Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00317 and MPMX19_00318 overlap by 4 nucleotides MPMX19_00318 and MPMX19_00319 are separated by 31 nucleotides MPMX19_00319 and MPMX19_00320 are separated by 146 nucleotides
MPMX19_00317: MPMX19_00317 - hypothetical protein, at 320,828 to 322,555
_00317
MPMX19_00318: MPMX19_00318 - hypothetical protein, at 322,552 to 323,880
_00318
MPMX19_00319: MPMX19_00319 - hypothetical protein, at 323,912 to 324,544
_00319
MPMX19_00320: MPMX19_00320 - hypothetical protein, at 324,691 to 325,335
_00320
Position (kb) 322
323
324 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 321.683 kb on + strand, within MPMX19_00317 at 321.683 kb on + strand, within MPMX19_00317 at 321.683 kb on + strand, within MPMX19_00317 at 321.683 kb on + strand, within MPMX19_00317 at 321.683 kb on + strand, within MPMX19_00317 at 321.684 kb on - strand, within MPMX19_00317 at 321.684 kb on - strand, within MPMX19_00317 at 321.684 kb on - strand, within MPMX19_00317 at 321.684 kb on - strand, within MPMX19_00317 at 321.684 kb on - strand, within MPMX19_00317 at 321.684 kb on - strand, within MPMX19_00317 at 321.684 kb on - strand, within MPMX19_00317 at 321.684 kb on - strand, within MPMX19_00317 at 321.798 kb on - strand, within MPMX19_00317 at 321.854 kb on + strand, within MPMX19_00317 at 321.855 kb on - strand, within MPMX19_00317 at 321.892 kb on + strand, within MPMX19_00317 at 321.893 kb on - strand, within MPMX19_00317 at 321.955 kb on + strand, within MPMX19_00317 at 321.955 kb on + strand, within MPMX19_00317 at 321.955 kb on + strand, within MPMX19_00317 at 321.955 kb on + strand, within MPMX19_00317 at 321.956 kb on - strand, within MPMX19_00317 at 321.956 kb on - strand, within MPMX19_00317 at 321.956 kb on - strand, within MPMX19_00317 at 321.984 kb on - strand, within MPMX19_00317 at 321.984 kb on - strand, within MPMX19_00317 at 321.984 kb on - strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.109 kb on + strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.110 kb on - strand, within MPMX19_00317 at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.448 kb on + strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.449 kb on - strand at 322.600 kb on + strand at 322.600 kb on + strand at 322.600 kb on + strand at 322.601 kb on - strand at 322.601 kb on - strand at 322.601 kb on - strand at 322.601 kb on - strand at 322.601 kb on - strand at 322.690 kb on + strand, within MPMX19_00318 at 322.690 kb on + strand, within MPMX19_00318 at 322.690 kb on + strand, within MPMX19_00318 at 322.690 kb on + strand, within MPMX19_00318 at 322.690 kb on + strand, within MPMX19_00318 at 322.690 kb on + strand, within MPMX19_00318 at 322.690 kb on + strand, within MPMX19_00318 at 322.690 kb on + strand, within MPMX19_00318 at 322.690 kb on + strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 322.691 kb on - strand, within MPMX19_00318 at 323.070 kb on + strand, within MPMX19_00318 at 323.071 kb on - strand, within MPMX19_00318 at 323.071 kb on - strand, within MPMX19_00318 at 323.793 kb on + strand at 323.793 kb on + strand at 323.793 kb on + strand at 323.793 kb on + strand at 323.793 kb on + strand at 323.793 kb on + strand at 323.793 kb on + strand at 323.793 kb on + strand at 323.793 kb on + strand at 323.793 kb on + strand at 323.793 kb on + strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.794 kb on - strand at 323.816 kb on - strand at 323.816 kb on - strand at 323.912 kb on - strand at 324.194 kb on + strand, within MPMX19_00319 at 324.485 kb on + strand at 324.485 kb on + strand at 324.485 kb on + strand at 324.485 kb on + strand at 324.485 kb on + strand at 324.485 kb on + strand at 324.485 kb on + strand at 324.485 kb on + strand at 324.485 kb on + strand at 324.485 kb on + strand at 324.485 kb on + strand at 324.485 kb on + strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.486 kb on - strand at 324.487 kb on + strand at 324.488 kb on - strand at 324.488 kb on - strand at 324.586 kb on + strand at 324.586 kb on + strand at 324.587 kb on - strand at 324.587 kb on - strand at 324.587 kb on - strand at 324.600 kb on + strand at 324.600 kb on + strand at 324.600 kb on + strand at 324.600 kb on + strand at 324.600 kb on + strand at 324.600 kb on + strand at 324.601 kb on - strand at 324.601 kb on - strand at 324.601 kb on - strand at 324.601 kb on - strand at 324.601 kb on - strand at 324.601 kb on - strand at 324.601 kb on - strand at 324.601 kb on - strand at 324.601 kb on - strand at 324.601 kb on - strand at 324.652 kb on + strand at 324.653 kb on - strand at 324.653 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 321,683 + MPMX19_00317 0.49 -1.6 321,683 + MPMX19_00317 0.49 -1.2 321,683 + MPMX19_00317 0.49 -0.5 321,683 + MPMX19_00317 0.49 -0.6 321,683 + MPMX19_00317 0.49 -1.5 321,684 - MPMX19_00317 0.50 +0.8 321,684 - MPMX19_00317 0.50 -0.1 321,684 - MPMX19_00317 0.50 -2.0 321,684 - MPMX19_00317 0.50 -0.3 321,684 - MPMX19_00317 0.50 -1.8 321,684 - MPMX19_00317 0.50 -1.5 321,684 - MPMX19_00317 0.50 -0.3 321,684 - MPMX19_00317 0.50 -0.0 321,798 - MPMX19_00317 0.56 -2.0 321,854 + MPMX19_00317 0.59 +0.2 321,855 - MPMX19_00317 0.59 -1.1 321,892 + MPMX19_00317 0.62 +0.7 321,893 - MPMX19_00317 0.62 -0.9 321,955 + MPMX19_00317 0.65 +1.4 321,955 + MPMX19_00317 0.65 +1.8 321,955 + MPMX19_00317 0.65 -1.0 321,955 + MPMX19_00317 0.65 -1.3 321,956 - MPMX19_00317 0.65 +0.3 321,956 - MPMX19_00317 0.65 -0.8 321,956 - MPMX19_00317 0.65 +0.0 321,984 - MPMX19_00317 0.67 -0.8 321,984 - MPMX19_00317 0.67 -1.3 321,984 - MPMX19_00317 0.67 +0.5 322,109 + MPMX19_00317 0.74 -1.3 322,109 + MPMX19_00317 0.74 +0.5 322,109 + MPMX19_00317 0.74 -0.2 322,109 + MPMX19_00317 0.74 -1.2 322,109 + MPMX19_00317 0.74 -0.8 322,109 + MPMX19_00317 0.74 -0.2 322,109 + MPMX19_00317 0.74 -0.2 322,109 + MPMX19_00317 0.74 +0.5 322,109 + MPMX19_00317 0.74 +0.2 322,109 + MPMX19_00317 0.74 +0.1 322,109 + MPMX19_00317 0.74 +1.1 322,109 + MPMX19_00317 0.74 -1.6 322,110 - MPMX19_00317 0.74 -0.5 322,110 - MPMX19_00317 0.74 -0.0 322,110 - MPMX19_00317 0.74 +0.1 322,110 - MPMX19_00317 0.74 -0.9 322,110 - MPMX19_00317 0.74 +0.7 322,110 - MPMX19_00317 0.74 -1.0 322,110 - MPMX19_00317 0.74 -1.5 322,110 - MPMX19_00317 0.74 -1.0 322,110 - MPMX19_00317 0.74 +0.5 322,110 - MPMX19_00317 0.74 -0.3 322,110 - MPMX19_00317 0.74 -1.6 322,110 - MPMX19_00317 0.74 -0.0 322,110 - MPMX19_00317 0.74 -1.0 322,110 - MPMX19_00317 0.74 -0.2 322,110 - MPMX19_00317 0.74 -1.0 322,110 - MPMX19_00317 0.74 -0.7 322,110 - MPMX19_00317 0.74 +1.2 322,110 - MPMX19_00317 0.74 -1.5 322,110 - MPMX19_00317 0.74 -0.7 322,110 - MPMX19_00317 0.74 +0.6 322,110 - MPMX19_00317 0.74 +0.6 322,110 - MPMX19_00317 0.74 -2.0 322,110 - MPMX19_00317 0.74 -1.4 322,110 - MPMX19_00317 0.74 +0.5 322,110 - MPMX19_00317 0.74 +1.6 322,110 - MPMX19_00317 0.74 -0.6 322,448 + -1.3 322,448 + +1.8 322,448 + -1.1 322,448 + -0.7 322,448 + -0.4 322,448 + +0.3 322,448 + +1.1 322,448 + +0.8 322,448 + -0.4 322,448 + -1.5 322,448 + +0.0 322,448 + +0.4 322,448 + -0.0 322,448 + +0.8 322,448 + +0.1 322,448 + +0.8 322,448 + -0.8 322,448 + -0.4 322,448 + -0.0 322,448 + +1.2 322,448 + -2.0 322,449 - +0.8 322,449 - -0.0 322,449 - +0.4 322,449 - -1.8 322,449 - -1.8 322,449 - -0.5 322,449 - -0.3 322,449 - -2.8 322,449 - +0.2 322,449 - +0.9 322,449 - +0.2 322,449 - -0.5 322,449 - -0.5 322,449 - -0.6 322,449 - -0.6 322,449 - -0.5 322,449 - +0.8 322,449 - -0.2 322,449 - +1.0 322,449 - -2.3 322,449 - +0.5 322,449 - -3.1 322,449 - -1.4 322,600 + -2.6 322,600 + +0.4 322,600 + -0.6 322,601 - +0.1 322,601 - +0.0 322,601 - -2.2 322,601 - -0.8 322,601 - -0.0 322,690 + MPMX19_00318 0.10 +1.2 322,690 + MPMX19_00318 0.10 -0.9 322,690 + MPMX19_00318 0.10 +0.6 322,690 + MPMX19_00318 0.10 +0.0 322,690 + MPMX19_00318 0.10 +0.1 322,690 + MPMX19_00318 0.10 +0.0 322,690 + MPMX19_00318 0.10 +0.9 322,690 + MPMX19_00318 0.10 -1.1 322,690 + MPMX19_00318 0.10 -0.8 322,691 - MPMX19_00318 0.10 +0.8 322,691 - MPMX19_00318 0.10 -1.4 322,691 - MPMX19_00318 0.10 +0.1 322,691 - MPMX19_00318 0.10 -2.3 322,691 - MPMX19_00318 0.10 -0.8 322,691 - MPMX19_00318 0.10 +1.1 322,691 - MPMX19_00318 0.10 -0.8 322,691 - MPMX19_00318 0.10 +0.4 322,691 - MPMX19_00318 0.10 +1.0 322,691 - MPMX19_00318 0.10 -0.9 322,691 - MPMX19_00318 0.10 -0.5 322,691 - MPMX19_00318 0.10 -1.6 322,691 - MPMX19_00318 0.10 +0.2 323,070 + MPMX19_00318 0.39 +0.8 323,071 - MPMX19_00318 0.39 +1.5 323,071 - MPMX19_00318 0.39 -0.9 323,793 + -1.0 323,793 + +0.6 323,793 + -2.2 323,793 + -2.3 323,793 + -1.6 323,793 + -0.0 323,793 + -1.2 323,793 + -0.7 323,793 + +0.4 323,793 + +1.3 323,793 + -1.3 323,794 - +0.7 323,794 - +0.0 323,794 - +0.3 323,794 - +0.8 323,794 - -1.8 323,794 - -1.6 323,794 - -1.3 323,794 - +0.2 323,794 - +1.2 323,794 - -1.3 323,794 - +0.2 323,794 - +1.6 323,794 - +0.6 323,816 - -1.0 323,816 - -0.8 323,912 - +0.6 324,194 + MPMX19_00319 0.45 -1.1 324,485 + +0.3 324,485 + -0.6 324,485 + +0.2 324,485 + +0.8 324,485 + -1.3 324,485 + +0.8 324,485 + -0.2 324,485 + +0.2 324,485 + -1.9 324,485 + -1.3 324,485 + -1.3 324,485 + +0.4 324,486 - -1.3 324,486 - -1.1 324,486 - -2.9 324,486 - +0.5 324,486 - +0.8 324,486 - -0.4 324,486 - +0.2 324,486 - -1.6 324,486 - +0.2 324,486 - -0.3 324,486 - +0.1 324,486 - +0.8 324,486 - -0.4 324,487 + +2.0 324,488 - -0.3 324,488 - +1.2 324,586 + -0.2 324,586 + -2.2 324,587 - -0.1 324,587 - -0.3 324,587 - -0.5 324,600 + -0.2 324,600 + +0.2 324,600 + -0.2 324,600 + +0.2 324,600 + +0.6 324,600 + -2.2 324,601 - +0.2 324,601 - -0.2 324,601 - -1.3 324,601 - -0.2 324,601 - -1.6 324,601 - -0.8 324,601 - -1.2 324,601 - -0.4 324,601 - -1.1 324,601 - -1.3 324,652 + -0.4 324,653 - -0.8 324,653 - -0.7
Or see this region's nucleotide sequence