Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00097

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
104,046	-		MPMX19_00095	0.90	+0.6
104,485	+				-1.1
104,485	+				-0.4
104,485	+				+0.6
104,485	+				-0.6
104,486	-				-0.4
104,486	-				-1.7
104,486	-				-0.2
104,486	-				-0.4
104,512	-				-2.4
104,603	+		MPMX19_00096	0.22	+1.5
104,603	+		MPMX19_00096	0.22	+1.4
104,603	+		MPMX19_00096	0.22	-0.8
104,603	+		MPMX19_00096	0.22	-0.3
104,603	+		MPMX19_00096	0.22	-0.9
104,603	+		MPMX19_00096	0.22	-1.3
104,603	+		MPMX19_00096	0.22	+0.7
104,603	+		MPMX19_00096	0.22	-0.6
104,603	+		MPMX19_00096	0.22	+0.1
104,603	+		MPMX19_00096	0.22	+1.2
104,603	+		MPMX19_00096	0.22	-0.1
104,603	+		MPMX19_00096	0.22	-1.3
104,603	+		MPMX19_00096	0.22	-0.1
104,603	+		MPMX19_00096	0.22	+0.9
104,603	+		MPMX19_00096	0.22	-0.5
104,603	+		MPMX19_00096	0.22	-0.2
104,604	-		MPMX19_00096	0.22	-0.3
104,604	-		MPMX19_00096	0.22	-0.1
104,604	-		MPMX19_00096	0.22	+0.9
104,604	-		MPMX19_00096	0.22	+1.3
104,604	-		MPMX19_00096	0.22	-1.8
104,604	-		MPMX19_00096	0.22	-1.1
104,604	-		MPMX19_00096	0.22	+0.3
104,604	-		MPMX19_00096	0.22	+0.9
104,604	-		MPMX19_00096	0.22	+0.0
104,604	-		MPMX19_00096	0.22	+0.3
104,604	-		MPMX19_00096	0.22	+1.3
104,604	-		MPMX19_00096	0.22	-2.4
104,604	-		MPMX19_00096	0.22	+1.5
104,604	-		MPMX19_00096	0.22	-0.0
104,604	-		MPMX19_00096	0.22	+0.6
104,604	-		MPMX19_00096	0.22	+0.6
104,604	-		MPMX19_00096	0.22	+2.2
104,604	-		MPMX19_00096	0.22	-1.6
104,604	-		MPMX19_00096	0.22	-1.1
104,604	-		MPMX19_00096	0.22	+1.3
104,777	+		MPMX19_00096	0.58	+0.9
104,777	+		MPMX19_00096	0.58	-0.3
104,777	+		MPMX19_00096	0.58	-0.4
104,777	+		MPMX19_00096	0.58	+1.2
104,778	-		MPMX19_00096	0.58	+0.6
104,778	-		MPMX19_00096	0.58	-1.6
104,778	-		MPMX19_00096	0.58	+0.2
104,778	-		MPMX19_00096	0.58	-1.7
104,795	+		MPMX19_00096	0.62	+0.4
104,796	-		MPMX19_00096	0.62	+1.0
104,796	-		MPMX19_00096	0.62	-1.3
104,796	-		MPMX19_00096	0.62	-0.4
104,796	-		MPMX19_00096	0.62	-0.8
104,843	+		MPMX19_00096	0.72	-0.5
104,843	+		MPMX19_00096	0.72	-0.3
104,843	+		MPMX19_00096	0.72	-0.3
104,843	+		MPMX19_00096	0.72	-0.7
104,843	+		MPMX19_00096	0.72	-0.3
104,843	+		MPMX19_00096	0.72	+0.5
104,843	+		MPMX19_00096	0.72	-0.0
104,843	+		MPMX19_00096	0.72	+0.1
104,843	+		MPMX19_00096	0.72	+0.7
104,843	+		MPMX19_00096	0.72	-0.2
104,844	-		MPMX19_00096	0.72	-1.1
104,844	-		MPMX19_00096	0.72	-0.9
104,844	-		MPMX19_00096	0.72	-0.2
104,844	-		MPMX19_00096	0.72	-1.5
104,844	-		MPMX19_00096	0.72	+1.0
104,844	-		MPMX19_00096	0.72	+0.3
104,844	-		MPMX19_00096	0.72	-0.5
104,844	-		MPMX19_00096	0.72	-2.6
104,844	-		MPMX19_00096	0.72	-0.7
104,844	-		MPMX19_00096	0.72	+0.3
104,844	-		MPMX19_00096	0.72	+0.5
104,844	-		MPMX19_00096	0.72	-0.1
104,844	-		MPMX19_00096	0.72	+0.7
104,844	-		MPMX19_00096	0.72	-0.2
104,844	-		MPMX19_00096	0.72	-2.4
104,844	-		MPMX19_00096	0.72	-1.9
104,844	-		MPMX19_00096	0.72	-0.3
105,014	+				-0.4
105,014	+				-0.7
105,014	+				+0.9
105,014	+				-0.4
105,014	+				-1.8
105,014	+				-0.4
105,015	-				-0.1
105,015	-				+0.9
105,015	-				-0.8
105,015	-				-0.7
105,015	-				-1.9
105,015	-				-0.1
105,015	-				+0.3
105,044	+		MPMX19_00097	0.15	-1.6
105,044	+		MPMX19_00097	0.15	-1.1
105,044	+		MPMX19_00097	0.15	+1.1
105,044	+		MPMX19_00097	0.15	-1.3
105,044	+		MPMX19_00097	0.15	+0.7
105,045	-		MPMX19_00097	0.15	-1.0
105,045	-		MPMX19_00097	0.15	+1.7
105,045	-		MPMX19_00097	0.15	-1.9
105,045	-		MPMX19_00097	0.15	-0.4
105,045	-		MPMX19_00097	0.15	-1.1
105,045	-		MPMX19_00097	0.15	-0.6
105,045	-		MPMX19_00097	0.15	+0.9
105,045	-		MPMX19_00097	0.15	+1.0
105,065	+		MPMX19_00097	0.24	+0.2
105,065	+		MPMX19_00097	0.24	-0.4
105,065	+		MPMX19_00097	0.24	-0.4
105,065	+		MPMX19_00097	0.24	-1.0
105,065	+		MPMX19_00097	0.24	-1.2
105,065	+		MPMX19_00097	0.24	+0.8
105,065	+		MPMX19_00097	0.24	-1.8
105,066	-		MPMX19_00097	0.25	-0.0
105,066	-		MPMX19_00097	0.25	-0.3
105,066	-		MPMX19_00097	0.25	-1.1
105,066	-		MPMX19_00097	0.25	+0.9
105,066	-		MPMX19_00097	0.25	-0.9
105,066	-		MPMX19_00097	0.25	-0.9
105,128	+		MPMX19_00097	0.54	-0.4
105,128	+		MPMX19_00097	0.54	-1.6
105,128	+		MPMX19_00097	0.54	-0.4
105,128	+		MPMX19_00097	0.54	-0.6
105,128	+		MPMX19_00097	0.54	-0.3
105,128	+		MPMX19_00097	0.54	-0.1
105,129	-		MPMX19_00097	0.54	-1.5
105,129	-		MPMX19_00097	0.54	-0.5
105,129	-		MPMX19_00097	0.54	-1.1
105,129	-		MPMX19_00097	0.54	-0.7
105,338	+				+0.5
105,338	+				+0.9
105,338	+				-0.5
105,500	+		MPMX19_00098	0.14	+0.1
105,500	+		MPMX19_00098	0.14	-0.1
105,500	+		MPMX19_00098	0.14	+0.8
105,500	+		MPMX19_00098	0.14	-1.7
105,500	+		MPMX19_00098	0.14	+0.3
105,501	-		MPMX19_00098	0.14	-1.4
105,501	-		MPMX19_00098	0.14	-0.4
105,501	-		MPMX19_00098	0.14	-0.9
105,501	-		MPMX19_00098	0.14	-1.3
105,501	-		MPMX19_00098	0.14	+0.7
105,501	-		MPMX19_00098	0.14	-0.2
105,501	-		MPMX19_00098	0.14	-0.8
105,501	-		MPMX19_00098	0.14	-0.7
105,501	-		MPMX19_00098	0.14	-1.1
105,501	-		MPMX19_00098	0.14	+0.1
105,501	-		MPMX19_00098	0.14	+0.5
105,530	+		MPMX19_00098	0.16	-0.8
105,530	+		MPMX19_00098	0.16	-0.2
105,530	+		MPMX19_00098	0.16	+0.1
105,530	+		MPMX19_00098	0.16	+0.1
105,530	+		MPMX19_00098	0.16	-1.2
105,530	+		MPMX19_00098	0.16	-0.0
105,530	+		MPMX19_00098	0.16	-1.0
105,530	+		MPMX19_00098	0.16	-0.3
105,531	-		MPMX19_00098	0.16	-0.4
105,531	-		MPMX19_00098	0.16	+0.3
105,531	-		MPMX19_00098	0.16	+0.5
105,531	-		MPMX19_00098	0.16	-0.3
105,531	-		MPMX19_00098	0.16	+0.5
105,531	-		MPMX19_00098	0.16	-0.8
105,791	+		MPMX19_00098	0.38	-0.4
105,818	+		MPMX19_00098	0.40	+0.6
105,818	+		MPMX19_00098	0.40	+0.5
105,818	+		MPMX19_00098	0.40	+0.8
105,818	+		MPMX19_00098	0.40	-0.3
105,818	+		MPMX19_00098	0.40	-1.7
105,818	+		MPMX19_00098	0.40	-0.2
105,818	+		MPMX19_00098	0.40	-1.5
105,818	+		MPMX19_00098	0.40	-0.4
105,818	+		MPMX19_00098	0.40	-3.1
105,818	+		MPMX19_00098	0.40	-0.0
105,818	+		MPMX19_00098	0.40	+0.2
105,818	+		MPMX19_00098	0.40	-1.4
105,818	+		MPMX19_00098	0.40	-1.3
105,818	+		MPMX19_00098	0.40	+0.6
105,818	+		MPMX19_00098	0.40	-0.9
105,818	+		MPMX19_00098	0.40	-0.7
105,818	+		MPMX19_00098	0.40	-1.8
105,818	+		MPMX19_00098	0.40	+1.5
105,818	+		MPMX19_00098	0.40	+0.7
105,818	+		MPMX19_00098	0.40	+0.3
105,818	+		MPMX19_00098	0.40	-0.0
105,818	+		MPMX19_00098	0.40	+0.9
105,818	+		MPMX19_00098	0.40	+1.2
105,818	+		MPMX19_00098	0.40	-1.6
105,818	+		MPMX19_00098	0.40	-0.9
105,818	+		MPMX19_00098	0.40	-0.2
105,818	+		MPMX19_00098	0.40	-0.8
105,818	+		MPMX19_00098	0.40	-1.2
105,819	-		MPMX19_00098	0.40	-0.7
105,819	-		MPMX19_00098	0.40	-0.2
105,819	-		MPMX19_00098	0.40	-1.9
105,819	-		MPMX19_00098	0.40	+0.7
105,819	-		MPMX19_00098	0.40	+0.5
105,819	-		MPMX19_00098	0.40	+0.9
105,819	-		MPMX19_00098	0.40	-1.8
105,819	-		MPMX19_00098	0.40	-1.6
105,819	-		MPMX19_00098	0.40	-0.4
105,819	-		MPMX19_00098	0.40	-0.3
105,819	-		MPMX19_00098	0.40	-1.4
105,819	-		MPMX19_00098	0.40	-0.5
105,819	-		MPMX19_00098	0.40	+0.1
105,819	-		MPMX19_00098	0.40	-0.6
105,819	-		MPMX19_00098	0.40	-1.8
105,819	-		MPMX19_00098	0.40	-1.4
105,819	-		MPMX19_00098	0.40	-1.4
105,819	-		MPMX19_00098	0.40	-3.1
105,819	-		MPMX19_00098	0.40	-0.7
105,819	-		MPMX19_00098	0.40	-1.4
105,819	-		MPMX19_00098	0.40	+1.6
105,819	-		MPMX19_00098	0.40	-0.1
105,819	-		MPMX19_00098	0.40	+0.2
105,819	-		MPMX19_00098	0.40	+0.3
105,819	-		MPMX19_00098	0.40	+0.2
105,819	-		MPMX19_00098	0.40	+0.5
105,819	-		MPMX19_00098	0.40	-0.0
105,819	-		MPMX19_00098	0.40	-0.2
105,819	-		MPMX19_00098	0.40	-1.1
105,819	-		MPMX19_00098	0.40	-1.6
105,819	-		MPMX19_00098	0.40	-0.6
105,819	-		MPMX19_00098	0.40	-2.7
105,819	-		MPMX19_00098	0.40	-2.0
105,833	+		MPMX19_00098	0.42	+0.5
105,833	+		MPMX19_00098	0.42	-0.5
105,833	+		MPMX19_00098	0.42	-0.3
105,834	-		MPMX19_00098	0.42	-1.6
105,834	-		MPMX19_00098	0.42	-0.4
105,834	-		MPMX19_00098	0.42	-0.4
105,834	-		MPMX19_00098	0.42	-0.7
106,160	+		MPMX19_00098	0.69	+0.1
106,160	+		MPMX19_00098	0.69	+0.1
106,160	+		MPMX19_00098	0.69	+0.4
106,160	+		MPMX19_00098	0.69	-2.5
106,160	+		MPMX19_00098	0.69	-1.6
106,160	+		MPMX19_00098	0.69	+0.9
106,160	+		MPMX19_00098	0.69	-1.1
106,160	+		MPMX19_00098	0.69	+0.7
106,161	-		MPMX19_00098	0.69	+0.5
106,161	-		MPMX19_00098	0.69	+0.3
106,161	-		MPMX19_00098	0.69	-1.1
106,161	-		MPMX19_00098	0.69	-1.4
106,161	-		MPMX19_00098	0.69	-0.7
106,161	-		MPMX19_00098	0.69	-1.3
106,181	+		MPMX19_00098	0.71	-2.4
106,181	+		MPMX19_00098	0.71	+0.9
106,181	+		MPMX19_00098	0.71	-1.7
106,181	+		MPMX19_00098	0.71	-0.6
106,182	-		MPMX19_00098	0.71	+0.8
106,182	-		MPMX19_00098	0.71	+0.2
106,182	-		MPMX19_00098	0.71	-0.1
106,182	-		MPMX19_00098	0.71	-1.1