Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01088

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,124,300	+		MPMX19_01087	0.66	+1.7
1,124,300	+		MPMX19_01087	0.66	-1.5
1,124,300	+		MPMX19_01087	0.66	+0.0
1,124,301	-		MPMX19_01087	0.66	+0.4
1,124,301	-		MPMX19_01087	0.66	-0.5
1,124,301	-		MPMX19_01087	0.66	-0.3
1,124,426	+		MPMX19_01087	0.72	+0.2
1,124,426	+		MPMX19_01087	0.72	+1.3
1,124,426	+		MPMX19_01087	0.72	-1.0
1,124,426	+		MPMX19_01087	0.72	-0.5
1,124,426	+		MPMX19_01087	0.72	-0.5
1,124,426	+		MPMX19_01087	0.72	+0.9
1,124,426	+		MPMX19_01087	0.72	+1.5
1,124,426	+		MPMX19_01087	0.72	+1.0
1,124,426	+		MPMX19_01087	0.72	+0.5
1,124,426	+		MPMX19_01087	0.72	+0.0
1,124,426	+		MPMX19_01087	0.72	+0.9
1,124,426	+		MPMX19_01087	0.72	-0.4
1,124,426	+		MPMX19_01087	0.72	-1.1
1,124,426	+		MPMX19_01087	0.72	+0.7
1,124,426	+		MPMX19_01087	0.72	-1.1
1,124,426	+		MPMX19_01087	0.72	-1.6
1,124,426	+		MPMX19_01087	0.72	+0.4
1,124,426	+		MPMX19_01087	0.72	-0.5
1,124,426	+		MPMX19_01087	0.72	+0.2
1,124,426	+		MPMX19_01087	0.72	-0.2
1,124,426	+		MPMX19_01087	0.72	-1.3
1,124,426	+		MPMX19_01087	0.72	-0.9
1,124,426	+		MPMX19_01087	0.72	-0.2
1,124,426	+		MPMX19_01087	0.72	+0.4
1,124,426	+		MPMX19_01087	0.72	-0.6
1,124,426	+		MPMX19_01087	0.72	-0.6
1,124,426	+		MPMX19_01087	0.72	-1.6
1,124,426	+		MPMX19_01087	0.72	+1.4
1,124,426	+		MPMX19_01087	0.72	-1.1
1,124,426	+		MPMX19_01087	0.72	-1.1
1,124,426	+		MPMX19_01087	0.72	-1.3
1,124,426	+		MPMX19_01087	0.72	-0.2
1,124,426	+		MPMX19_01087	0.72	+0.5
1,124,427	-		MPMX19_01087	0.72	+0.2
1,124,427	-		MPMX19_01087	0.72	-0.8
1,124,427	-		MPMX19_01087	0.72	+0.7
1,124,427	-		MPMX19_01087	0.72	-0.9
1,124,427	-		MPMX19_01087	0.72	-0.2
1,124,427	-		MPMX19_01087	0.72	+0.7
1,124,427	-		MPMX19_01087	0.72	+0.5
1,124,427	-		MPMX19_01087	0.72	-1.6
1,124,427	-		MPMX19_01087	0.72	+0.1
1,124,427	-		MPMX19_01087	0.72	-0.6
1,124,427	-		MPMX19_01087	0.72	-1.5
1,124,427	-		MPMX19_01087	0.72	-1.0
1,124,427	-		MPMX19_01087	0.72	-1.5
1,124,427	-		MPMX19_01087	0.72	+0.1
1,124,427	-		MPMX19_01087	0.72	-0.6
1,124,427	-		MPMX19_01087	0.72	-0.6
1,124,427	-		MPMX19_01087	0.72	-0.7
1,124,427	-		MPMX19_01087	0.72	+0.5
1,124,427	-		MPMX19_01087	0.72	+0.7
1,124,427	-		MPMX19_01087	0.72	+1.4
1,124,427	-		MPMX19_01087	0.72	-1.1
1,124,427	-		MPMX19_01087	0.72	+0.8
1,124,427	-		MPMX19_01087	0.72	+0.2
1,124,427	-		MPMX19_01087	0.72	-0.6
1,124,427	-		MPMX19_01087	0.72	+1.3
1,124,427	-		MPMX19_01087	0.72	+0.1
1,124,427	-		MPMX19_01087	0.72	-1.0
1,124,427	-		MPMX19_01087	0.72	-0.1
1,124,427	-		MPMX19_01087	0.72	-0.4
1,124,427	-		MPMX19_01087	0.72	-0.9
1,124,427	-		MPMX19_01087	0.72	+0.7
1,124,427	-		MPMX19_01087	0.72	-0.5
1,124,427	-		MPMX19_01087	0.72	-1.6
1,124,427	-		MPMX19_01087	0.72	-1.0
1,124,427	-		MPMX19_01087	0.72	+0.2
1,124,427	-		MPMX19_01087	0.72	+0.2
1,124,427	-		MPMX19_01087	0.72	+0.1
1,124,427	-		MPMX19_01087	0.72	+0.6
1,124,690	+		MPMX19_01087	0.83	-0.8
1,124,690	+		MPMX19_01087	0.83	-0.5
1,124,690	+		MPMX19_01087	0.83	+0.0
1,124,690	+		MPMX19_01087	0.83	-0.6
1,124,691	-		MPMX19_01087	0.83	-0.2
1,124,691	-		MPMX19_01087	0.83	-1.7
1,124,691	-		MPMX19_01087	0.83	+0.2
1,124,691	-		MPMX19_01087	0.83	+0.2
1,124,816	+		MPMX19_01087	0.88	-0.2
1,124,816	+		MPMX19_01087	0.88	+0.2
1,124,816	+		MPMX19_01087	0.88	-0.9
1,124,816	+		MPMX19_01087	0.88	+0.1
1,124,816	+		MPMX19_01087	0.88	-2.6
1,124,816	+		MPMX19_01087	0.88	-1.3
1,124,816	+		MPMX19_01087	0.88	+0.1
1,124,816	+		MPMX19_01087	0.88	-0.2
1,124,816	+		MPMX19_01087	0.88	-0.9
1,124,816	+		MPMX19_01087	0.88	-0.5
1,124,816	+		MPMX19_01087	0.88	-0.9
1,124,816	+		MPMX19_01087	0.88	+0.9
1,124,816	+		MPMX19_01087	0.88	-1.5
1,124,816	+		MPMX19_01087	0.88	-2.1
1,124,816	+		MPMX19_01087	0.88	+0.9
1,124,816	+		MPMX19_01087	0.88	+0.2
1,124,816	+		MPMX19_01087	0.88	-1.2
1,124,816	+		MPMX19_01087	0.88	+0.0
1,124,816	+		MPMX19_01087	0.88	-0.3
1,124,816	+		MPMX19_01087	0.88	-0.9
1,124,816	+		MPMX19_01087	0.88	-1.2
1,124,816	+		MPMX19_01087	0.88	+0.1
1,124,816	+		MPMX19_01087	0.88	+1.7
1,124,816	+		MPMX19_01087	0.88	+0.5
1,124,816	+		MPMX19_01087	0.88	-0.6
1,124,817	-		MPMX19_01087	0.88	+0.9
1,124,817	-		MPMX19_01087	0.88	-2.0
1,124,817	-		MPMX19_01087	0.88	-2.0
1,124,817	-		MPMX19_01087	0.88	+0.1
1,124,817	-		MPMX19_01087	0.88	+0.7
1,124,817	-		MPMX19_01087	0.88	-1.5
1,124,817	-		MPMX19_01087	0.88	+2.9
1,124,817	-		MPMX19_01087	0.88	+1.7
1,124,817	-		MPMX19_01087	0.88	-1.0
1,124,817	-		MPMX19_01087	0.88	-0.7
1,124,817	-		MPMX19_01087	0.88	-1.0
1,124,817	-		MPMX19_01087	0.88	+0.6
1,124,817	-		MPMX19_01087	0.88	-0.6
1,124,817	-		MPMX19_01087	0.88	+0.9
1,124,817	-		MPMX19_01087	0.88	-2.9
1,124,817	-		MPMX19_01087	0.88	-0.2
1,124,817	-		MPMX19_01087	0.88	+1.4
1,124,817	-		MPMX19_01087	0.88	+0.3
1,124,817	-		MPMX19_01087	0.88	-1.6
1,124,817	-		MPMX19_01087	0.88	+1.3
1,124,817	-		MPMX19_01087	0.88	+0.1
1,124,817	-		MPMX19_01087	0.88	-0.2
1,124,817	-		MPMX19_01087	0.88	+0.7
1,124,817	-		MPMX19_01087	0.88	-1.1
1,124,817	-		MPMX19_01087	0.88	-1.5
1,124,817	-		MPMX19_01087	0.88	-1.8
1,124,817	-		MPMX19_01087	0.88	-0.7
1,124,817	-		MPMX19_01087	0.88	-0.6
1,124,817	-		MPMX19_01087	0.88	-1.6
1,124,817	-		MPMX19_01087	0.88	+0.4
1,124,817	-		MPMX19_01087	0.88	+0.9
1,124,817	-		MPMX19_01087	0.88	-1.3
1,124,817	-		MPMX19_01087	0.88	+0.5
1,124,817	-		MPMX19_01087	0.88	-0.6
1,124,817	-		MPMX19_01087	0.88	-0.1
1,124,897	+				+0.8
1,124,897	+				+0.8
1,124,897	+				-0.9
1,124,897	+				-0.9
1,124,897	+				-0.1
1,124,897	+				-0.6
1,124,897	+				-1.2
1,124,897	+				+0.1
1,124,898	-				-1.1
1,124,898	-				-0.5
1,124,898	-				-0.3
1,124,898	-				-0.4
1,124,990	+				-1.7
1,124,990	+				+0.1
1,124,990	+				+0.4
1,124,990	+				-1.1
1,124,990	+				-1.4
1,124,990	+				-0.2
1,124,990	+				+0.1
1,124,990	+				-0.2
1,124,990	+				+0.9
1,124,990	+				+0.1
1,124,991	-				-0.9
1,124,991	-				-0.6
1,124,991	-				-0.6
1,124,991	-				+0.3
1,124,991	-				-0.3
1,124,991	-				-1.6
1,124,991	-				+0.3
1,124,991	-				-0.3
1,124,991	-				-0.5
1,125,021	+				-1.1
1,125,021	+				+0.5
1,125,021	+				+1.7
1,125,021	+				-1.8
1,125,021	+				+1.2
1,125,021	+				-1.9
1,125,021	+				-0.2
1,125,021	+				+0.4
1,125,021	+				-0.3
1,125,021	+				+1.2
1,125,021	+				+0.7
1,125,022	-				-1.1
1,125,022	-				-0.1
1,125,022	-				-0.9
1,125,022	-				+0.3
1,125,022	-				-0.2
1,125,022	-				-1.9
1,125,023	+				+0.3
1,125,023	+				-2.9
1,125,023	+				-0.4
1,125,023	+				-2.2
1,125,023	+				-0.0
1,125,023	+				+0.1
1,125,024	-				+1.7
1,125,024	-				+0.5
1,125,024	-				-0.9
1,125,024	-				+1.7
1,125,024	-				+1.9
1,125,144	+				+0.1
1,125,144	+				+0.4
1,125,144	+				-1.5
1,125,144	+				-0.8
1,125,144	+				-1.3
1,125,144	+				-0.8
1,125,144	+				+0.2
1,125,144	+				-0.6
1,125,144	+				-0.4
1,125,145	-				-0.5
1,125,145	-				+0.3
1,125,145	-				+1.0
1,125,145	-				-0.8
1,125,145	-				-1.7
1,125,145	-				-0.9
1,125,272	+				-0.5
1,125,272	+				+1.3
1,125,272	+				-0.3
1,125,272	+				+0.4
1,125,272	+				+0.1
1,125,272	+				-0.1
1,125,272	+				-0.6
1,125,273	-				-0.3
1,125,273	-				-0.9
1,125,375	+		MPMX19_01088	0.11	+0.8
1,125,375	+		MPMX19_01088	0.11	-0.8
1,125,375	+		MPMX19_01088	0.11	-0.3
1,125,376	-		MPMX19_01088	0.11	+0.7
1,125,586	+		MPMX19_01088	0.40	-1.3
1,125,586	+		MPMX19_01088	0.40	-1.8
1,125,586	+		MPMX19_01088	0.40	-1.3
1,125,586	+		MPMX19_01088	0.40	-0.5
1,125,586	+		MPMX19_01088	0.40	-1.3
1,125,586	+		MPMX19_01088	0.40	-0.8
1,125,586	+		MPMX19_01088	0.40	+0.7
1,125,586	+		MPMX19_01088	0.40	-0.9
1,125,586	+		MPMX19_01088	0.40	-0.7
1,125,587	-		MPMX19_01088	0.40	-0.8
1,125,587	-		MPMX19_01088	0.40	-0.9
1,125,587	-		MPMX19_01088	0.40	+0.2
1,125,587	-		MPMX19_01088	0.40	+0.3
1,125,587	-		MPMX19_01088	0.40	+0.4
1,126,274	+		MPMX19_01089	0.42	-0.5
1,126,275	-		MPMX19_01089	0.42	-0.6
1,126,454	+		MPMX19_01089	0.75	-1.3
1,126,454	+		MPMX19_01089	0.75	-0.8
1,126,454	+		MPMX19_01089	0.75	+0.4
1,126,455	-		MPMX19_01089	0.75	-1.1
1,126,455	-		MPMX19_01089	0.75	+1.0
1,126,455	-		MPMX19_01089	0.75	-0.8
1,126,455	-		MPMX19_01089	0.75	-1.3
1,126,493	+		MPMX19_01089	0.83	-0.6
1,126,493	+		MPMX19_01089	0.83	-0.5
1,126,493	+		MPMX19_01089	0.83	+0.5
1,126,493	+		MPMX19_01089	0.83	-0.1
1,126,493	+		MPMX19_01089	0.83	-0.3
1,126,493	+		MPMX19_01089	0.83	+0.3
1,126,493	+		MPMX19_01089	0.83	-0.9
1,126,493	+		MPMX19_01089	0.83	+0.4
1,126,493	+		MPMX19_01089	0.83	+1.0
1,126,493	+		MPMX19_01089	0.83	-0.8
1,126,493	+		MPMX19_01089	0.83	+0.7
1,126,494	-		MPMX19_01089	0.83	-0.5
1,126,494	-		MPMX19_01089	0.83	-1.2
1,126,494	-		MPMX19_01089	0.83	-1.2
1,126,494	-		MPMX19_01089	0.83	-1.0
1,126,494	-		MPMX19_01089	0.83	+0.8
1,126,494	-		MPMX19_01089	0.83	-2.2
1,126,583	+				-1.0
1,126,583	+				-0.2
1,126,583	+				-0.7
1,126,583	+				-0.9
1,126,583	+				-1.5
1,126,583	+				-0.4
1,126,583	+				-0.6
1,126,583	+				-1.3
1,126,583	+				-1.6
1,126,583	+				-0.2
1,126,583	+				+0.9
1,126,583	+				-0.1
1,126,583	+				-0.5
1,126,583	+				+0.2
1,126,583	+				-0.1
1,126,583	+				-1.3
1,126,583	+				+0.1
1,126,583	+				-0.3
1,126,583	+				+0.4
1,126,583	+				-0.5
1,126,583	+				+0.5
1,126,584	-				+0.0
1,126,584	-				+0.1
1,126,584	-				-1.1
1,126,584	-				-0.5
1,126,584	-				-2.0
1,126,584	-				+0.2
1,126,584	-				+0.5
1,126,584	-				+0.0
1,126,584	-				+1.3
1,126,584	-				+0.2
1,126,584	-				+0.7
1,126,584	-				+0.1
1,126,584	-				-0.4
1,126,584	-				-0.3
1,126,624	+				-0.1
1,126,624	+				-1.5
1,126,624	+				+1.3
1,126,624	+				-0.3
1,126,624	+				+0.5
1,126,624	+				-1.0
1,126,624	+				+0.9
1,126,624	+				-0.0
1,126,624	+				-1.1
1,126,624	+				+0.7
1,126,625	-				-1.3
1,126,625	-				-0.0
1,126,625	-				+1.3
1,126,625	-				-2.2
1,126,625	-				-0.5
1,126,625	-				+0.8
1,126,625	-				+0.7
1,126,625	-				+0.1
1,126,625	-				-0.1
1,126,691	+				-1.3
1,126,691	+				-1.7
1,126,692	-				+0.2
1,126,801	+				-0.8
1,126,802	-				+0.1
1,126,802	-				+1.5
1,126,802	-				-0.9
1,126,811	+				-0.3
1,126,811	+				-0.6
1,126,812	-				-0.4
1,126,812	-				-0.6
1,126,853	+				-1.5
1,126,854	-				+0.7
1,126,899	+		MPMX19_01090	0.12	-1.1
1,126,982	+		MPMX19_01090	0.22	-1.1
1,126,982	+		MPMX19_01090	0.22	+0.1
1,126,982	+		MPMX19_01090	0.22	-0.6
1,126,982	+		MPMX19_01090	0.22	-0.4
1,126,982	+		MPMX19_01090	0.22	-0.1
1,126,982	+		MPMX19_01090	0.22	-0.5
1,126,982	+		MPMX19_01090	0.22	-2.8
1,126,982	+		MPMX19_01090	0.22	-1.6
1,126,982	+		MPMX19_01090	0.22	-0.5
1,126,982	+		MPMX19_01090	0.22	-0.6
1,126,982	+		MPMX19_01090	0.22	-0.5
1,126,982	+		MPMX19_01090	0.22	-0.1
1,126,982	+		MPMX19_01090	0.22	-0.6
1,126,982	+		MPMX19_01090	0.22	+0.7
1,126,982	+		MPMX19_01090	0.22	-2.0
1,126,982	+		MPMX19_01090	0.22	-0.8
1,126,982	+		MPMX19_01090	0.22	-0.4
1,126,982	+		MPMX19_01090	0.22	+0.9
1,126,982	+		MPMX19_01090	0.22	-0.3
1,126,982	+		MPMX19_01090	0.22	+0.2
1,126,982	+		MPMX19_01090	0.22	-1.7
1,126,983	-		MPMX19_01090	0.23	-0.4
1,126,983	-		MPMX19_01090	0.23	-1.3
1,126,983	-		MPMX19_01090	0.23	+1.3
1,126,983	-		MPMX19_01090	0.23	-1.1
1,126,983	-		MPMX19_01090	0.23	+0.4
1,126,983	-		MPMX19_01090	0.23	+0.3
1,126,983	-		MPMX19_01090	0.23	-0.4
1,126,983	-		MPMX19_01090	0.23	+0.6
1,126,983	-		MPMX19_01090	0.23	-0.2
1,126,983	-		MPMX19_01090	0.23	+2.3
1,126,983	-		MPMX19_01090	0.23	-0.9
1,126,983	-		MPMX19_01090	0.23	-0.5