Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01090

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,126,274	+		MPMX19_01089	0.42	-0.5
1,126,275	-		MPMX19_01089	0.42	-0.6
1,126,454	+		MPMX19_01089	0.75	-1.3
1,126,454	+		MPMX19_01089	0.75	-0.8
1,126,454	+		MPMX19_01089	0.75	+0.4
1,126,455	-		MPMX19_01089	0.75	-1.1
1,126,455	-		MPMX19_01089	0.75	+1.0
1,126,455	-		MPMX19_01089	0.75	-0.8
1,126,455	-		MPMX19_01089	0.75	-1.3
1,126,493	+		MPMX19_01089	0.83	-0.6
1,126,493	+		MPMX19_01089	0.83	-0.5
1,126,493	+		MPMX19_01089	0.83	+0.5
1,126,493	+		MPMX19_01089	0.83	-0.1
1,126,493	+		MPMX19_01089	0.83	-0.3
1,126,493	+		MPMX19_01089	0.83	+0.3
1,126,493	+		MPMX19_01089	0.83	-0.9
1,126,493	+		MPMX19_01089	0.83	+0.4
1,126,493	+		MPMX19_01089	0.83	+1.0
1,126,493	+		MPMX19_01089	0.83	-0.8
1,126,493	+		MPMX19_01089	0.83	+0.7
1,126,494	-		MPMX19_01089	0.83	-0.5
1,126,494	-		MPMX19_01089	0.83	-1.2
1,126,494	-		MPMX19_01089	0.83	-1.2
1,126,494	-		MPMX19_01089	0.83	-1.0
1,126,494	-		MPMX19_01089	0.83	+0.8
1,126,494	-		MPMX19_01089	0.83	-2.2
1,126,583	+				-1.0
1,126,583	+				-0.2
1,126,583	+				-0.7
1,126,583	+				-0.9
1,126,583	+				-1.5
1,126,583	+				-0.4
1,126,583	+				-0.6
1,126,583	+				-1.3
1,126,583	+				-1.6
1,126,583	+				-0.2
1,126,583	+				+0.9
1,126,583	+				-0.1
1,126,583	+				-0.5
1,126,583	+				+0.2
1,126,583	+				-0.1
1,126,583	+				-1.3
1,126,583	+				+0.1
1,126,583	+				-0.3
1,126,583	+				+0.4
1,126,583	+				-0.5
1,126,583	+				+0.5
1,126,584	-				+0.0
1,126,584	-				+0.1
1,126,584	-				-1.1
1,126,584	-				-0.5
1,126,584	-				-2.0
1,126,584	-				+0.2
1,126,584	-				+0.5
1,126,584	-				+0.0
1,126,584	-				+1.3
1,126,584	-				+0.2
1,126,584	-				+0.7
1,126,584	-				+0.1
1,126,584	-				-0.4
1,126,584	-				-0.3
1,126,624	+				-0.1
1,126,624	+				-1.5
1,126,624	+				+1.3
1,126,624	+				-0.3
1,126,624	+				+0.5
1,126,624	+				-1.0
1,126,624	+				+0.9
1,126,624	+				-0.0
1,126,624	+				-1.1
1,126,624	+				+0.7
1,126,625	-				-1.3
1,126,625	-				-0.0
1,126,625	-				+1.3
1,126,625	-				-2.2
1,126,625	-				-0.5
1,126,625	-				+0.8
1,126,625	-				+0.7
1,126,625	-				+0.1
1,126,625	-				-0.1
1,126,691	+				-1.3
1,126,691	+				-1.7
1,126,692	-				+0.2
1,126,801	+				-0.8
1,126,802	-				+0.1
1,126,802	-				+1.5
1,126,802	-				-0.9
1,126,811	+				-0.3
1,126,811	+				-0.6
1,126,812	-				-0.4
1,126,812	-				-0.6
1,126,853	+				-1.5
1,126,854	-				+0.7
1,126,899	+		MPMX19_01090	0.12	-1.1
1,126,982	+		MPMX19_01090	0.22	-1.1
1,126,982	+		MPMX19_01090	0.22	+0.1
1,126,982	+		MPMX19_01090	0.22	-0.6
1,126,982	+		MPMX19_01090	0.22	-0.4
1,126,982	+		MPMX19_01090	0.22	-0.1
1,126,982	+		MPMX19_01090	0.22	-0.5
1,126,982	+		MPMX19_01090	0.22	-2.8
1,126,982	+		MPMX19_01090	0.22	-1.6
1,126,982	+		MPMX19_01090	0.22	-0.5
1,126,982	+		MPMX19_01090	0.22	-0.6
1,126,982	+		MPMX19_01090	0.22	-0.5
1,126,982	+		MPMX19_01090	0.22	-0.1
1,126,982	+		MPMX19_01090	0.22	-0.6
1,126,982	+		MPMX19_01090	0.22	+0.7
1,126,982	+		MPMX19_01090	0.22	-2.0
1,126,982	+		MPMX19_01090	0.22	-0.8
1,126,982	+		MPMX19_01090	0.22	-0.4
1,126,982	+		MPMX19_01090	0.22	+0.9
1,126,982	+		MPMX19_01090	0.22	-0.3
1,126,982	+		MPMX19_01090	0.22	+0.2
1,126,982	+		MPMX19_01090	0.22	-1.7
1,126,983	-		MPMX19_01090	0.23	-0.4
1,126,983	-		MPMX19_01090	0.23	-1.3
1,126,983	-		MPMX19_01090	0.23	+1.3
1,126,983	-		MPMX19_01090	0.23	-1.1
1,126,983	-		MPMX19_01090	0.23	+0.4
1,126,983	-		MPMX19_01090	0.23	+0.3
1,126,983	-		MPMX19_01090	0.23	-0.4
1,126,983	-		MPMX19_01090	0.23	+0.6
1,126,983	-		MPMX19_01090	0.23	-0.2
1,126,983	-		MPMX19_01090	0.23	+2.3
1,126,983	-		MPMX19_01090	0.23	-0.9
1,126,983	-		MPMX19_01090	0.23	-0.5
1,127,108	+		MPMX19_01090	0.38	-0.4
1,127,108	+		MPMX19_01090	0.38	+0.8
1,127,108	+		MPMX19_01090	0.38	-0.1
1,127,108	+		MPMX19_01090	0.38	-1.0
1,127,108	+		MPMX19_01090	0.38	-2.4
1,127,108	+		MPMX19_01090	0.38	-1.1
1,127,108	+		MPMX19_01090	0.38	-2.0
1,127,108	+		MPMX19_01090	0.38	-2.6
1,127,108	+		MPMX19_01090	0.38	-0.3
1,127,109	-		MPMX19_01090	0.38	+1.7
1,127,109	-		MPMX19_01090	0.38	-0.3
1,127,109	-		MPMX19_01090	0.38	-1.3
1,127,109	-		MPMX19_01090	0.38	-0.4
1,127,109	-		MPMX19_01090	0.38	-1.2
1,127,109	-		MPMX19_01090	0.38	-0.3
1,127,109	-		MPMX19_01090	0.38	-0.1
1,127,109	-		MPMX19_01090	0.38	+0.3
1,127,109	-		MPMX19_01090	0.38	+0.9
1,127,296	+		MPMX19_01090	0.61	+0.2
1,127,297	-		MPMX19_01090	0.62	+0.5
1,127,621	+				-0.8
1,127,621	+				-0.6
1,127,621	+				+0.4
1,127,621	+				-0.1
1,127,621	+				-0.4
1,127,621	+				+0.8
1,127,621	+				-0.9
1,127,621	+				-0.4
1,127,621	+				-1.8
1,127,621	+				-1.8
1,127,622	-				-1.3
1,127,622	-				-0.3
1,127,622	-				+0.6
1,127,622	-				-0.6
1,127,622	-				+1.5
1,127,622	-				-0.0
1,127,622	-				-0.3
1,127,622	-				-0.5
1,127,622	-				+1.4
1,127,622	-				-1.4
1,127,624	+				+0.3
1,127,624	+				-0.1
1,127,624	+				-1.0
1,127,624	+				+0.4
1,127,624	+				+1.7
1,127,624	+				-0.8
1,127,625	-				-0.3
1,127,625	-				-0.1
1,127,625	-				-1.0
1,127,625	-				+0.0
1,127,625	-				-1.3
1,127,625	-				+0.4
1,127,625	-				-0.1
1,127,625	-				-0.3
1,127,625	-				-0.3
1,127,625	-				-1.2
1,127,656	+				-1.3
1,127,656	+				-0.2
1,127,656	+				-0.6
1,127,656	+				-1.9
1,127,656	+				+0.1
1,127,656	+				+1.7
1,127,656	+				+0.1
1,127,656	+				-1.3
1,127,656	+				-1.3
1,127,656	+				-1.1
1,127,656	+				+0.9
1,127,657	-				-1.6
1,127,657	-				+0.2
1,127,657	-				-0.2
1,127,657	-				-2.7
1,127,657	-				-0.5
1,127,703	+				-0.0
1,127,703	+				+0.1
1,127,703	+				-1.0
1,127,703	+				+0.3
1,127,703	+				-2.1
1,127,703	+				-0.1
1,127,703	+				+0.4
1,127,703	+				-1.2
1,127,703	+				-1.5
1,127,703	+				-0.1
1,127,703	+				-0.9
1,127,704	-				-1.8
1,127,704	-				-0.9
1,127,704	-				-0.2
1,127,704	-				-0.1
1,127,704	-				+0.9
1,127,704	-				-1.8
1,127,704	-				+0.5
1,127,704	-				-1.3
1,127,704	-				-1.2
1,127,704	-				+0.9
1,127,704	-				-0.1
1,127,704	-				+0.5
1,127,704	-				+0.5
1,127,704	-				-1.1
1,127,704	-				-1.2
1,127,704	-				-0.1
1,127,704	-				-0.2
1,127,736	+		MPMX19_01091	0.13	-0.2
1,127,736	+		MPMX19_01091	0.13	-0.1
1,127,736	+		MPMX19_01091	0.13	-1.6
1,127,736	+		MPMX19_01091	0.13	+0.1
1,127,736	+		MPMX19_01091	0.13	+1.9
1,127,736	+		MPMX19_01091	0.13	-0.0
1,127,736	+		MPMX19_01091	0.13	+0.7
1,127,736	+		MPMX19_01091	0.13	-0.9
1,127,736	+		MPMX19_01091	0.13	-1.0
1,127,736	+		MPMX19_01091	0.13	-1.5
1,127,736	+		MPMX19_01091	0.13	+0.4
1,127,736	+		MPMX19_01091	0.13	-0.3
1,127,736	+		MPMX19_01091	0.13	+0.5
1,127,737	-		MPMX19_01091	0.14	-0.6
1,127,737	-		MPMX19_01091	0.14	-0.5
1,127,737	-		MPMX19_01091	0.14	-1.4
1,127,737	-		MPMX19_01091	0.14	-1.8
1,127,737	-		MPMX19_01091	0.14	-0.5
1,127,737	-		MPMX19_01091	0.14	-0.4
1,127,737	-		MPMX19_01091	0.14	+0.3
1,127,737	-		MPMX19_01091	0.14	+0.2
1,127,737	-		MPMX19_01091	0.14	-0.3
1,127,803	-		MPMX19_01091	0.39	-1.2
1,127,826	+		MPMX19_01091	0.48	-0.9
1,127,826	+		MPMX19_01091	0.48	+0.5
1,127,826	+		MPMX19_01091	0.48	+0.4
1,127,826	+		MPMX19_01091	0.48	-1.6
1,127,826	+		MPMX19_01091	0.48	-0.3
1,127,826	+		MPMX19_01091	0.48	-0.2
1,127,826	+		MPMX19_01091	0.48	-1.1
1,127,826	+		MPMX19_01091	0.48	-1.3
1,127,826	+		MPMX19_01091	0.48	-1.1
1,127,826	+		MPMX19_01091	0.48	-2.4
1,127,826	+		MPMX19_01091	0.48	-0.9
1,127,826	+		MPMX19_01091	0.48	+0.4
1,127,826	+		MPMX19_01091	0.48	+0.2
1,127,826	+		MPMX19_01091	0.48	-1.8
1,127,826	+		MPMX19_01091	0.48	-0.1
1,127,826	+		MPMX19_01091	0.48	-0.6
1,127,826	+		MPMX19_01091	0.48	-0.4
1,127,827	-		MPMX19_01091	0.48	-0.1
1,127,827	-		MPMX19_01091	0.48	-1.1
1,127,827	-		MPMX19_01091	0.48	+0.9
1,127,827	-		MPMX19_01091	0.48	-1.8
1,127,827	-		MPMX19_01091	0.48	-0.6
1,127,827	-		MPMX19_01091	0.48	-0.4
1,127,827	-		MPMX19_01091	0.48	+0.8
1,127,827	-		MPMX19_01091	0.48	-0.5
1,127,827	-		MPMX19_01091	0.48	+0.1
1,127,827	-		MPMX19_01091	0.48	-0.6
1,127,827	-		MPMX19_01091	0.48	+0.9
1,127,827	-		MPMX19_01091	0.48	-0.8
1,127,827	-		MPMX19_01091	0.48	+0.7
1,127,827	-		MPMX19_01091	0.48	+0.2
1,127,827	-		MPMX19_01091	0.48	-0.6
1,127,827	-		MPMX19_01091	0.48	+0.1
1,127,827	-		MPMX19_01091	0.48	-0.6
1,127,827	-		MPMX19_01091	0.48	-0.1
1,127,827	-		MPMX19_01091	0.48	+0.3
1,127,827	-		MPMX19_01091	0.48	-0.3
1,128,054	+				+0.3
1,128,054	+				+0.0
1,128,054	+				-1.5
1,128,054	+				-1.9
1,128,054	+				+1.2
1,128,054	+				-1.8
1,128,054	+				-1.5
1,128,055	-				+0.1
1,128,086	+				-0.5
1,128,086	+				+0.0
1,128,087	-				-1.1
1,128,087	-				-1.0
1,128,087	-				+0.1
1,128,177	+				-0.4
1,128,177	+				-1.0
1,128,177	+				+0.1
1,128,177	+				+0.3
1,128,177	+				-0.9
1,128,177	+				-2.8
1,128,177	+				-2.3
1,128,178	-				+0.5
1,128,178	-				+0.8
1,128,178	-				-1.3
1,128,178	-				-1.4
1,128,178	-				+0.9