Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01051

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,090,173	+		MPMX19_01049	0.73	+0.5
1,090,173	+		MPMX19_01049	0.73	-0.7
1,090,173	+		MPMX19_01049	0.73	-1.5
1,090,173	+		MPMX19_01049	0.73	+0.2
1,090,174	-		MPMX19_01049	0.73	+0.7
1,090,174	-		MPMX19_01049	0.73	-1.8
1,090,182	+		MPMX19_01049	0.74	-1.0
1,090,182	+		MPMX19_01049	0.74	-0.6
1,090,182	+		MPMX19_01049	0.74	-1.2
1,090,182	+		MPMX19_01049	0.74	+0.2
1,090,182	+		MPMX19_01049	0.74	-0.0
1,090,182	+		MPMX19_01049	0.74	+1.0
1,090,182	+		MPMX19_01049	0.74	-0.7
1,090,182	+		MPMX19_01049	0.74	-1.8
1,090,183	-		MPMX19_01049	0.74	-1.0
1,090,183	-		MPMX19_01049	0.74	-0.2
1,090,183	-		MPMX19_01049	0.74	-1.7
1,090,183	-		MPMX19_01049	0.74	+0.3
1,090,183	-		MPMX19_01049	0.74	-0.6
1,090,183	-		MPMX19_01049	0.74	-2.3
1,090,183	-		MPMX19_01049	0.74	+0.5
1,090,183	-		MPMX19_01049	0.74	+0.1
1,090,183	-		MPMX19_01049	0.74	+2.0
1,090,184	+		MPMX19_01049	0.74	-0.3
1,090,184	+		MPMX19_01049	0.74	-0.4
1,090,184	+		MPMX19_01049	0.74	+1.3
1,090,184	+		MPMX19_01049	0.74	+0.0
1,090,184	+		MPMX19_01049	0.74	-1.1
1,090,184	+		MPMX19_01049	0.74	-1.2
1,090,185	-		MPMX19_01049	0.74	+0.1
1,090,185	-		MPMX19_01049	0.74	+0.1
1,090,185	-		MPMX19_01049	0.74	-1.4
1,090,224	+		MPMX19_01049	0.78	-0.4
1,090,224	+		MPMX19_01049	0.78	+0.8
1,090,224	+		MPMX19_01049	0.78	+0.3
1,090,225	-		MPMX19_01049	0.78	-0.5
1,090,261	-		MPMX19_01049	0.82	+0.7
1,090,269	+		MPMX19_01049	0.82	+0.4
1,090,269	+		MPMX19_01049	0.82	-0.5
1,090,270	-		MPMX19_01049	0.83	+0.4
1,090,270	-		MPMX19_01049	0.83	+0.7
1,090,270	-		MPMX19_01049	0.83	-1.5
1,090,270	-		MPMX19_01049	0.83	+0.4
1,090,314	+		MPMX19_01049	0.87	-1.0
1,090,315	-		MPMX19_01049	0.87	+1.5
1,090,315	-		MPMX19_01049	0.87	-1.3
1,090,361	+				-2.1
1,090,361	+				-0.8
1,090,361	+				-2.0
1,090,361	+				-1.0
1,090,362	-				+0.3
1,090,362	-				-1.3
1,090,362	-				-1.8
1,090,362	-				-0.1
1,090,362	-				-0.6
1,090,362	-				-0.0
1,090,362	-				-0.3
1,090,362	-				-0.3
1,090,362	-				-0.0
1,090,441	-				-0.2
1,090,630	+		MPMX19_01050	0.29	-0.5
1,090,630	+		MPMX19_01050	0.29	+0.1
1,090,631	-		MPMX19_01050	0.29	+0.8
1,091,303	+		MPMX19_01051	0.18	+0.3
1,091,303	+		MPMX19_01051	0.18	-2.0
1,091,303	+		MPMX19_01051	0.18	+0.2
1,091,303	+		MPMX19_01051	0.18	-1.6
1,091,303	+		MPMX19_01051	0.18	-0.2
1,091,303	+		MPMX19_01051	0.18	+0.4
1,091,304	-		MPMX19_01051	0.18	+0.1
1,091,304	-		MPMX19_01051	0.18	-1.6
1,091,304	-		MPMX19_01051	0.18	-0.9
1,091,304	-		MPMX19_01051	0.18	-1.6
1,091,304	-		MPMX19_01051	0.18	-0.2
1,091,363	+		MPMX19_01051	0.21	+0.7
1,091,363	+		MPMX19_01051	0.21	-1.8
1,091,363	+		MPMX19_01051	0.21	-1.1
1,091,363	+		MPMX19_01051	0.21	+0.6
1,091,363	+		MPMX19_01051	0.21	-0.8
1,091,363	+		MPMX19_01051	0.21	-2.8
1,091,363	+		MPMX19_01051	0.21	-0.5
1,091,363	+		MPMX19_01051	0.21	-0.0
1,091,363	+		MPMX19_01051	0.21	-0.8
1,091,363	+		MPMX19_01051	0.21	-2.1
1,091,363	+		MPMX19_01051	0.21	-0.0
1,091,363	+		MPMX19_01051	0.21	-0.3
1,091,364	-		MPMX19_01051	0.21	+0.1
1,091,364	-		MPMX19_01051	0.21	-0.4
1,091,364	-		MPMX19_01051	0.21	-0.5
1,091,364	-		MPMX19_01051	0.21	-1.8
1,091,364	-		MPMX19_01051	0.21	-1.0
1,091,364	-		MPMX19_01051	0.21	+0.1
1,091,364	-		MPMX19_01051	0.21	-0.7
1,091,364	-		MPMX19_01051	0.21	-0.8
1,091,364	-		MPMX19_01051	0.21	-1.2
1,091,364	-		MPMX19_01051	0.21	-0.0
1,091,364	-		MPMX19_01051	0.21	-1.6
1,091,364	-		MPMX19_01051	0.21	+0.9
1,091,364	-		MPMX19_01051	0.21	-0.0
1,091,364	-		MPMX19_01051	0.21	+1.7
1,091,364	-		MPMX19_01051	0.21	-0.8
1,091,364	-		MPMX19_01051	0.21	-1.0
1,091,364	-		MPMX19_01051	0.21	-1.4
1,091,364	-		MPMX19_01051	0.21	-0.2
1,091,364	-		MPMX19_01051	0.21	+1.1
1,091,364	-		MPMX19_01051	0.21	+0.3
1,091,364	-		MPMX19_01051	0.21	-0.7
1,091,364	-		MPMX19_01051	0.21	+0.5
1,091,364	-		MPMX19_01051	0.21	-0.6
1,091,364	-		MPMX19_01051	0.21	+0.7
1,091,364	-		MPMX19_01051	0.21	+0.7
1,091,438	+		MPMX19_01051	0.25	-1.3
1,091,439	-		MPMX19_01051	0.25	+0.0
1,091,451	-		MPMX19_01051	0.25	-0.9
1,091,702	+		MPMX19_01051	0.38	+0.4
1,091,702	+		MPMX19_01051	0.38	-0.6
1,091,703	-		MPMX19_01051	0.38	+0.3
1,091,703	-		MPMX19_01051	0.38	-0.9
1,091,864	+		MPMX19_01051	0.46	+0.1
1,091,864	+		MPMX19_01051	0.46	-2.0
1,091,864	+		MPMX19_01051	0.46	-0.8
1,091,865	-		MPMX19_01051	0.46	+0.4
1,091,865	-		MPMX19_01051	0.46	-1.0
1,091,865	-		MPMX19_01051	0.46	-2.8
1,091,865	-		MPMX19_01051	0.46	-0.6
1,091,865	-		MPMX19_01051	0.46	+1.0
1,091,865	-		MPMX19_01051	0.46	-1.8
1,091,865	-		MPMX19_01051	0.46	-0.7
1,091,865	-		MPMX19_01051	0.46	-0.1
1,091,865	-		MPMX19_01051	0.46	-2.0
1,091,909	+		MPMX19_01051	0.49	-0.4
1,091,909	+		MPMX19_01051	0.49	-0.0
1,091,909	+		MPMX19_01051	0.49	-0.9
1,091,909	+		MPMX19_01051	0.49	-0.5
1,091,909	+		MPMX19_01051	0.49	-0.5
1,091,909	+		MPMX19_01051	0.49	-1.4
1,091,909	+		MPMX19_01051	0.49	-0.0
1,091,909	+		MPMX19_01051	0.49	-0.9
1,091,909	+		MPMX19_01051	0.49	-0.3
1,091,909	+		MPMX19_01051	0.49	-0.2
1,091,910	-		MPMX19_01051	0.49	+2.1
1,091,910	-		MPMX19_01051	0.49	-0.9
1,091,910	-		MPMX19_01051	0.49	+0.3
1,091,910	-		MPMX19_01051	0.49	-1.5
1,091,910	-		MPMX19_01051	0.49	+0.5
1,091,910	-		MPMX19_01051	0.49	-0.2
1,091,910	-		MPMX19_01051	0.49	-1.8
1,091,984	+		MPMX19_01051	0.53	-1.6
1,091,984	+		MPMX19_01051	0.53	+0.6
1,091,984	+		MPMX19_01051	0.53	-1.6
1,091,984	+		MPMX19_01051	0.53	-0.8
1,091,984	+		MPMX19_01051	0.53	-0.6
1,091,984	+		MPMX19_01051	0.53	-0.8
1,091,984	+		MPMX19_01051	0.53	-0.5
1,091,984	+		MPMX19_01051	0.53	-0.9
1,091,985	-		MPMX19_01051	0.53	-1.1
1,091,985	-		MPMX19_01051	0.53	+0.1
1,091,985	-		MPMX19_01051	0.53	-0.6
1,091,985	-		MPMX19_01051	0.53	-0.4
1,091,985	-		MPMX19_01051	0.53	-0.2
1,091,985	-		MPMX19_01051	0.53	+0.1
1,091,985	-		MPMX19_01051	0.53	-3.5
1,091,985	-		MPMX19_01051	0.53	-0.6
1,091,985	-		MPMX19_01051	0.53	+0.2
1,091,985	-		MPMX19_01051	0.53	+0.6
1,091,985	-		MPMX19_01051	0.53	+0.4
1,091,985	-		MPMX19_01051	0.53	-1.1
1,091,985	-		MPMX19_01051	0.53	-1.8
1,091,985	-		MPMX19_01051	0.53	-0.6
1,092,104	+		MPMX19_01051	0.59	+0.3
1,092,104	+		MPMX19_01051	0.59	+0.3
1,092,104	+		MPMX19_01051	0.59	+0.4
1,092,104	+		MPMX19_01051	0.59	+0.1
1,092,104	+		MPMX19_01051	0.59	+0.2
1,092,104	+		MPMX19_01051	0.59	+0.1
1,092,104	+		MPMX19_01051	0.59	-1.0
1,092,164	+		MPMX19_01051	0.62	-1.3
1,092,233	+		MPMX19_01051	0.65	+0.8
1,092,233	+		MPMX19_01051	0.65	+0.5
1,092,233	+		MPMX19_01051	0.65	-1.2
1,092,233	+		MPMX19_01051	0.65	+0.1
1,092,233	+		MPMX19_01051	0.65	-1.5
1,092,233	+		MPMX19_01051	0.65	-0.4
1,092,233	+		MPMX19_01051	0.65	-0.2
1,092,233	+		MPMX19_01051	0.65	-0.5
1,092,233	+		MPMX19_01051	0.65	+0.1
1,092,233	+		MPMX19_01051	0.65	-0.5
1,092,234	-		MPMX19_01051	0.65	-0.6
1,092,234	-		MPMX19_01051	0.65	-1.5
1,092,234	-		MPMX19_01051	0.65	-1.5
1,092,234	-		MPMX19_01051	0.65	-1.8
1,092,234	-		MPMX19_01051	0.65	-0.3
1,092,234	-		MPMX19_01051	0.65	+0.9
1,092,234	-		MPMX19_01051	0.65	-0.5
1,092,234	-		MPMX19_01051	0.65	-1.5
1,092,234	-		MPMX19_01051	0.65	+0.2
1,092,234	-		MPMX19_01051	0.65	-2.2
1,092,320	+		MPMX19_01051	0.70	+0.0
1,092,320	+		MPMX19_01051	0.70	+0.2
1,092,320	+		MPMX19_01051	0.70	+0.5
1,092,320	+		MPMX19_01051	0.70	-0.6
1,092,320	+		MPMX19_01051	0.70	-0.2
1,092,320	+		MPMX19_01051	0.70	-1.6
1,092,320	+		MPMX19_01051	0.70	+1.2
1,092,320	+		MPMX19_01051	0.70	+0.1
1,092,320	+		MPMX19_01051	0.70	-0.5
1,092,320	+		MPMX19_01051	0.70	-1.0
1,092,320	+		MPMX19_01051	0.70	-0.5
1,092,320	+		MPMX19_01051	0.70	-1.3
1,092,320	+		MPMX19_01051	0.70	-0.5
1,092,320	+		MPMX19_01051	0.70	+0.0
1,092,320	+		MPMX19_01051	0.70	-0.4
1,092,320	+		MPMX19_01051	0.70	-1.3
1,092,320	+		MPMX19_01051	0.70	-1.8
1,092,320	+		MPMX19_01051	0.70	-2.0
1,092,320	+		MPMX19_01051	0.70	-0.9
1,092,320	+		MPMX19_01051	0.70	-0.3
1,092,320	+		MPMX19_01051	0.70	+0.5
1,092,320	+		MPMX19_01051	0.70	+0.3
1,092,321	-		MPMX19_01051	0.70	-0.8
1,092,321	-		MPMX19_01051	0.70	+0.2
1,092,321	-		MPMX19_01051	0.70	+0.3
1,092,321	-		MPMX19_01051	0.70	+1.0
1,092,321	-		MPMX19_01051	0.70	-0.3
1,092,321	-		MPMX19_01051	0.70	+0.1
1,092,321	-		MPMX19_01051	0.70	+2.4
1,092,321	-		MPMX19_01051	0.70	-2.2
1,092,321	-		MPMX19_01051	0.70	+0.3
1,092,321	-		MPMX19_01051	0.70	+0.9
1,092,321	-		MPMX19_01051	0.70	-2.7
1,092,321	-		MPMX19_01051	0.70	+1.0
1,092,321	-		MPMX19_01051	0.70	-0.3
1,092,326	+		MPMX19_01051	0.70	-0.1
1,092,326	+		MPMX19_01051	0.70	+0.8
1,092,326	+		MPMX19_01051	0.70	-0.1
1,092,326	+		MPMX19_01051	0.70	-0.5
1,092,326	+		MPMX19_01051	0.70	-0.3
1,092,327	-		MPMX19_01051	0.70	-0.5
1,092,327	-		MPMX19_01051	0.70	-0.3
1,092,327	-		MPMX19_01051	0.70	-0.6
1,092,327	-		MPMX19_01051	0.70	+0.7
1,092,327	-		MPMX19_01051	0.70	-1.1
1,092,575	+		MPMX19_01051	0.83	+0.8
1,092,575	+		MPMX19_01051	0.83	-0.0
1,092,575	+		MPMX19_01051	0.83	-0.1
1,092,575	+		MPMX19_01051	0.83	-0.6
1,092,575	+		MPMX19_01051	0.83	-0.5
1,092,575	+		MPMX19_01051	0.83	-1.5
1,092,575	+		MPMX19_01051	0.83	+0.6
1,092,575	+		MPMX19_01051	0.83	-1.4
1,092,575	+		MPMX19_01051	0.83	-0.4
1,092,575	+		MPMX19_01051	0.83	-1.1
1,092,575	+		MPMX19_01051	0.83	-2.0
1,092,575	+		MPMX19_01051	0.83	+0.1
1,092,575	+		MPMX19_01051	0.83	-0.6
1,092,576	-		MPMX19_01051	0.83	-0.3
1,092,576	-		MPMX19_01051	0.83	-0.8
1,092,576	-		MPMX19_01051	0.83	-0.2
1,092,576	-		MPMX19_01051	0.83	-0.3
1,092,576	-		MPMX19_01051	0.83	-1.0
1,092,576	-		MPMX19_01051	0.83	-1.1
1,092,576	-		MPMX19_01051	0.83	-0.8
1,092,576	-		MPMX19_01051	0.83	-1.1
1,092,647	+		MPMX19_01051	0.87	+0.9
1,092,647	+		MPMX19_01051	0.87	-1.1
1,092,647	+		MPMX19_01051	0.87	-1.6
1,092,647	+		MPMX19_01051	0.87	-0.7
1,092,647	+		MPMX19_01051	0.87	+0.2
1,092,647	+		MPMX19_01051	0.87	+1.9
1,092,647	+		MPMX19_01051	0.87	+0.6
1,092,647	+		MPMX19_01051	0.87	+1.1
1,092,647	+		MPMX19_01051	0.87	+1.1
1,092,647	+		MPMX19_01051	0.87	-0.5
1,092,648	-		MPMX19_01051	0.87	-1.3
1,092,648	-		MPMX19_01051	0.87	-1.3
1,092,648	-		MPMX19_01051	0.87	-0.3
1,092,648	-		MPMX19_01051	0.87	+1.0
1,092,648	-		MPMX19_01051	0.87	+0.1
1,092,648	-		MPMX19_01051	0.87	-0.3
1,092,791	+				-0.0
1,092,791	+				+0.9
1,092,791	+				-1.1
1,092,791	+				-0.4
1,092,791	+				+0.7
1,092,791	+				-1.1
1,092,791	+				-0.4
1,092,791	+				-0.2
1,092,791	+				-1.9
1,092,791	-				-1.4
1,092,792	-				+0.8
1,092,792	-				+1.1
1,092,792	-				+1.4
1,092,792	-				-1.1
1,092,792	-				+0.2
1,092,792	-				-1.2
1,092,792	-				+0.0
1,092,792	-				-1.2
1,092,792	-				-0.2
1,092,792	-				-0.1
1,092,792	-				-1.6
1,092,792	-				-1.5
1,092,803	+				+0.8
1,092,803	+				-1.6
1,092,803	+				-2.2
1,092,803	+				+0.8
1,092,803	+				-0.2
1,092,803	+				-0.3
1,092,803	+				-1.1
1,092,803	+				-0.6
1,092,804	-				-0.9
1,092,804	-				-1.3
1,092,804	-				+0.1
1,092,804	-				+0.8
1,093,002	+				-0.2
1,093,002	+				-1.3
1,093,002	+				-1.2
1,093,003	-				+0.1
1,093,003	-				+0.7
1,093,003	-				+0.1
1,093,003	-				-0.2
1,093,003	-				-2.0
1,093,137	+				+1.7
1,093,137	+				-0.0
1,093,137	+				-0.9
1,093,137	+				+0.4
1,093,137	+				-1.1
1,093,137	+				+1.0
1,093,138	-				+0.2
1,093,138	-				-1.3
1,093,138	-				-0.7
1,093,138	-				-1.8
1,093,138	-				-0.8