Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00025

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
29,944	+		MPMX19_00024	0.41	-0.5
29,944	+		MPMX19_00024	0.41	-0.9
29,944	+		MPMX19_00024	0.41	-0.7
29,945	-		MPMX19_00024	0.41	-0.6
29,945	-		MPMX19_00024	0.41	-0.5
29,945	-		MPMX19_00024	0.41	-0.5
29,945	-		MPMX19_00024	0.41	+0.7
29,945	-		MPMX19_00024	0.41	-0.9
29,945	-		MPMX19_00024	0.41	+0.9
30,016	-		MPMX19_00024	0.46	+0.2
30,481	+		MPMX19_00024	0.84	-0.7
30,481	+		MPMX19_00024	0.84	+2.9
30,482	-		MPMX19_00024	0.84	+0.5
30,707	+				-0.4
30,707	+				-0.8
30,707	+				-1.2
30,707	+				+0.3
30,707	+				-1.7
30,707	+				-1.8
30,707	+				-0.7
30,707	+				-1.0
30,707	+				-2.7
30,707	+				-1.0
30,707	+				+0.1
30,707	+				+0.3
30,707	+				-1.9
30,707	+				+0.4
30,707	+				+1.1
30,708	-				+0.9
30,708	-				-1.3
30,708	-				-0.5
30,708	-				-2.6
30,708	-				+0.6
30,708	-				-1.2
30,708	-				-1.4
30,708	-				-0.4
30,708	-				-2.2
30,708	-				-1.4
30,859	+				-0.2
30,859	+				-1.1
30,859	+				-0.1
30,859	+				-0.2
30,859	+				+0.6
30,859	+				-0.1
30,859	+				+0.9
30,860	-				+0.1
30,860	-				+0.5
30,860	-				-0.3
30,860	-				+0.1
30,860	-				+0.3
30,860	-				-0.3
30,860	-				-0.6
30,860	-				-1.4
30,860	-				-0.8
30,860	-				-0.4
30,860	-				-0.1
30,913	+		MPMX19_00025	0.24	-1.0
30,913	+		MPMX19_00025	0.24	-0.8
30,914	-		MPMX19_00025	0.24	-1.6
30,967	+		MPMX19_00025	0.44	+0.3
30,968	-		MPMX19_00025	0.45	-1.1
31,262	+				-0.4
31,262	+				-0.6
31,262	+				-0.1
31,262	+				-0.3
31,262	+				+0.4
31,262	+				+1.2
31,262	+				+1.4
31,262	+				-0.9
31,262	+				-1.9
31,262	+				-0.5
31,262	+				+0.3
31,262	+				-2.2
31,262	+				+0.6
31,263	-				+0.6
31,263	-				+0.7
31,263	-				-1.1
31,263	-				-0.1
31,263	-				-0.2
31,263	-				-0.1
31,263	-				-2.0
31,263	-				-0.1
31,263	-				+0.6
31,405	+				+1.0
31,405	+				-0.7
31,405	+				-0.9
31,405	+				-1.7
31,405	+				-0.2
31,406	-				-2.6
31,406	-				+1.4
31,406	-				+0.1
31,406	-				-0.0
31,406	-				+0.3
31,406	-				-1.0
31,438	+				-0.8
31,438	+				-1.2
31,438	+				-0.0
31,438	+				+0.2
31,439	-				-0.3
31,439	-				-0.2
31,439	-				-0.4
31,439	-				+0.4
31,439	-				+0.1
31,439	-				+1.0
31,439	-				+0.4
31,439	-				-1.6
31,439	-				-0.7
31,439	-				+0.1
31,439	-				+0.0
31,645	+		MPMX19_00026	0.29	-1.1
31,646	-		MPMX19_00026	0.29	-0.0
31,646	-		MPMX19_00026	0.29	-0.6
31,714	+		MPMX19_00026	0.36	+0.1
31,714	+		MPMX19_00026	0.36	-1.3
31,714	+		MPMX19_00026	0.36	+0.2
31,714	+		MPMX19_00026	0.36	-0.7
31,714	+		MPMX19_00026	0.36	-0.3
31,714	+		MPMX19_00026	0.36	-1.7
31,714	+		MPMX19_00026	0.36	+0.2
31,715	-		MPMX19_00026	0.36	-0.9
31,715	-		MPMX19_00026	0.36	-2.0
31,715	-		MPMX19_00026	0.36	+0.0
31,715	-		MPMX19_00026	0.36	-0.4
31,715	-		MPMX19_00026	0.36	+0.3
31,715	-		MPMX19_00026	0.36	-0.0
31,715	-		MPMX19_00026	0.36	-1.1
31,729	+		MPMX19_00026	0.37	-1.4
31,729	+		MPMX19_00026	0.37	-1.4
31,729	+		MPMX19_00026	0.37	-0.7
31,729	+		MPMX19_00026	0.37	-0.9
31,729	+		MPMX19_00026	0.37	-0.7
31,729	+		MPMX19_00026	0.37	+0.5
31,729	+		MPMX19_00026	0.37	+0.7
31,729	+		MPMX19_00026	0.37	-1.3
31,730	-		MPMX19_00026	0.37	-0.1
31,730	-		MPMX19_00026	0.37	-1.5
31,730	-		MPMX19_00026	0.37	-0.2
31,730	-		MPMX19_00026	0.37	-1.6
31,730	-		MPMX19_00026	0.37	-0.9
31,730	-		MPMX19_00026	0.37	+0.1
31,730	-		MPMX19_00026	0.37	+0.6
31,730	-		MPMX19_00026	0.37	-1.0
31,858	+		MPMX19_00026	0.51	-0.4
31,858	+		MPMX19_00026	0.51	+0.1
31,858	+		MPMX19_00026	0.51	+1.1
31,858	+		MPMX19_00026	0.51	-1.6
31,858	+		MPMX19_00026	0.51	-0.2
31,858	+		MPMX19_00026	0.51	+0.2
31,858	+		MPMX19_00026	0.51	-0.8
31,858	+		MPMX19_00026	0.51	-0.6
31,858	+		MPMX19_00026	0.51	+0.2
31,858	+		MPMX19_00026	0.51	-0.4
31,858	+		MPMX19_00026	0.51	-1.6
31,858	+		MPMX19_00026	0.51	-1.1
31,859	-		MPMX19_00026	0.51	-0.4
31,859	-		MPMX19_00026	0.51	-0.4
31,859	-		MPMX19_00026	0.51	+0.3
31,859	-		MPMX19_00026	0.51	+0.2
31,859	-		MPMX19_00026	0.51	+0.7
31,859	-		MPMX19_00026	0.51	-0.8
31,859	-		MPMX19_00026	0.51	-0.7
31,859	-		MPMX19_00026	0.51	-1.7
31,859	-		MPMX19_00026	0.51	-1.7