	+0.9
1,140,992	+		MPMX19_01107	0.28	-0.2
1,140,992	+		MPMX19_01107	0.28	+1.3
1,140,992	+		MPMX19_01107	0.28	-2.4
1,140,992	+		MPMX19_01107	0.28	-0.3
1,140,992	+		MPMX19_01107	0.28	-1.9
1,140,992	+		MPMX19_01107	0.28	-1.8
1,140,992	+		MPMX19_01107	0.28	-1.0
1,140,992	+		MPMX19_01107	0.28	-2.7
1,140,992	+		MPMX19_01107	0.28	-0.1
1,140,992	+		MPMX19_01107	0.28	+0.7
1,140,992	+		MPMX19_01107	0.28	-0.1
1,140,992	+		MPMX19_01107	0.28	-0.7
1,140,992	+		MPMX19_01107	0.28	-0.5
1,140,992	+		MPMX19_01107	0.28	-1.5
1,140,993	-		MPMX19_01107	0.28	-0.6
1,140,993	-		MPMX19_01107	0.28	+0.0
1,140,993	-		MPMX19_01107	0.28	+0.5
1,140,993	-		MPMX19_01107	0.28	-2.4
1,140,993	-		MPMX19_01107	0.28	-0.5
1,140,993	-		MPMX19_01107	0.28	+0.0
1,140,993	-		MPMX19_01107	0.28	-0.4
1,140,993	-		MPMX19_01107	0.28	-1.1
1,140,993	-		MPMX19_01107	0.28	-0.4
1,140,993	-		MPMX19_01107	0.28	-0.9
1,140,993	-		MPMX19_01107	0.28	-0.8
1,140,993	-		MPMX19_01107	0.28	+0.4
1,140,993	-		MPMX19_01107	0.28	+0.7
1,140,993	-		MPMX19_01107	0.28	+1.3
1,141,187	+		MPMX19_01107	0.67	+1.4
1,141,187	+		MPMX19_01107	0.67	-0.0
1,141,187	+		MPMX19_01107	0.67	+0.0
1,141,187	+		MPMX19_01107	0.67	+1.5
1,141,187	+		MPMX19_01107	0.67	+0.4
1,141,187	+		MPMX19_01107	0.67	+1.5
1,141,187	+		MPMX19_01107	0.67	+0.3
1,141,187	+		MPMX19_01107	0.67	-0.4
1,141,187	+		MPMX19_01107	0.67	-0.6
1,141,188	-		MPMX19_01107	0.67	-0.8
1,141,188	-		MPMX19_01107	0.67	+0.5
1,141,188	-		MPMX19_01107	0.67	+0.2
1,141,188	-		MPMX19_01107	0.67	+0.3
1,141,188	-		MPMX19_01107	0.67	-1.2
1,141,188	-		MPMX19_01107	0.67	+0.4
1,141,188	-		MPMX19_01107	0.67	-3.0
1,141,188	-		MPMX19_01107	0.67	-0.3
1,141,188	-		MPMX19_01107	0.67	-0.3
1,141,228	+		MPMX19_01107	0.75	+0.7
1,141,228	+		MPMX19_01107	0.75	+0.4
1,141,229	-		MPMX19_01107	0.75	-0.9
1,141,229	-		MPMX19_01107	0.75	+0.4
1,141,229	-		MPMX19_01107	0.75	+0.3
1,141,229	-		MPMX19_01107	0.75	-0.8
1,141,229	-		MPMX19_01107	0.75	-0.2
1,141,229	-		MPMX19_01107	0.75	+0.8
1,141,229	-		MPMX19_01107	0.75	-0.1
1,141,229	-		MPMX19_01107	0.75	-0.9
1,141,229	-		MPMX19_01107	0.75	-0.7
1,141,373	+				-1.5
1,141,373	+				-0.7
1,141,373	+				+0.7
1,141,374	-				-0.0
1,141,374	-				-0.2
1,141,391	+				-0.5
1,141,392	-				-0.8
1,141,392	-				-0.4
1,141,392	-				-0.2