Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00838

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
869,004	+		MPMX19_00836	0.80	+1.5
869,167	+				-1.1
869,168	-				-0.8
869,209	+				-1.3
869,209	+				+1.0
869,210	-				-2.2
869,214	+				+0.1
869,214	+				+0.4
869,214	+				-0.2
869,215	-				-1.4
869,215	-				-0.7
869,215	-				-1.0
869,215	-				-0.2
869,215	-				-1.6
869,215	-				-1.6
869,215	-				-1.6
869,229	+				-1.9
869,229	+				+0.1
869,229	+				-0.9
869,229	+				-2.1
869,229	+				+0.7
869,229	+				+0.9
869,230	-				-0.2
869,230	-				-0.1
869,230	-				-0.2
869,230	-				-0.5
869,230	-				-0.3
869,230	-				+0.4
869,249	+				+1.3
869,249	+				+1.0
869,249	+				-0.2
869,250	-				-0.3
869,250	-				+0.6
869,250	-				-0.3
869,277	+				-0.6
869,358	+				-0.4
869,358	+				+0.7
869,358	+				-2.0
869,358	+				-1.7
869,365	+				-0.6
869,999	+				-2.0
870,026	+				-2.4
870,026	+				+0.0
870,026	+				-2.1
870,026	+				-0.6
870,026	+				+0.1
870,027	-				-0.9
870,119	+				-1.3
870,485	+		MPMX19_00838	0.23	-0.9
870,486	-		MPMX19_00838	0.23	-2.0
870,812	+		MPMX19_00838	0.38	+1.3
870,872	+		MPMX19_00838	0.41	-2.4
870,872	+		MPMX19_00838	0.41	-0.9
871,217	+		MPMX19_00838	0.57	-3.1
871,218	-		MPMX19_00838	0.57	-0.3
871,218	-		MPMX19_00838	0.57	-0.6
871,218	-		MPMX19_00838	0.57	-1.1
871,737	-		MPMX19_00838	0.81	+0.1
871,737	-		MPMX19_00838	0.81	-0.4
872,077	+				-1.1
872,077	+				-1.1
872,077	+				+0.3
872,190	+				-0.8
872,190	+				+0.8
872,190	+				-0.3
872,190	+				+0.8
872,190	+				-0.7
872,191	-				+0.4
872,191	-				+0.5
872,191	-				-1.7
872,191	-				-1.0
872,191	-				-0.6
872,191	-				+0.7
872,191	-				+0.5
872,191	-				-0.9
872,191	-				-2.4
872,231	-				-1.6
872,262	+				-0.3
872,262	+				-1.9
872,262	+				+0.7
872,262	+				+0.6
872,262	+				+0.1
872,262	+				-1.5
872,262	+				-0.7
872,262	+				-0.7
872,262	+				+0.4
872,262	+				+0.7
872,262	+				+0.6
872,262	+				-1.4
872,263	-				-0.1
872,263	-				-2.2
872,263	-				-0.9
872,263	-				-0.9
872,263	-				-0.6
872,263	-				-0.9
872,263	-				-0.1
872,263	-				-1.7
872,263	-				+0.0
872,263	-				+0.4
872,263	-				+1.7
872,263	-				-2.0
872,436	-		MPMX19_00839	0.39	-1.3
872,567	+		MPMX19_00839	0.88	-0.6
872,568	-		MPMX19_00839	0.88	+1.1
872,568	-		MPMX19_00839	0.88	-0.2
872,568	-		MPMX19_00839	0.88	-1.7
872,598	-				+0.1
872,598	-				+1.0
872,658	-				-1.1
872,658	-				+0.2
872,658	-				-0.3
872,720	+				-0.3
872,720	+				+1.0
872,720	+				+0.5
872,720	+				-0.1
872,720	+				+0.2
872,720	+				-1.1
872,720	+				-0.2
872,720	+				-0.6
872,720	+				-0.9
872,722	+				-0.1
872,722	+				-1.4
872,722	+				-0.2
872,722	+				-0.1
872,722	+				-1.0
872,722	+				-0.1
872,722	+				-2.1
872,722	+				+1.4
872,722	+				-1.9
872,722	+				-0.9
872,722	+				+0.3
872,722	+				-0.9
872,722	+				-0.0
872,722	+				-0.9
872,722	+				-1.7
872,722	+				+0.3
872,722	+				-1.1
872,722	+				-0.9
872,724	+				+0.1
872,724	+				-0.1
872,724	+				-0.1
872,724	+				+1.7
872,724	+				+0.1
872,724	+				+0.1
872,724	+				-0.3
872,724	+				-1.6
872,724	+				-0.1
872,724	+				-1.6
872,724	+				+0.1
872,724	+				-0.2
872,724	+				-1.3
872,724	+				+0.7
872,724	+				-2.0
872,724	+				+0.0
872,724	+				-2.6
873,118	+		MPMX19_00840	0.45	-1.2
873,118	+		MPMX19_00840	0.45	+0.3
873,118	+		MPMX19_00840	0.45	+1.0