Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00158

Experiment: NL-CCM, start OD=0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00157 and MPMX19_00158 are separated by 7 nucleotidesMPMX19_00158 and MPMX19_00159 overlap by 8 nucleotides MPMX19_00157: MPMX19_00157 - hypothetical protein, at 167,119 to 167,931 _00157 MPMX19_00158: MPMX19_00158 - hypothetical protein, at 167,939 to 168,040 _00158 MPMX19_00159: MPMX19_00159 - hypothetical protein, at 168,033 to 169,055 _00159 Position (kb) 167 168 169Strain fitness (log2 ratio) -3 -2 -1 0 1at 167.084 kb on + strandat 167.085 kb on - strandat 167.085 kb on - strandat 167.085 kb on - strandat 167.091 kb on - strandat 167.136 kb on + strandat 167.136 kb on + strandat 167.136 kb on + strandat 167.136 kb on + strandat 167.137 kb on - strandat 167.137 kb on - strandat 167.137 kb on - strandat 167.151 kb on + strandat 167.152 kb on - strandat 167.152 kb on - strandat 167.152 kb on - strandat 167.184 kb on + strandat 167.185 kb on - strandat 167.185 kb on - strandat 167.185 kb on - strandat 167.185 kb on - strandat 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.250 kb on + strand, within MPMX19_00157at 167.251 kb on - strand, within MPMX19_00157at 167.251 kb on - strand, within MPMX19_00157at 167.251 kb on - strand, within MPMX19_00157at 167.251 kb on - strand, within MPMX19_00157at 167.251 kb on - strand, within MPMX19_00157at 167.251 kb on - strand, within MPMX19_00157at 167.251 kb on - strand, within MPMX19_00157at 167.251 kb on - strand, within MPMX19_00157at 167.268 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.296 kb on + strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.297 kb on - strand, within MPMX19_00157at 167.361 kb on + strand, within MPMX19_00157at 167.361 kb on + strand, within MPMX19_00157at 167.361 kb on + strand, within MPMX19_00157at 167.361 kb on + strand, within MPMX19_00157at 167.361 kb on + strand, within MPMX19_00157at 167.362 kb on - strand, within MPMX19_00157at 167.362 kb on - strand, within MPMX19_00157at 167.362 kb on - strand, within MPMX19_00157at 167.362 kb on - strand, within MPMX19_00157at 167.362 kb on - strand, within MPMX19_00157at 167.427 kb on + strand, within MPMX19_00157at 167.427 kb on + strand, within MPMX19_00157at 167.428 kb on - strand, within MPMX19_00157at 167.428 kb on - strand, within MPMX19_00157at 167.428 kb on - strand, within MPMX19_00157at 167.428 kb on - strand, within MPMX19_00157at 167.428 kb on - strand, within MPMX19_00157at 167.428 kb on - strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.452 kb on + strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.453 kb on - strand, within MPMX19_00157at 167.597 kb on + strand, within MPMX19_00157at 167.597 kb on + strand, within MPMX19_00157at 167.597 kb on + strand, within MPMX19_00157at 167.598 kb on - strand, within MPMX19_00157at 167.598 kb on - strand, within MPMX19_00157at 167.598 kb on - strand, within MPMX19_00157at 167.664 kb on + strand, within MPMX19_00157at 167.664 kb on + strand, within MPMX19_00157at 167.665 kb on - strand, within MPMX19_00157at 167.665 kb on - strand, within MPMX19_00157at 167.665 kb on - strand, within MPMX19_00157at 167.665 kb on - strand, within MPMX19_00157at 167.682 kb on + strand, within MPMX19_00157at 167.910 kb on - strandat 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.990 kb on + strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 167.991 kb on - strand, within MPMX19_00158at 168.016 kb on + strand, within MPMX19_00158at 168.106 kb on + strandat 168.106 kb on + strandat 168.106 kb on + strandat 168.106 kb on + strandat 168.106 kb on + strandat 168.106 kb on + strandat 168.107 kb on - strandat 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.204 kb on + strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.205 kb on - strand, within MPMX19_00159at 168.561 kb on - strand, within MPMX19_00159at 169.009 kb on + strandat 169.009 kb on + strandat 169.009 kb on + strandat 169.009 kb on + strandat 169.009 kb on + strandat 169.009 kb on + strandat 169.009 kb on + strandat 169.009 kb on + strandat 169.009 kb on + strandat 169.009 kb on + strandat 169.009 kb on + strandat 169.010 kb on - strandat 169.010 kb on - strandat 169.010 kb on - strandat 169.010 kb on - strandat 169.010 kb on - strandat 169.010 kb on - strandat 169.010 kb on - strandat 169.010 kb on - strandat 169.010 kb on - strandat 169.010 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1
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167,084 + -1.6
167,085 - -0.6
167,085 - -1.0
167,085 - -0.1
167,091 - +0.2
167,136 + -0.8
167,136 + -0.2
167,136 + -0.6
167,136 + -1.0
167,137 - +1.6
167,137 - -0.0
167,137 - -0.9
167,151 + -1.2
167,152 - -0.4
167,152 - +0.1
167,152 - -0.3
167,184 + -2.1
167,185 - -0.7
167,185 - +0.0
167,185 - +0.7
167,185 - -0.4
167,250 + MPMX19_00157 0.16 -0.1
167,250 + MPMX19_00157 0.16 -0.1
167,250 + MPMX19_00157 0.16 -0.8
167,250 + MPMX19_00157 0.16 -0.4
167,250 + MPMX19_00157 0.16 -0.3
167,250 + MPMX19_00157 0.16 -0.8
167,250 + MPMX19_00157 0.16 +0.9
167,250 + MPMX19_00157 0.16 -1.0
167,250 + MPMX19_00157 0.16 -0.7
167,250 + MPMX19_00157 0.16 +0.8
167,250 + MPMX19_00157 0.16 +0.9
167,250 + MPMX19_00157 0.16 +0.3
167,250 + MPMX19_00157 0.16 -0.4
167,250 + MPMX19_00157 0.16 -0.1
167,251 - MPMX19_00157 0.16 -1.4
167,251 - MPMX19_00157 0.16 -2.6
167,251 - MPMX19_00157 0.16 -1.8
167,251 - MPMX19_00157 0.16 -0.0
167,251 - MPMX19_00157 0.16 -1.1
167,251 - MPMX19_00157 0.16 -0.2
167,251 - MPMX19_00157 0.16 -0.3
167,251 - MPMX19_00157 0.16 -0.4
167,268 + MPMX19_00157 0.18 -0.1
167,296 + MPMX19_00157 0.22 +0.1
167,296 + MPMX19_00157 0.22 -1.9
167,296 + MPMX19_00157 0.22 -1.2
167,296 + MPMX19_00157 0.22 -0.3
167,296 + MPMX19_00157 0.22 +1.2
167,296 + MPMX19_00157 0.22 +0.5
167,296 + MPMX19_00157 0.22 -1.6
167,296 + MPMX19_00157 0.22 +1.4
167,296 + MPMX19_00157 0.22 -0.7
167,296 + MPMX19_00157 0.22 +0.3
167,296 + MPMX19_00157 0.22 -1.7
167,296 + MPMX19_00157 0.22 -1.7
167,296 + MPMX19_00157 0.22 -2.6
167,296 + MPMX19_00157 0.22 -2.0
167,296 + MPMX19_00157 0.22 -0.3
167,296 + MPMX19_00157 0.22 +1.5
167,296 + MPMX19_00157 0.22 -0.3
167,296 + MPMX19_00157 0.22 -0.6
167,296 + MPMX19_00157 0.22 -0.4
167,296 + MPMX19_00157 0.22 -0.4
167,296 + MPMX19_00157 0.22 -0.8
167,296 + MPMX19_00157 0.22 -0.8
167,297 - MPMX19_00157 0.22 -0.4
167,297 - MPMX19_00157 0.22 +0.3
167,297 - MPMX19_00157 0.22 -1.6
167,297 - MPMX19_00157 0.22 -0.7
167,297 - MPMX19_00157 0.22 +0.0
167,297 - MPMX19_00157 0.22 -1.4
167,297 - MPMX19_00157 0.22 -0.6
167,297 - MPMX19_00157 0.22 +0.1
167,297 - MPMX19_00157 0.22 -0.5
167,297 - MPMX19_00157 0.22 -1.0
167,297 - MPMX19_00157 0.22 -0.4
167,297 - MPMX19_00157 0.22 -0.4
167,297 - MPMX19_00157 0.22 -0.7
167,297 - MPMX19_00157 0.22 -1.6
167,297 - MPMX19_00157 0.22 -0.3
167,297 - MPMX19_00157 0.22 -0.0
167,361 + MPMX19_00157 0.30 -0.9
167,361 + MPMX19_00157 0.30 -1.1
167,361 + MPMX19_00157 0.30 -3.4
167,361 + MPMX19_00157 0.30 +0.5
167,361 + MPMX19_00157 0.30 -0.5
167,362 - MPMX19_00157 0.30 +0.2
167,362 - MPMX19_00157 0.30 -0.6
167,362 - MPMX19_00157 0.30 -2.3
167,362 - MPMX19_00157 0.30 -0.4
167,362 - MPMX19_00157 0.30 -0.4
167,427 + MPMX19_00157 0.38 -0.7
167,427 + MPMX19_00157 0.38 -0.2
167,428 - MPMX19_00157 0.38 +0.4
167,428 - MPMX19_00157 0.38 +0.5
167,428 - MPMX19_00157 0.38 -1.1
167,428 - MPMX19_00157 0.38 -0.1
167,428 - MPMX19_00157 0.38 +0.9
167,428 - MPMX19_00157 0.38 -0.0
167,452 + MPMX19_00157 0.41 -0.3
167,452 + MPMX19_00157 0.41 -0.7
167,452 + MPMX19_00157 0.41 -1.2
167,452 + MPMX19_00157 0.41 +1.2
167,452 + MPMX19_00157 0.41 +0.2
167,452 + MPMX19_00157 0.41 +0.7
167,452 + MPMX19_00157 0.41 +0.1
167,452 + MPMX19_00157 0.41 -1.1
167,452 + MPMX19_00157 0.41 -0.9
167,452 + MPMX19_00157 0.41 -0.5
167,452 + MPMX19_00157 0.41 -2.2
167,452 + MPMX19_00157 0.41 +0.2
167,452 + MPMX19_00157 0.41 -0.0
167,453 - MPMX19_00157 0.41 -0.3
167,453 - MPMX19_00157 0.41 -0.7
167,453 - MPMX19_00157 0.41 +0.2
167,453 - MPMX19_00157 0.41 +0.7
167,453 - MPMX19_00157 0.41 -0.9
167,453 - MPMX19_00157 0.41 -1.0
167,453 - MPMX19_00157 0.41 -0.5
167,453 - MPMX19_00157 0.41 +0.5
167,453 - MPMX19_00157 0.41 -2.1
167,453 - MPMX19_00157 0.41 +0.6
167,453 - MPMX19_00157 0.41 -0.8
167,453 - MPMX19_00157 0.41 -0.0
167,597 + MPMX19_00157 0.59 -0.3
167,597 + MPMX19_00157 0.59 -0.4
167,597 + MPMX19_00157 0.59 -0.9
167,598 - MPMX19_00157 0.59 -0.9
167,598 - MPMX19_00157 0.59 -2.8
167,598 - MPMX19_00157 0.59 -1.6
167,664 + MPMX19_00157 0.67 -0.8
167,664 + MPMX19_00157 0.67 +0.5
167,665 - MPMX19_00157 0.67 -1.1
167,665 - MPMX19_00157 0.67 -1.4
167,665 - MPMX19_00157 0.67 -0.5
167,665 - MPMX19_00157 0.67 -1.1
167,682 + MPMX19_00157 0.69 +0.3
167,910 - -0.0
167,990 + MPMX19_00158 0.50 +0.6
167,990 + MPMX19_00158 0.50 +0.1
167,990 + MPMX19_00158 0.50 -0.9
167,990 + MPMX19_00158 0.50 -0.2
167,990 + MPMX19_00158 0.50 +0.1
167,990 + MPMX19_00158 0.50 -0.6
167,990 + MPMX19_00158 0.50 -0.1
167,990 + MPMX19_00158 0.50 -1.3
167,990 + MPMX19_00158 0.50 +0.0
167,990 + MPMX19_00158 0.50 -0.3
167,990 + MPMX19_00158 0.50 +1.4
167,990 + MPMX19_00158 0.50 +0.6
167,990 + MPMX19_00158 0.50 -0.5
167,990 + MPMX19_00158 0.50 -1.1
167,990 + MPMX19_00158 0.50 +0.0
167,991 - MPMX19_00158 0.51 -0.9
167,991 - MPMX19_00158 0.51 -0.2
167,991 - MPMX19_00158 0.51 -0.1
167,991 - MPMX19_00158 0.51 -0.5
167,991 - MPMX19_00158 0.51 -0.3
167,991 - MPMX19_00158 0.51 -0.1
167,991 - MPMX19_00158 0.51 -2.1
167,991 - MPMX19_00158 0.51 +0.6
167,991 - MPMX19_00158 0.51 -1.1
167,991 - MPMX19_00158 0.51 +0.3
167,991 - MPMX19_00158 0.51 +0.8
167,991 - MPMX19_00158 0.51 -0.1
167,991 - MPMX19_00158 0.51 +0.0
167,991 - MPMX19_00158 0.51 -1.1
167,991 - MPMX19_00158 0.51 -0.1
167,991 - MPMX19_00158 0.51 +0.3
167,991 - MPMX19_00158 0.51 -0.8
168,016 + MPMX19_00158 0.75 -0.5
168,106 + -1.8
168,106 + -2.0
168,106 + -1.9
168,106 + -0.0
168,106 + -2.7
168,106 + -0.1
168,107 - +0.2
168,204 + MPMX19_00159 0.17 -0.7
168,204 + MPMX19_00159 0.17 -0.2
168,204 + MPMX19_00159 0.17 -1.4
168,204 + MPMX19_00159 0.17 -1.2
168,204 + MPMX19_00159 0.17 -2.4
168,204 + MPMX19_00159 0.17 +0.0
168,204 + MPMX19_00159 0.17 -1.1
168,204 + MPMX19_00159 0.17 +0.7
168,204 + MPMX19_00159 0.17 +0.4
168,204 + MPMX19_00159 0.17 -1.4
168,204 + MPMX19_00159 0.17 +0.3
168,204 + MPMX19_00159 0.17 -0.2
168,204 + MPMX19_00159 0.17 +0.6
168,204 + MPMX19_00159 0.17 -0.3
168,205 - MPMX19_00159 0.17 -2.3
168,205 - MPMX19_00159 0.17 -1.9
168,205 - MPMX19_00159 0.17 +1.1
168,205 - MPMX19_00159 0.17 +0.1
168,205 - MPMX19_00159 0.17 +1.5
168,205 - MPMX19_00159 0.17 +1.5
168,205 - MPMX19_00159 0.17 -0.6
168,205 - MPMX19_00159 0.17 +0.2
168,205 - MPMX19_00159 0.17 -0.2
168,205 - MPMX19_00159 0.17 +1.2
168,205 - MPMX19_00159 0.17 +0.3
168,205 - MPMX19_00159 0.17 +0.8
168,205 - MPMX19_00159 0.17 -0.2
168,205 - MPMX19_00159 0.17 -0.6
168,205 - MPMX19_00159 0.17 +1.5
168,561 - MPMX19_00159 0.52 -0.4
169,009 + -0.7
169,009 + +0.7
169,009 + -0.4
169,009 + -0.8
169,009 + -0.2
169,009 + -0.8
169,009 + -0.6
169,009 + -0.8
169,009 + -0.7
169,009 + +0.5
169,009 + +0.2
169,010 - -0.1
169,010 - +0.5
169,010 - +0.3
169,010 - -1.3
169,010 - -1.3
169,010 - -1.6
169,010 - +0.4
169,010 - +1.2
169,010 - -0.9
169,010 - -1.1

Or see this region's nucleotide sequence