Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01074

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,111,142	+				+0.5
1,111,142	+				-0.3
1,111,142	+				+0.6
1,111,143	-				+0.8
1,111,143	-				+1.2
1,111,143	-				-0.4
1,111,143	-				+0.2
1,111,143	-				-0.3
1,111,143	-				+0.6
1,111,145	+				+0.5
1,111,145	+				-1.8
1,111,145	+				-0.6
1,111,145	+				-1.3
1,111,145	+				+0.4
1,111,145	+				-0.5
1,111,145	+				-0.6
1,111,145	+				-1.3
1,111,145	+				-0.5
1,111,145	+				-1.1
1,111,145	+				-0.2
1,111,145	+				+0.1
1,111,146	-				-1.5
1,111,146	-				+0.1
1,111,146	-				-0.6
1,111,146	-				-0.3
1,111,146	-				+0.2
1,111,146	-				-0.0
1,111,146	-				+1.5
1,111,146	-				-1.7
1,111,146	-				-1.7
1,111,146	-				-1.5
1,111,146	-				+0.1
1,111,281	+		MPMX19_01073	0.20	+0.7
1,111,281	+		MPMX19_01073	0.20	-1.6
1,111,281	+		MPMX19_01073	0.20	-0.6
1,111,282	-		MPMX19_01073	0.20	+0.7
1,111,282	-		MPMX19_01073	0.20	-1.5
1,111,329	+		MPMX19_01073	0.27	+0.6
1,111,330	-		MPMX19_01073	0.27	-1.0
1,111,569	+		MPMX19_01073	0.63	+0.6
1,111,569	+		MPMX19_01073	0.63	+0.8
1,111,569	+		MPMX19_01073	0.63	+0.3
1,111,570	-		MPMX19_01073	0.63	-1.0
1,111,731	+		MPMX19_01073	0.87	-0.3
1,111,732	-		MPMX19_01073	0.87	+0.8
1,111,875	+				-0.5
1,111,875	+				+0.4
1,111,875	+				+0.7
1,111,875	+				-0.3
1,111,875	+				+0.0
1,111,875	+				-2.6
1,111,875	+				+0.5
1,111,876	-				+0.8
1,111,876	-				+0.6
1,111,876	-				-0.8
1,111,876	-				-1.8
1,111,876	-				+0.7
1,111,876	-				+0.4
1,111,876	-				+0.5
1,111,876	-				-2.3
1,111,876	-				-0.9
1,112,092	+		MPMX19_01074	0.16	-0.8
1,112,092	+		MPMX19_01074	0.16	-0.3
1,112,092	+		MPMX19_01074	0.16	-1.9
1,112,093	-		MPMX19_01074	0.16	-1.3
1,112,093	-		MPMX19_01074	0.16	-1.5
1,112,093	-		MPMX19_01074	0.16	-0.4
1,112,533	+		MPMX19_01074	0.51	-0.7
1,112,533	+		MPMX19_01074	0.51	-0.5
1,112,533	+		MPMX19_01074	0.51	-1.8
1,112,533	+		MPMX19_01074	0.51	-1.8
1,112,533	+		MPMX19_01074	0.51	+1.3
1,112,533	+		MPMX19_01074	0.51	-1.0
1,112,533	+		MPMX19_01074	0.51	-0.0
1,112,534	-		MPMX19_01074	0.51	-0.7
1,112,534	-		MPMX19_01074	0.51	+0.6
1,112,534	-		MPMX19_01074	0.51	-0.3
1,112,534	-		MPMX19_01074	0.51	-0.3
1,112,534	-		MPMX19_01074	0.51	+1.3
1,112,564	+		MPMX19_01074	0.53	-0.9
1,112,564	+		MPMX19_01074	0.53	+0.4
1,112,565	-		MPMX19_01074	0.53	+0.4
1,112,565	-		MPMX19_01074	0.53	+0.2
1,113,022	+		MPMX19_01074	0.90	-2.3
1,113,022	+		MPMX19_01074	0.90	-1.2
1,113,023	-		MPMX19_01074	0.90	-1.6
1,113,023	-		MPMX19_01074	0.90	-1.5
1,113,023	-		MPMX19_01074	0.90	-0.5
1,113,023	-		MPMX19_01074	0.90	+0.2
1,113,151	+				+0.2
1,113,151	+				+0.7
1,113,151	+				+1.0
1,113,151	+				-0.2
1,113,151	+				+0.7
1,113,176	+				-1.7
1,113,176	+				-0.3
1,113,176	+				-0.9
1,113,177	-				-0.6
1,113,177	-				+0.5
1,113,327	+		MPMX19_01075	0.65	-1.9
1,113,353	+		MPMX19_01075	0.75	+0.4
1,113,354	-		MPMX19_01075	0.75	+0.3
1,113,354	-		MPMX19_01075	0.75	+0.3
1,113,465	+				-2.1
1,113,465	+				+0.3
1,113,465	+				-0.6
1,113,465	+				+0.4
1,113,466	-		MPMX19_01076	0.10	+1.1
1,113,576	+		MPMX19_01076	0.34	-0.1
1,113,577	-		MPMX19_01076	0.35	-1.2
1,113,577	-		MPMX19_01076	0.35	+0.7
1,113,577	-		MPMX19_01076	0.35	-1.1
1,113,577	-		MPMX19_01076	0.35	-0.6
1,113,577	-		MPMX19_01076	0.35	-1.6
1,113,577	-		MPMX19_01076	0.35	-0.1
1,113,870	+				+0.1
1,113,870	+				+0.4
1,113,870	+				-0.5
1,113,870	+				+0.7
1,113,870	+				+0.1
1,113,870	+				-0.3
1,113,871	-				+0.2
1,113,871	-				-0.0
1,113,923	+				+0.7
1,113,923	+				-1.7
1,113,924	-				+0.2
1,113,924	-				-0.8
1,113,924	-				-0.5
1,113,924	-				-0.4
1,113,924	-				-1.0
1,113,961	+				+0.7
1,113,961	+				-0.8
1,113,962	-				-0.1
1,114,013	+				+0.4
1,114,013	+				+1.2
1,114,022	+				+0.3
1,114,024	+				-0.2
1,114,025	-				-1.9
1,114,035	+				-0.9
1,114,059	+				-1.1
1,114,062	+				+0.5
1,114,062	+				-1.6
1,114,063	-				+1.4
1,114,077	+				-1.1
1,114,077	+				+1.2
1,114,078	-				-2.5
1,114,078	-				-0.9