Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00842 and MPMX19_00843 are separated by 0 nucleotides MPMX19_00843 and MPMX19_00844 overlap by 8 nucleotides MPMX19_00844 and MPMX19_00845 are separated by 93 nucleotides MPMX19_00845 and MPMX19_00846 are separated by 510 nucleotides
MPMX19_00842: MPMX19_00842 - Signal peptidase I, at 874,001 to 874,768
_00842
MPMX19_00843: MPMX19_00843 - Ribonuclease 3, at 874,769 to 875,554
_00843
MPMX19_00844: MPMX19_00844 - GTPase Era, at 875,547 to 876,731
_00844
MPMX19_00845: MPMX19_00845 - hypothetical protein, at 876,825 to 877,130
_00845
MPMX19_00846: MPMX19_00846 - hypothetical protein, at 877,641 to 877,934
_00846
Position (kb)
875
876
877 Strain fitness (log2 ratio)
-2
-1
0
1 at 874.706 kb on + strand at 876.696 kb on + strand at 876.697 kb on - strand at 876.697 kb on - strand at 876.938 kb on + strand, within MPMX19_00845 at 876.939 kb on - strand, within MPMX19_00845 at 876.939 kb on - strand, within MPMX19_00845 at 877.203 kb on + strand at 877.204 kb on - strand at 877.204 kb on - strand at 877.204 kb on - strand at 877.204 kb on - strand at 877.306 kb on + strand at 877.306 kb on + strand at 877.306 kb on + strand at 877.307 kb on - strand at 877.307 kb on - strand at 877.440 kb on + strand at 877.440 kb on + strand at 877.440 kb on + strand at 877.441 kb on - strand at 877.441 kb on - strand at 877.527 kb on - strand at 877.527 kb on - strand at 877.566 kb on + strand at 877.566 kb on + strand at 877.567 kb on - strand at 877.567 kb on - strand at 877.567 kb on - strand at 877.576 kb on - strand at 877.599 kb on + strand at 877.600 kb on - strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.623 kb on - strand at 877.623 kb on - strand at 877.623 kb on - strand at 877.623 kb on - strand at 877.660 kb on + strand at 877.660 kb on + strand at 877.661 kb on - strand at 877.661 kb on - strand at 877.661 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 874,706 + +0.3 876,696 + -1.3 876,697 - -0.9 876,697 - +1.7 876,938 + MPMX19_00845 0.37 -0.4 876,939 - MPMX19_00845 0.37 -0.3 876,939 - MPMX19_00845 0.37 -1.1 877,203 + -1.2 877,204 - +0.5 877,204 - -0.8 877,204 - -0.1 877,204 - +0.3 877,306 + -0.1 877,306 + -2.3 877,306 + -0.6 877,307 - +1.1 877,307 - -1.0 877,440 + +0.4 877,440 + -0.3 877,440 + -0.6 877,441 - -0.8 877,441 - -1.1 877,527 - -0.8 877,527 - -1.6 877,566 + +0.6 877,566 + -0.9 877,567 - -0.9 877,567 - -1.3 877,567 - +0.1 877,576 - -0.3 877,599 + -0.3 877,600 - +0.1 877,622 + -1.7 877,622 + -1.8 877,622 + +0.4 877,622 + -0.5 877,622 + -0.4 877,622 + +1.2 877,622 + -1.3 877,623 - +0.6 877,623 - -0.3 877,623 - -0.2 877,623 - -0.1 877,660 + +0.1 877,660 + +0.4 877,661 - -0.7 877,661 - -0.6 877,661 - +0.4
Or see this region's nucleotide sequence